RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.69
PPFIA1-219ENST00000531657 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
PPFIA1-219ENST00000531657 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
PPFIA1-219ENST00000531657 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
PPFIA1-219ENST00000531657 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
PPFIA1-219ENST00000531657 ZCCHC6Q5VYS8 1495 aaKnown RBP16.2■□□□□ 0.18
PPFIA1-219ENST00000531657 ABCC9O60706 1549 aa16.14■□□□□ 0.17
PPFIA1-219ENST00000531657 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-219ENST00000531657 CHIC1Q5VXU3 224 aa16.04■□□□□ 0.16
PPFIA1-219ENST00000531657 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
PPFIA1-219ENST00000531657 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
PPFIA1-219ENST00000531657 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.12
PPFIA1-219ENST00000531657 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
PPFIA1-219ENST00000531657 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
PPFIA1-219ENST00000531657 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
PPFIA1-219ENST00000531657 PPARGC1BQ86YN6 1023 aaKnown RBP15.73■□□□□ 0.11
PPFIA1-219ENST00000531657 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
PPFIA1-219ENST00000531657 TRIM41Q8WV44 630 aa15.68■□□□□ 0.1
PPFIA1-219ENST00000531657 CECR2Q9BXF3 1484 aa15.5■□□□□ 0.07
PPFIA1-219ENST00000531657 RANGAP1P46060 587 aaPredicted RBP15.49■□□□□ 0.07
PPFIA1-219ENST00000531657 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
PPFIA1-219ENST00000531657 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
PPFIA1-219ENST00000531657 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
PPFIA1-219ENST00000531657 MROH2BQ7Z745 1585 aa15.25■□□□□ 0.03
PPFIA1-219ENST00000531657 HRCP23327 699 aa15.19■□□□□ 0.02
PPFIA1-219ENST00000531657 UBTFP17480 764 aaKnown RBP15.15■□□□□ 0.02
PPFIA1-219ENST00000531657 WIZO95785 1651 aa15.12■□□□□ 0.01
PPFIA1-219ENST00000531657 NACADO15069 1562 aa15.09■□□□□ 0.01
PPFIA1-219ENST00000531657 TRIM26Q12899 539 aaPredicted RBP15.07■□□□□ 0
PPFIA1-219ENST00000531657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
PPFIA1-219ENST00000531657 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
PPFIA1-219ENST00000531657 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
PPFIA1-219ENST00000531657 SOGA1O94964 1423 aa14.87□□□□□ -0.03
PPFIA1-219ENST00000531657 CCER1Q8TC90 406 aaPredicted RBP14.87□□□□□ -0.03
PPFIA1-219ENST00000531657 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
PPFIA1-219ENST00000531657 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
PPFIA1-219ENST00000531657 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
PPFIA1-219ENST00000531657 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
PPFIA1-219ENST00000531657 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
PPFIA1-219ENST00000531657 ITGAEP38570 1179 aa14.73□□□□□ -0.05
PPFIA1-219ENST00000531657 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
PPFIA1-219ENST00000531657 APLP2Q06481 763 aa14.68□□□□□ -0.06
PPFIA1-219ENST00000531657 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
PPFIA1-219ENST00000531657 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
PPFIA1-219ENST00000531657 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
PPFIA1-219ENST00000531657 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
PPFIA1-219ENST00000531657 BICRAQ9NZM4 1560 aa14.61□□□□□ -0.07
PPFIA1-219ENST00000531657 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
PPFIA1-219ENST00000531657 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
PPFIA1-219ENST00000531657 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
PPFIA1-219ENST00000531657 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
PPFIA1-219ENST00000531657 ATAD2BQ9ULI0 1458 aa14.55□□□□□ -0.08
PPFIA1-219ENST00000531657 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
PPFIA1-219ENST00000531657 YTHDC1Q96MU7 727 aaKnown RBP14.5□□□□□ -0.09
PPFIA1-219ENST00000531657 ZEB1P37275 1124 aaPredicted RBP14.44□□□□□ -0.1
PPFIA1-219ENST00000531657 RAPGEF2Q9Y4G8 1499 aa14.4□□□□□ -0.1
PPFIA1-219ENST00000531657 CLIP1P30622 1438 aa14.4□□□□□ -0.1
PPFIA1-219ENST00000531657 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
PPFIA1-219ENST00000531657 KANK4Q5T7N3 995 aaPredicted RBP14.37□□□□□ -0.11
PPFIA1-219ENST00000531657 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
PPFIA1-219ENST00000531657 GOLGA3Q08378 1498 aa14.34□□□□□ -0.11
PPFIA1-219ENST00000531657 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
PPFIA1-219ENST00000531657 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
PPFIA1-219ENST00000531657 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
PPFIA1-219ENST00000531657 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
PPFIA1-219ENST00000531657 NESP48681 1621 aa14.23□□□□□ -0.13
PPFIA1-219ENST00000531657 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
PPFIA1-219ENST00000531657 CUX2O14529 1486 aa14.22□□□□□ -0.13
PPFIA1-219ENST00000531657 FBLN2P98095 1184 aa14.21□□□□□ -0.13
PPFIA1-219ENST00000531657 HIRIP3Q9BW71 556 aaPredicted RBP14.18□□□□□ -0.14
PPFIA1-219ENST00000531657 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
PPFIA1-219ENST00000531657 EEA1Q15075 1411 aa14.17□□□□□ -0.14
PPFIA1-219ENST00000531657 KIF27Q86VH2 1401 aa14.15□□□□□ -0.14
PPFIA1-219ENST00000531657 RAD54L2Q9Y4B4 1467 aa14.14□□□□□ -0.15
PPFIA1-219ENST00000531657 CUX1P39880 1505 aa14.13□□□□□ -0.15
PPFIA1-219ENST00000531657 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
PPFIA1-219ENST00000531657 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
PPFIA1-219ENST00000531657 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
PPFIA1-219ENST00000531657 VPS8Q8N3P4 1428 aa14.1□□□□□ -0.15
PPFIA1-219ENST00000531657 SCAF1Q9H7N4 1312 aaKnown RBP14.09□□□□□ -0.15
PPFIA1-219ENST00000531657 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
PPFIA1-219ENST00000531657 CHIC2Q9UKJ5 165 aa14.08□□□□□ -0.16
PPFIA1-219ENST00000531657 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
PPFIA1-219ENST00000531657 MIER1Q8N108 512 aa14.07□□□□□ -0.16
PPFIA1-219ENST00000531657 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
PPFIA1-219ENST00000531657 IGF1RP08069 1367 aa14.05□□□□□ -0.16
PPFIA1-219ENST00000531657 ARAP1Q96P48 1450 aa14.05□□□□□ -0.16
PPFIA1-219ENST00000531657 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
PPFIA1-219ENST00000531657 SIN3AQ96ST3 1273 aa14.04□□□□□ -0.16
PPFIA1-219ENST00000531657 KIF21BO75037 1637 aa14.04□□□□□ -0.16
PPFIA1-219ENST00000531657 FGD5Q6ZNL6 1462 aa14.04□□□□□ -0.16
PPFIA1-219ENST00000531657 CFTRP13569 1480 aa14.03□□□□□ -0.16
PPFIA1-219ENST00000531657 FANCD2Q9BXW9 1451 aa14.02□□□□□ -0.17
PPFIA1-219ENST00000531657 FHOD3Q2V2M9 1422 aa14.01□□□□□ -0.17
PPFIA1-219ENST00000531657 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
PPFIA1-219ENST00000531657 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
PPFIA1-219ENST00000531657 RRP7BPQ9NSQ0 103 aa13.94□□□□□ -0.18
PPFIA1-219ENST00000531657 PRXQ9BXM0 1461 aa13.94□□□□□ -0.18
PPFIA1-219ENST00000531657 TRIM52Q96A61 297 aa13.93□□□□□ -0.18
PPFIA1-219ENST00000531657 ARHGAP35Q9NRY4 1499 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms