RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
CTTN-212ENST00000527962 ABCC9O60706 1549 aa35.54■■■■□ 3.28
CTTN-212ENST00000527962 CCDC180Q9P1Z9 1646 aa35.34■■■■□ 3.25
CTTN-212ENST00000527962 RB1CC1Q8TDY2 1594 aa33.8■■■■□ 3
CTTN-212ENST00000527962 NACADO15069 1562 aa33.54■■■□□ 2.96
CTTN-212ENST00000527962 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
CTTN-212ENST00000527962 DNAJC5BQ9UF47 199 aa33.44■■■□□ 2.94
CTTN-212ENST00000527962 PABPN1Q86U42 306 aaKnown RBP eCLIP33.12■■■□□ 2.89
CTTN-212ENST00000527962 MYO15BQ96JP2 1530 aa33.04■■■□□ 2.88
CTTN-212ENST00000527962 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
CTTN-212ENST00000527962 BICRAQ9NZM4 1560 aa32.68■■■□□ 2.82
CTTN-212ENST00000527962 ZCCHC6Q5VYS8 1495 aaKnown RBP32.57■■■□□ 2.8
CTTN-212ENST00000527962 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
CTTN-212ENST00000527962 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
CTTN-212ENST00000527962 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
CTTN-212ENST00000527962 CECR2Q9BXF3 1484 aa32.08■■■□□ 2.73
CTTN-212ENST00000527962 CC2D2AQ9P2K1 1620 aa32.05■■■□□ 2.72
CTTN-212ENST00000527962 EIF4G1Q04637 1599 aaKnown RBP31.97■■■□□ 2.71
CTTN-212ENST00000527962 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
CTTN-212ENST00000527962 DNAJC5Q9H3Z4 198 aa30.95■■■□□ 2.55
CTTN-212ENST00000527962 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
CTTN-212ENST00000527962 ERCC6Q03468 1493 aa30.8■■■□□ 2.52
CTTN-212ENST00000527962 SMARCA2P51531 1590 aa30.77■■■□□ 2.52
CTTN-212ENST00000527962 CUX2O14529 1486 aa30.76■■■□□ 2.51
CTTN-212ENST00000527962 SMARCA4P51532 1647 aa30.69■■■□□ 2.5
CTTN-212ENST00000527962 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
CTTN-212ENST00000527962 BAZ1AQ9NRL2 1556 aaPredicted RBP30.61■■■□□ 2.49
CTTN-212ENST00000527962 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
CTTN-212ENST00000527962 NESP48681 1621 aa30.44■■■□□ 2.46
CTTN-212ENST00000527962 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
CTTN-212ENST00000527962 MROH2BQ7Z745 1585 aa30.28■■■□□ 2.44
CTTN-212ENST00000527962 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
CTTN-212ENST00000527962 PDS5BQ9NTI5 1447 aa30.22■■■□□ 2.43
CTTN-212ENST00000527962 THOC2Q8NI27 1593 aaKnown RBP30.11■■■□□ 2.41
CTTN-212ENST00000527962 CADPSQ9ULU8 1353 aa30.06■■■□□ 2.4
CTTN-212ENST00000527962 KIF21AQ7Z4S6 1674 aa29.96■■■□□ 2.39
CTTN-212ENST00000527962 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
CTTN-212ENST00000527962 WIZO95785 1651 aa29.87■■■□□ 2.37
CTTN-212ENST00000527962 WDR62O43379 1518 aa29.76■■■□□ 2.35
CTTN-212ENST00000527962 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
CTTN-212ENST00000527962 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
CTTN-212ENST00000527962 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
CTTN-212ENST00000527962 CFTRP13569 1480 aa29.64■■■□□ 2.34
CTTN-212ENST00000527962 TOP2AP11388 1531 aaKnown RBP29.56■■■□□ 2.32
CTTN-212ENST00000527962 TRIM41Q8WV44 630 aa29.54■■■□□ 2.32
CTTN-212ENST00000527962 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
CTTN-212ENST00000527962 URB2Q14146 1524 aaKnown RBP29.37■■■□□ 2.29
CTTN-212ENST00000527962 CCDC88BA6NC98 1476 aa29.25■■■□□ 2.27
CTTN-212ENST00000527962 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
CTTN-212ENST00000527962 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
CTTN-212ENST00000527962 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
CTTN-212ENST00000527962 TOPBP1Q92547 1522 aa29.06■■■□□ 2.24
CTTN-212ENST00000527962 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
CTTN-212ENST00000527962 DNMBPQ6XZF7 1577 aa28.94■■■□□ 2.22
CTTN-212ENST00000527962 EIF4G3O43432 1585 aaKnown RBP28.84■■■□□ 2.21
CTTN-212ENST00000527962 RIMBP3CA6NJZ7 1639 aa28.84■■■□□ 2.21
CTTN-212ENST00000527962 RIMBP3BA6NNM3 1639 aa28.84■■■□□ 2.21
CTTN-212ENST00000527962 RIMBP3Q9UFD9 1639 aa28.84■■■□□ 2.21
CTTN-212ENST00000527962 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.22e-7■■■■■ 27.5
CTTN-212ENST00000527962 ARHGEF11O15085 1522 aa28.79■■■□□ 2.2
CTTN-212ENST00000527962 FBLN2P98095 1184 aa28.78■■■□□ 2.2
CTTN-212ENST00000527962 POLA1P09884 1462 aaPredicted RBP28.76■■■□□ 2.19
CTTN-212ENST00000527962 TARBP1Q13395 1621 aaKnown RBP28.76■■■□□ 2.19
CTTN-212ENST00000527962 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
CTTN-212ENST00000527962 SOGA1O94964 1423 aa28.71■■■□□ 2.19
CTTN-212ENST00000527962 RAD54L2Q9Y4B4 1467 aa28.65■■■□□ 2.18
CTTN-212ENST00000527962 TDRD9Q8NDG6 1382 aaKnown RBP28.64■■■□□ 2.18
CTTN-212ENST00000527962 CHD1O14646 1710 aa28.6■■■□□ 2.17
CTTN-212ENST00000527962 FGD5Q6ZNL6 1462 aa28.56■■■□□ 2.16
CTTN-212ENST00000527962 CHMP7Q8WUX9 453 aaPredicted RBP28.56■■■□□ 2.16
CTTN-212ENST00000527962 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
CTTN-212ENST00000527962 SNAPC4Q5SXM2 1469 aa28.5■■■□□ 2.15
CTTN-212ENST00000527962 TRHP20396 242 aaPredicted RBP28.49■■■□□ 2.15
CTTN-212ENST00000527962 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
CTTN-212ENST00000527962 CUX1P39880 1505 aa28.47■■■□□ 2.15
CTTN-212ENST00000527962 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
CTTN-212ENST00000527962 MAGI1Q96QZ7 1491 aaPredicted RBP28.46■■■□□ 2.15
CTTN-212ENST00000527962 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
CTTN-212ENST00000527962 SYNJ2O15056 1496 aa28.38■■■□□ 2.13
CTTN-212ENST00000527962 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
CTTN-212ENST00000527962 CLASP1Q7Z460 1538 aa28.33■■■□□ 2.13
CTTN-212ENST00000527962 GAPVD1Q14C86 1478 aa28.33■■■□□ 2.13
CTTN-212ENST00000527962 ABCA10Q8WWZ4 1543 aa28.25■■■□□ 2.11
CTTN-212ENST00000527962 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
CTTN-212ENST00000527962 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
CTTN-212ENST00000527962 ABCA5Q8WWZ7 1642 aa28.13■■■□□ 2.09
CTTN-212ENST00000527962 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
CTTN-212ENST00000527962 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
CTTN-212ENST00000527962 TOP2BQ02880 1626 aa27.99■■■□□ 2.07
CTTN-212ENST00000527962 NUP160Q12769 1436 aa27.96■■■□□ 2.07
CTTN-212ENST00000527962 ADAMTS12P58397 1594 aa27.95■■■□□ 2.07
CTTN-212ENST00000527962 BIVM-ERCC5R4GMW8 1640 aa27.95■■■□□ 2.06
CTTN-212ENST00000527962 ERICH3Q5RHP9 1530 aa27.9■■■□□ 2.06
CTTN-212ENST00000527962 CEP170Q5SW79 1584 aa27.88■■■□□ 2.05
CTTN-212ENST00000527962 ERCC6L2Q5T890 1561 aa27.83■■■□□ 2.05
CTTN-212ENST00000527962 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
CTTN-212ENST00000527962 SHROOM2Q13796 1616 aa27.78■■■□□ 2.04
CTTN-212ENST00000527962 JPH4Q96JJ6 628 aa27.77■■■□□ 2.04
CTTN-212ENST00000527962 PRG4Q92954 1404 aaPredicted RBP27.75■■■□□ 2.03
CTTN-212ENST00000527962 NPM1P06748 294 aaKnown RBP eCLIP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms