RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 NISCHQ9Y2I1 1504 aa27.7■■■□□ 2.02
SPTBN1-203ENST00000389980 CCDC180Q9P1Z9 1646 aa24.11■■□□□ 1.45
SPTBN1-203ENST00000389980 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
SPTBN1-203ENST00000389980 DCAF8L2P0C7V8 631 aa23.06■■□□□ 1.28
SPTBN1-203ENST00000389980 ABCC9O60706 1549 aa22.99■■□□□ 1.27
SPTBN1-203ENST00000389980 DCAF1Q9Y4B6 1507 aa22.81■■□□□ 1.24
SPTBN1-203ENST00000389980 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
SPTBN1-203ENST00000389980 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
SPTBN1-203ENST00000389980 NACADO15069 1562 aa22.47■■□□□ 1.19
SPTBN1-203ENST00000389980 RB1CC1Q8TDY2 1594 aa22.32■■□□□ 1.16
SPTBN1-203ENST00000389980 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
SPTBN1-203ENST00000389980 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
SPTBN1-203ENST00000389980 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
SPTBN1-203ENST00000389980 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
SPTBN1-203ENST00000389980 BICRAQ9NZM4 1560 aa21.7■■□□□ 1.06
SPTBN1-203ENST00000389980 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
SPTBN1-203ENST00000389980 RSF1Q96T23 1441 aaPredicted RBP21.5■■□□□ 1.03
SPTBN1-203ENST00000389980 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
SPTBN1-203ENST00000389980 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
SPTBN1-203ENST00000389980 SMARCA4P51532 1647 aa21.31■■□□□ 1
SPTBN1-203ENST00000389980 WIZO95785 1651 aa21.29■■□□□ 1
SPTBN1-203ENST00000389980 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
SPTBN1-203ENST00000389980 PEG3Q9GZU2 1588 aa20.99■□□□□ 0.95
SPTBN1-203ENST00000389980 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
SPTBN1-203ENST00000389980 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
SPTBN1-203ENST00000389980 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
SPTBN1-203ENST00000389980 BAZ1BQ9UIG0 1483 aaKnown RBP20.86■□□□□ 0.93
SPTBN1-203ENST00000389980 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.92
SPTBN1-203ENST00000389980 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
SPTBN1-203ENST00000389980 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.91
SPTBN1-203ENST00000389980 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
SPTBN1-203ENST00000389980 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
SPTBN1-203ENST00000389980 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
SPTBN1-203ENST00000389980 ABCC8Q09428 1581 aa20.43■□□□□ 0.86
SPTBN1-203ENST00000389980 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.86
SPTBN1-203ENST00000389980 CFTRP13569 1480 aa20.31■□□□□ 0.84
SPTBN1-203ENST00000389980 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
SPTBN1-203ENST00000389980 WRNQ14191 1432 aaPredicted RBP eCLIP20.23■□□□□ 0.83
SPTBN1-203ENST00000389980 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
SPTBN1-203ENST00000389980 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
SPTBN1-203ENST00000389980 NESP48681 1621 aa20.19■□□□□ 0.82
SPTBN1-203ENST00000389980 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
SPTBN1-203ENST00000389980 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
SPTBN1-203ENST00000389980 LAMC3Q9Y6N6 1575 aa20.06■□□□□ 0.8
SPTBN1-203ENST00000389980 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
SPTBN1-203ENST00000389980 CUX1P39880 1505 aa20.05■□□□□ 0.8
SPTBN1-203ENST00000389980 TOP2BQ02880 1626 aa20.05■□□□□ 0.8
SPTBN1-203ENST00000389980 SOGA1O94964 1423 aa20.03■□□□□ 0.8
SPTBN1-203ENST00000389980 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.8
SPTBN1-203ENST00000389980 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
SPTBN1-203ENST00000389980 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
SPTBN1-203ENST00000389980 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
SPTBN1-203ENST00000389980 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
SPTBN1-203ENST00000389980 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
SPTBN1-203ENST00000389980 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
SPTBN1-203ENST00000389980 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.77
SPTBN1-203ENST00000389980 EEA1Q15075 1411 aa19.83■□□□□ 0.77
SPTBN1-203ENST00000389980 TOPBP1Q92547 1522 aa19.83■□□□□ 0.76
SPTBN1-203ENST00000389980 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.76
SPTBN1-203ENST00000389980 URB2Q14146 1524 aaKnown RBP19.82■□□□□ 0.76
SPTBN1-203ENST00000389980 POLA1P09884 1462 aaPredicted RBP19.74■□□□□ 0.75
SPTBN1-203ENST00000389980 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
SPTBN1-203ENST00000389980 CUX2O14529 1486 aa19.7■□□□□ 0.74
SPTBN1-203ENST00000389980 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
SPTBN1-203ENST00000389980 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
SPTBN1-203ENST00000389980 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
SPTBN1-203ENST00000389980 KIF21BO75037 1637 aa19.62■□□□□ 0.73
SPTBN1-203ENST00000389980 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
SPTBN1-203ENST00000389980 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
SPTBN1-203ENST00000389980 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
SPTBN1-203ENST00000389980 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
SPTBN1-203ENST00000389980 WDR62O43379 1518 aa19.57■□□□□ 0.72
SPTBN1-203ENST00000389980 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
SPTBN1-203ENST00000389980 IGF1RP08069 1367 aa19.56■□□□□ 0.72
SPTBN1-203ENST00000389980 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
SPTBN1-203ENST00000389980 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
SPTBN1-203ENST00000389980 THOC2Q8NI27 1593 aaKnown RBP19.55■□□□□ 0.72
SPTBN1-203ENST00000389980 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
SPTBN1-203ENST00000389980 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
SPTBN1-203ENST00000389980 CEP162Q5TB80 1403 aa19.49■□□□□ 0.71
SPTBN1-203ENST00000389980 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
SPTBN1-203ENST00000389980 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
SPTBN1-203ENST00000389980 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
SPTBN1-203ENST00000389980 GAPVD1Q14C86 1478 aa19.45■□□□□ 0.7
SPTBN1-203ENST00000389980 RANGAP1P46060 587 aaPredicted RBP19.43■□□□□ 0.7
SPTBN1-203ENST00000389980 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.72e-7■■■■□ 19.7
SPTBN1-203ENST00000389980 IFT140Q96RY7 1462 aa19.42■□□□□ 0.7
SPTBN1-203ENST00000389980 ZNF608Q9ULD9 1512 aaPredicted RBP19.4■□□□□ 0.7
SPTBN1-203ENST00000389980 CUL7Q14999 1698 aa19.36■□□□□ 0.69
SPTBN1-203ENST00000389980 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
SPTBN1-203ENST00000389980 CLIP1P30622 1438 aa19.34■□□□□ 0.69
SPTBN1-203ENST00000389980 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
SPTBN1-203ENST00000389980 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
SPTBN1-203ENST00000389980 ADAMTS12P58397 1594 aa19.22■□□□□ 0.67
SPTBN1-203ENST00000389980 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
SPTBN1-203ENST00000389980 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
SPTBN1-203ENST00000389980 SNAPC4Q5SXM2 1469 aa19.2■□□□□ 0.66
SPTBN1-203ENST00000389980 CTTNBP2Q8WZ74 1663 aa19.18■□□□□ 0.66
SPTBN1-203ENST00000389980 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
SPTBN1-203ENST00000389980 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms