RNA–Protein interactions for RNA: ENST00000566337.5

SPIRE2-209, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 5

Gene SPIRE2, Length 1,369 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-209ENST00000566337 NISCHQ9Y2I1 1504 aa55.49■■■■■ 6.47
SPIRE2-209ENST00000566337 CCDC180Q9P1Z9 1646 aa49.46■■■■■ 5.51
SPIRE2-209ENST00000566337 ABCC9O60706 1549 aa48.64■■■■■ 5.38
SPIRE2-209ENST00000566337 RB1CC1Q8TDY2 1594 aa46.65■■■■■ 5.06
SPIRE2-209ENST00000566337 NACADO15069 1562 aa46.53■■■■■ 5.04
SPIRE2-209ENST00000566337 DCAF8L2P0C7V8 631 aa46.46■■■■■ 5.03
SPIRE2-209ENST00000566337 ZCCHC6Q5VYS8 1495 aaKnown RBP46.18■■■■■ 4.98
SPIRE2-209ENST00000566337 MYO15BQ96JP2 1530 aa46.14■■■■■ 4.98
SPIRE2-209ENST00000566337 DCAF1Q9Y4B6 1507 aa45.86■■■■■ 4.93
SPIRE2-209ENST00000566337 UNC13AQ9UPW8 1703 aa45.67■■■■■ 4.9
SPIRE2-209ENST00000566337 PABPN1Q86U42 306 aaKnown RBP eCLIP45.39■■■■■ 4.862e-6■■□□□ 12.2
SPIRE2-209ENST00000566337 BICRAQ9NZM4 1560 aa45.28■■■■■ 4.84
SPIRE2-209ENST00000566337 SCRIBQ14160 1630 aa45.14■■■■■ 4.82
SPIRE2-209ENST00000566337 DNAJC5BQ9UF47 199 aa44.84■■■■■ 4.77
SPIRE2-209ENST00000566337 SHROOM4Q9ULL8 1493 aa44.71■■■■■ 4.75
SPIRE2-209ENST00000566337 EIF4G1Q04637 1599 aaKnown RBP44.09■■■■■ 4.65
SPIRE2-209ENST00000566337 CC2D2AQ9P2K1 1620 aa43.99■■■■■ 4.63
SPIRE2-209ENST00000566337 CECR2Q9BXF3 1484 aa43.71■■■■■ 4.59
SPIRE2-209ENST00000566337 SMARCA4P51532 1647 aa43.13■■■■■ 4.49
SPIRE2-209ENST00000566337 BAZ1AQ9NRL2 1556 aaPredicted RBP43.02■■■■■ 4.48
SPIRE2-209ENST00000566337 ATAD2BQ9ULI0 1458 aa42.93■■■■■ 4.46
SPIRE2-209ENST00000566337 NCAPD3P42695 1498 aa42.91■■■■■ 4.46
SPIRE2-209ENST00000566337 SMARCA2P51531 1590 aa42.86■■■■■ 4.45
SPIRE2-209ENST00000566337 MROH2BQ7Z745 1585 aa42.78■■■■■ 4.44
SPIRE2-209ENST00000566337 HMGXB3Q12766 1538 aa42.72■■■■■ 4.43
SPIRE2-209ENST00000566337 PEG3Q9GZU2 1588 aa42.68■■■■■ 4.42
SPIRE2-209ENST00000566337 BAZ1BQ9UIG0 1483 aaKnown RBP42.58■■■■■ 4.41
SPIRE2-209ENST00000566337 WIZO95785 1651 aa42.33■■■■■ 4.37
SPIRE2-209ENST00000566337 RSF1Q96T23 1441 aaPredicted RBP42.17■■■■■ 4.34
SPIRE2-209ENST00000566337 NESP48681 1621 aa42.02■■■■■ 4.32
SPIRE2-209ENST00000566337 ERCC6Q03468 1493 aa41.93■■■■■ 4.3
SPIRE2-209ENST00000566337 LAMC3Q9Y6N6 1575 aa41.86■■■■■ 4.29
SPIRE2-209ENST00000566337 TOP2AP11388 1531 aaKnown RBP41.84■■■■■ 4.29
SPIRE2-209ENST00000566337 CADPSQ9ULU8 1353 aa41.66■■■■■ 4.26
SPIRE2-209ENST00000566337 KIF21AQ7Z4S6 1674 aa41.55■■■■■ 4.24
SPIRE2-209ENST00000566337 PDS5BQ9NTI5 1447 aa41.55■■■■■ 4.24
SPIRE2-209ENST00000566337 CUX2O14529 1486 aa41.54■■■■■ 4.24
SPIRE2-209ENST00000566337 THOC2Q8NI27 1593 aaKnown RBP41.45■■■■■ 4.23
SPIRE2-209ENST00000566337 CFTRP13569 1480 aa41.38■■■■■ 4.21
SPIRE2-209ENST00000566337 CCDC88BA6NC98 1476 aa41.34■■■■■ 4.21
SPIRE2-209ENST00000566337 FANCD2Q9BXW9 1451 aa41.21■■■■■ 4.19
SPIRE2-209ENST00000566337 CEP164Q9UPV0 1460 aa41.18■■■■■ 4.18
SPIRE2-209ENST00000566337 MRC2Q9UBG0 1479 aa41.18■■■■■ 4.18
SPIRE2-209ENST00000566337 PRDM2Q13029 1718 aa41.11■■■■■ 4.17
SPIRE2-209ENST00000566337 WDR62O43379 1518 aa41.06■■■■■ 4.16
SPIRE2-209ENST00000566337 DNAJC5Q9H3Z4 198 aa41.01■■■■■ 4.16
SPIRE2-209ENST00000566337 SUPT5HO00267 1087 aaKnown RBP40.94■■■■■ 4.14
SPIRE2-209ENST00000566337 URB2Q14146 1524 aaKnown RBP40.83■■■■■ 4.13
SPIRE2-209ENST00000566337 TOPBP1Q92547 1522 aa40.53■■■■■ 4.08
SPIRE2-209ENST00000566337 DNMBPQ6XZF7 1577 aa40.47■■■■■ 4.07
SPIRE2-209ENST00000566337 ABCC8Q09428 1581 aa40.46■■■■■ 4.07
SPIRE2-209ENST00000566337 IFT140Q96RY7 1462 aa40.32■■■■■ 4.04
SPIRE2-209ENST00000566337 ZNF608Q9ULD9 1512 aaPredicted RBP40.19■■■■■ 4.02
SPIRE2-209ENST00000566337 POLA1P09884 1462 aaPredicted RBP40.17■■■■■ 4.02
SPIRE2-209ENST00000566337 CUX1P39880 1505 aa40.15■■■■■ 4.02
SPIRE2-209ENST00000566337 TARBP1Q13395 1621 aaKnown RBP40.12■■■■■ 4.01
SPIRE2-209ENST00000566337 FGD5Q6ZNL6 1462 aa40.05■■■■■ 4
SPIRE2-209ENST00000566337 EIF4G3O43432 1585 aaKnown RBP40.04■■■■■ 4
SPIRE2-209ENST00000566337 RAD54L2Q9Y4B4 1467 aa40.01■■■■■ 4
SPIRE2-209ENST00000566337 SOGA1O94964 1423 aa39.97■■■■□ 3.99
SPIRE2-209ENST00000566337 AQRO60306 1485 aaKnown RBP eCLIP39.92■■■■□ 3.982e-6■■□□□ 13.6
SPIRE2-209ENST00000566337 TDRD9Q8NDG6 1382 aaKnown RBP39.8■■■■□ 3.96
SPIRE2-209ENST00000566337 WRNQ14191 1432 aaPredicted RBP eCLIP39.77■■■■□ 3.96
SPIRE2-209ENST00000566337 WDR97A6NE52 1622 aa39.76■■■■□ 3.96
SPIRE2-209ENST00000566337 OSCARQ8IYS5 282 aa39.75■■■■□ 3.95
SPIRE2-209ENST00000566337 BIVM-ERCC5R4GMW8 1640 aa39.75■■■■□ 3.95
SPIRE2-209ENST00000566337 SYNJ1O43426 1573 aa39.73■■■■□ 3.95
SPIRE2-209ENST00000566337 TOP2BQ02880 1626 aa39.73■■■■□ 3.95
SPIRE2-209ENST00000566337 ABCA10Q8WWZ4 1543 aa39.62■■■■□ 3.93
SPIRE2-209ENST00000566337 CHD1O14646 1710 aa39.6■■■■□ 3.93
SPIRE2-209ENST00000566337 SNAPC4Q5SXM2 1469 aa39.56■■■■□ 3.92
SPIRE2-209ENST00000566337 GRIN2BQ13224 1484 aa39.55■■■■□ 3.92
SPIRE2-209ENST00000566337 GAPVD1Q14C86 1478 aa39.52■■■■□ 3.92
SPIRE2-209ENST00000566337 ABCA5Q8WWZ7 1642 aa39.52■■■■□ 3.92
SPIRE2-209ENST00000566337 PBRM1Q86U86 1689 aa39.51■■■■□ 3.92
SPIRE2-209ENST00000566337 FBLN2P98095 1184 aa39.48■■■■□ 3.91
SPIRE2-209ENST00000566337 MAGI1Q96QZ7 1491 aaPredicted RBP39.47■■■■□ 3.91
SPIRE2-209ENST00000566337 CHMP7Q8WUX9 453 aaPredicted RBP39.32■■■■□ 3.88
SPIRE2-209ENST00000566337 SYNJ2O15056 1496 aa39.32■■■■□ 3.88
SPIRE2-209ENST00000566337 TRIM41Q8WV44 630 aa39.31■■■■□ 3.88
SPIRE2-209ENST00000566337 RIMBP3CA6NJZ7 1639 aa39.23■■■■□ 3.87
SPIRE2-209ENST00000566337 RIMBP3BA6NNM3 1639 aa39.23■■■■□ 3.87
SPIRE2-209ENST00000566337 RIMBP3Q9UFD9 1639 aa39.23■■■■□ 3.87
SPIRE2-209ENST00000566337 ADAMTS12P58397 1594 aa39.17■■■■□ 3.86
SPIRE2-209ENST00000566337 ARHGEF11O15085 1522 aa39.17■■■■□ 3.86
SPIRE2-209ENST00000566337 ERICH3Q5RHP9 1530 aa39.14■■■■□ 3.86
SPIRE2-209ENST00000566337 CLASP1Q7Z460 1538 aa39.13■■■■□ 3.85
SPIRE2-209ENST00000566337 GRIN2AQ12879 1464 aa39.05■■■■□ 3.84
SPIRE2-209ENST00000566337 FHAD1B1AJZ9 1412 aa39.04■■■■□ 3.84
SPIRE2-209ENST00000566337 KIF27Q86VH2 1401 aa38.94■■■■□ 3.82
SPIRE2-209ENST00000566337 CEP170Q5SW79 1584 aa38.89■■■■□ 3.82
SPIRE2-209ENST00000566337 NUP160Q12769 1436 aa38.88■■■■□ 3.81
SPIRE2-209ENST00000566337 ARAP1Q96P48 1450 aa38.85■■■■□ 3.81
SPIRE2-209ENST00000566337 IGF1RP08069 1367 aa38.81■■■■□ 3.8
SPIRE2-209ENST00000566337 CYB5RLQ6IPT4 315 aa38.8■■■■□ 3.8
SPIRE2-209ENST00000566337 CUL7Q14999 1698 aa38.76■■■■□ 3.8
SPIRE2-209ENST00000566337 SHROOM2Q13796 1616 aa38.64■■■■□ 3.78
SPIRE2-209ENST00000566337 RUSC2Q8N2Y8 1516 aa38.6■■■■□ 3.77
SPIRE2-209ENST00000566337 ERCC6L2Q5T890 1561 aa38.6■■■■□ 3.77
SPIRE2-209ENST00000566337 CARMIL1Q5VZK9 1371 aa38.59■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms