RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 NISCHQ9Y2I1 1504 aa51.6■■■■■ 5.85
UBE3C-209ENST00000611269 CCDC180Q9P1Z9 1646 aa45.39■■■■■ 4.86
UBE3C-209ENST00000611269 ABCC9O60706 1549 aa43.55■■■■■ 4.56
UBE3C-209ENST00000611269 ZCCHC6Q5VYS8 1495 aaKnown RBP43.2■■■■■ 4.51
UBE3C-209ENST00000611269 DCAF8L2P0C7V8 631 aa42.81■■■■■ 4.44
UBE3C-209ENST00000611269 DCAF1Q9Y4B6 1507 aa42.67■■■■■ 4.42
UBE3C-209ENST00000611269 MYO15BQ96JP2 1530 aa42.46■■■■■ 4.39
UBE3C-209ENST00000611269 NACADO15069 1562 aa42.43■■■■■ 4.38
UBE3C-209ENST00000611269 RB1CC1Q8TDY2 1594 aa42.25■■■■■ 4.35
UBE3C-209ENST00000611269 SCRIBQ14160 1630 aa41.61■■■■■ 4.25
UBE3C-209ENST00000611269 SHROOM4Q9ULL8 1493 aa41.52■■■■■ 4.24
UBE3C-209ENST00000611269 UNC13AQ9UPW8 1703 aa41.4■■■■■ 4.22
UBE3C-209ENST00000611269 BICRAQ9NZM4 1560 aa40.99■■■■■ 4.15
UBE3C-209ENST00000611269 PABPN1Q86U42 306 aaKnown RBP eCLIP40.9■■■■■ 4.14
UBE3C-209ENST00000611269 CECR2Q9BXF3 1484 aa40.15■■■■■ 4.02
UBE3C-209ENST00000611269 BAZ1AQ9NRL2 1556 aaPredicted RBP39.92■■■■□ 3.98
UBE3C-209ENST00000611269 SMARCA4P51532 1647 aa39.84■■■■□ 3.97
UBE3C-209ENST00000611269 MROH2BQ7Z745 1585 aa39.83■■■■□ 3.97
UBE3C-209ENST00000611269 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.96
UBE3C-209ENST00000611269 RSF1Q96T23 1441 aaPredicted RBP39.72■■■■□ 3.95
UBE3C-209ENST00000611269 SUPT5HO00267 1087 aaKnown RBP39.56■■■■□ 3.92
UBE3C-209ENST00000611269 WIZO95785 1651 aa39.48■■■■□ 3.91
UBE3C-209ENST00000611269 CC2D2AQ9P2K1 1620 aa39.42■■■■□ 3.9
UBE3C-209ENST00000611269 PEG3Q9GZU2 1588 aa39.39■■■■□ 3.9
UBE3C-209ENST00000611269 ATAD2BQ9ULI0 1458 aa39.36■■■■□ 3.89
UBE3C-209ENST00000611269 SMARCA2P51531 1590 aa39.33■■■■□ 3.89
UBE3C-209ENST00000611269 NCAPD3P42695 1498 aa39.15■■■■□ 3.86
UBE3C-209ENST00000611269 BAZ1BQ9UIG0 1483 aaKnown RBP39.1■■■■□ 3.85
UBE3C-209ENST00000611269 DNAJC5BQ9UF47 199 aa39.08■■■■□ 3.85
UBE3C-209ENST00000611269 TOP2AP11388 1531 aaKnown RBP39.05■■■■□ 3.84
UBE3C-209ENST00000611269 HMGXB3Q12766 1538 aa39.05■■■■□ 3.84
UBE3C-209ENST00000611269 CCDC88BA6NC98 1476 aa38.62■■■■□ 3.77
UBE3C-209ENST00000611269 CADPSQ9ULU8 1353 aa38.08■■■■□ 3.69
UBE3C-209ENST00000611269 CFTRP13569 1480 aa38.07■■■■□ 3.69
UBE3C-209ENST00000611269 NESP48681 1621 aa38■■■■□ 3.67
UBE3C-209ENST00000611269 LAMC3Q9Y6N6 1575 aa37.97■■■■□ 3.67
UBE3C-209ENST00000611269 PRDM2Q13029 1718 aa37.89■■■■□ 3.66
UBE3C-209ENST00000611269 FANCD2Q9BXW9 1451 aa37.67■■■■□ 3.62
UBE3C-209ENST00000611269 PDS5BQ9NTI5 1447 aa37.67■■■■□ 3.62
UBE3C-209ENST00000611269 KIF21AQ7Z4S6 1674 aa37.58■■■■□ 3.61
UBE3C-209ENST00000611269 ABCC8Q09428 1581 aa37.58■■■■□ 3.61
UBE3C-209ENST00000611269 CEP164Q9UPV0 1460 aa37.51■■■■□ 3.6
UBE3C-209ENST00000611269 CHIC1Q5VXU3 224 aa37.47■■■■□ 3.59
UBE3C-209ENST00000611269 ERCC6Q03468 1493 aa37.43■■■■□ 3.58
UBE3C-209ENST00000611269 WRNQ14191 1432 aaPredicted RBP eCLIP37.42■■■■□ 3.58
UBE3C-209ENST00000611269 SYNJ1O43426 1573 aa37.31■■■■□ 3.56
UBE3C-209ENST00000611269 CUX1P39880 1505 aa37.3■■■■□ 3.56
UBE3C-209ENST00000611269 TRIM41Q8WV44 630 aa37.26■■■■□ 3.56
UBE3C-209ENST00000611269 URB2Q14146 1524 aaKnown RBP37.25■■■■□ 3.55
UBE3C-209ENST00000611269 MRC2Q9UBG0 1479 aa37.24■■■■□ 3.55
UBE3C-209ENST00000611269 TOP2BQ02880 1626 aa37.23■■■■□ 3.55
UBE3C-209ENST00000611269 DNMBPQ6XZF7 1577 aa37.21■■■■□ 3.55
UBE3C-209ENST00000611269 BIVM-ERCC5R4GMW8 1640 aa37.2■■■■□ 3.55
UBE3C-209ENST00000611269 TOPBP1Q92547 1522 aa37.19■■■■□ 3.54
UBE3C-209ENST00000611269 THOC2Q8NI27 1593 aaKnown RBP37.16■■■■□ 3.54
UBE3C-209ENST00000611269 WDR62O43379 1518 aa37.09■■■■□ 3.53
UBE3C-209ENST00000611269 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.51
UBE3C-209ENST00000611269 POLA1P09884 1462 aaPredicted RBP36.94■■■■□ 3.5
UBE3C-209ENST00000611269 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
UBE3C-209ENST00000611269 SOGA1O94964 1423 aa36.8■■■■□ 3.48
UBE3C-209ENST00000611269 CUX2O14529 1486 aa36.78■■■■□ 3.48
UBE3C-209ENST00000611269 TARBP1Q13395 1621 aaKnown RBP36.71■■■■□ 3.47
UBE3C-209ENST00000611269 ABCA10Q8WWZ4 1543 aa36.67■■■■□ 3.46
UBE3C-209ENST00000611269 IFT140Q96RY7 1462 aa36.66■■■■□ 3.46
UBE3C-209ENST00000611269 WDR97A6NE52 1622 aa36.65■■■■□ 3.46
UBE3C-209ENST00000611269 RUSC2Q8N2Y8 1516 aa36.61■■■■□ 3.45
UBE3C-209ENST00000611269 FAM9AQ8IZU1 332 aaPredicted RBP36.54■■■■□ 3.44
UBE3C-209ENST00000611269 KIF27Q86VH2 1401 aa36.54■■■■□ 3.44
UBE3C-209ENST00000611269 TDRD9Q8NDG6 1382 aaKnown RBP36.51■■■■□ 3.43
UBE3C-209ENST00000611269 ZNF608Q9ULD9 1512 aaPredicted RBP36.49■■■■□ 3.43
UBE3C-209ENST00000611269 EEA1Q15075 1411 aa36.47■■■■□ 3.43
UBE3C-209ENST00000611269 ABCA5Q8WWZ7 1642 aa36.45■■■■□ 3.43
UBE3C-209ENST00000611269 AQRO60306 1485 aaKnown RBP eCLIP36.41■■■■□ 3.422e-7■■■■■ 39.8
UBE3C-209ENST00000611269 GAPVD1Q14C86 1478 aa36.4■■■■□ 3.42
UBE3C-209ENST00000611269 EIF4G3O43432 1585 aaKnown RBP36.38■■■■□ 3.41
UBE3C-209ENST00000611269 CSRNP3Q8WYN3 585 aa36.33■■■■□ 3.41
UBE3C-209ENST00000611269 IGF1RP08069 1367 aa36.28■■■■□ 3.4
UBE3C-209ENST00000611269 PBRM1Q86U86 1689 aa36.28■■■■□ 3.4
UBE3C-209ENST00000611269 ERICH3Q5RHP9 1530 aa36.23■■■■□ 3.39
UBE3C-209ENST00000611269 GRIN2BQ13224 1484 aa36.23■■■■□ 3.39
UBE3C-209ENST00000611269 CUL7Q14999 1698 aa36.11■■■■□ 3.37
UBE3C-209ENST00000611269 PRXQ9BXM0 1461 aa36.1■■■■□ 3.37
UBE3C-209ENST00000611269 CARMIL1Q5VZK9 1371 aa36.09■■■■□ 3.37
UBE3C-209ENST00000611269 SNAPC4Q5SXM2 1469 aa36.08■■■■□ 3.37
UBE3C-209ENST00000611269 KIF21BO75037 1637 aa36.07■■■■□ 3.36
UBE3C-209ENST00000611269 EHMT2Q96KQ7 1210 aa36.06■■■■□ 3.36
UBE3C-209ENST00000611269 ADAMTS12P58397 1594 aa36.03■■■■□ 3.36
UBE3C-209ENST00000611269 MAGI1Q96QZ7 1491 aaPredicted RBP36.01■■■■□ 3.36
UBE3C-209ENST00000611269 LOC105371045A0A1W2PR82 267 aa36.01■■■■□ 3.35
UBE3C-209ENST00000611269 RAPGEF2Q9Y4G8 1499 aa35.99■■■■□ 3.35
UBE3C-209ENST00000611269 FHAD1B1AJZ9 1412 aa35.98■■■■□ 3.35
UBE3C-209ENST00000611269 GOLGA3Q08378 1498 aa35.94■■■■□ 3.34
UBE3C-209ENST00000611269 SYNJ2O15056 1496 aa35.88■■■■□ 3.33
UBE3C-209ENST00000611269 CHMP7Q8WUX9 453 aaPredicted RBP35.81■■■■□ 3.32
UBE3C-209ENST00000611269 FBLN2P98095 1184 aa35.8■■■■□ 3.32
UBE3C-209ENST00000611269 UBTFP17480 764 aaKnown RBP35.8■■■■□ 3.32
UBE3C-209ENST00000611269 GRIN2AQ12879 1464 aa35.79■■■■□ 3.32
UBE3C-209ENST00000611269 CHD1O14646 1710 aa35.74■■■■□ 3.31
UBE3C-209ENST00000611269 TNIKQ9UKE5 1360 aa35.66■■■■□ 3.3
UBE3C-209ENST00000611269 CTTNBP2Q8WZ74 1663 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms