RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 NISCHQ9Y2I1 1504 aa42.12■■■■■ 4.33
CACNA2D4-211ENST00000540728 CCDC180Q9P1Z9 1646 aa37.75■■■■□ 3.63
CACNA2D4-211ENST00000540728 ABCC9O60706 1549 aa37.42■■■■□ 3.58
CACNA2D4-211ENST00000540728 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.32
CACNA2D4-211ENST00000540728 NACADO15069 1562 aa35.55■■■■□ 3.28
CACNA2D4-211ENST00000540728 DCAF8L2P0C7V8 631 aa35.43■■■■□ 3.26
CACNA2D4-211ENST00000540728 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
CACNA2D4-211ENST00000540728 ZCCHC6Q5VYS8 1495 aaKnown RBP35.02■■■■□ 3.2
CACNA2D4-211ENST00000540728 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
CACNA2D4-211ENST00000540728 PABPN1Q86U42 306 aaKnown RBP eCLIP34.82■■■■□ 3.16
CACNA2D4-211ENST00000540728 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
CACNA2D4-211ENST00000540728 DNAJC5BQ9UF47 199 aa34.65■■■■□ 3.14
CACNA2D4-211ENST00000540728 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
CACNA2D4-211ENST00000540728 SCRIBQ14160 1630 aa34.47■■■■□ 3.11
CACNA2D4-211ENST00000540728 SHROOM4Q9ULL8 1493 aa34.26■■■■□ 3.07
CACNA2D4-211ENST00000540728 EIF4G1Q04637 1599 aaKnown RBP33.82■■■■□ 3
CACNA2D4-211ENST00000540728 CC2D2AQ9P2K1 1620 aa33.82■■■■□ 3
CACNA2D4-211ENST00000540728 CECR2Q9BXF3 1484 aa33.66■■■□□ 2.98
CACNA2D4-211ENST00000540728 SMARCA4P51532 1647 aa32.85■■■□□ 2.85
CACNA2D4-211ENST00000540728 NCAPD3P42695 1498 aa32.75■■■□□ 2.83
CACNA2D4-211ENST00000540728 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
CACNA2D4-211ENST00000540728 BAZ1AQ9NRL2 1556 aaPredicted RBP32.73■■■□□ 2.83
CACNA2D4-211ENST00000540728 SMARCA2P51531 1590 aa32.72■■■□□ 2.83
CACNA2D4-211ENST00000540728 HMGXB3Q12766 1538 aa32.63■■■□□ 2.81
CACNA2D4-211ENST00000540728 BAZ1BQ9UIG0 1483 aaKnown RBP32.52■■■□□ 2.8
CACNA2D4-211ENST00000540728 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
CACNA2D4-211ENST00000540728 PEG3Q9GZU2 1588 aa32.47■■■□□ 2.79
CACNA2D4-211ENST00000540728 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
CACNA2D4-211ENST00000540728 NESP48681 1621 aa32.22■■■□□ 2.75
CACNA2D4-211ENST00000540728 WIZO95785 1651 aa32.14■■■□□ 2.74
CACNA2D4-211ENST00000540728 CUX2O14529 1486 aa32.1■■■□□ 2.73
CACNA2D4-211ENST00000540728 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
CACNA2D4-211ENST00000540728 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
CACNA2D4-211ENST00000540728 THOC2Q8NI27 1593 aaKnown RBP31.88■■■□□ 2.69
CACNA2D4-211ENST00000540728 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
CACNA2D4-211ENST00000540728 PDS5BQ9NTI5 1447 aa31.83■■■□□ 2.69
CACNA2D4-211ENST00000540728 CADPSQ9ULU8 1353 aa31.79■■■□□ 2.68
CACNA2D4-211ENST00000540728 TOP2AP11388 1531 aaKnown RBP31.77■■■□□ 2.68
CACNA2D4-211ENST00000540728 DNAJC5Q9H3Z4 198 aa31.6■■■□□ 2.65
CACNA2D4-211ENST00000540728 MRC2Q9UBG0 1479 aa31.58■■■□□ 2.65
CACNA2D4-211ENST00000540728 CEP164Q9UPV0 1460 aa31.53■■■□□ 2.64
CACNA2D4-211ENST00000540728 CFTRP13569 1480 aa31.51■■■□□ 2.63
CACNA2D4-211ENST00000540728 FANCD2Q9BXW9 1451 aa31.5■■■□□ 2.63
CACNA2D4-211ENST00000540728 WDR62O43379 1518 aa31.49■■■□□ 2.63
CACNA2D4-211ENST00000540728 PRDM2Q13029 1718 aa31.35■■■□□ 2.61
CACNA2D4-211ENST00000540728 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
CACNA2D4-211ENST00000540728 URB2Q14146 1524 aaKnown RBP31.2■■■□□ 2.59
CACNA2D4-211ENST00000540728 TOPBP1Q92547 1522 aa30.93■■■□□ 2.54
CACNA2D4-211ENST00000540728 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
CACNA2D4-211ENST00000540728 DNMBPQ6XZF7 1577 aa30.88■■■□□ 2.53
CACNA2D4-211ENST00000540728 IFT140Q96RY7 1462 aa30.86■■■□□ 2.53
CACNA2D4-211ENST00000540728 ABCC8Q09428 1581 aa30.85■■■□□ 2.53
CACNA2D4-211ENST00000540728 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
CACNA2D4-211ENST00000540728 EIF4G3O43432 1585 aaKnown RBP30.7■■■□□ 2.5
CACNA2D4-211ENST00000540728 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
CACNA2D4-211ENST00000540728 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
CACNA2D4-211ENST00000540728 OSCARQ8IYS5 282 aa30.6■■■□□ 2.49
CACNA2D4-211ENST00000540728 CUX1P39880 1505 aa30.52■■■□□ 2.48
CACNA2D4-211ENST00000540728 FGD5Q6ZNL6 1462 aa30.51■■■□□ 2.48
CACNA2D4-211ENST00000540728 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.476e-7■■■■■ 34.8
CACNA2D4-211ENST00000540728 RAD54L2Q9Y4B4 1467 aa30.5■■■□□ 2.47
CACNA2D4-211ENST00000540728 TRIM41Q8WV44 630 aa30.49■■■□□ 2.47
CACNA2D4-211ENST00000540728 SOGA1O94964 1423 aa30.47■■■□□ 2.47
CACNA2D4-211ENST00000540728 CHD1O14646 1710 aa30.41■■■□□ 2.46
CACNA2D4-211ENST00000540728 TDRD9Q8NDG6 1382 aaKnown RBP30.37■■■□□ 2.45
CACNA2D4-211ENST00000540728 WDR97A6NE52 1622 aa30.36■■■□□ 2.45
CACNA2D4-211ENST00000540728 RIMBP3CA6NJZ7 1639 aa30.29■■■□□ 2.44
CACNA2D4-211ENST00000540728 RIMBP3BA6NNM3 1639 aa30.29■■■□□ 2.44
CACNA2D4-211ENST00000540728 RIMBP3Q9UFD9 1639 aa30.29■■■□□ 2.44
CACNA2D4-211ENST00000540728 SNAPC4Q5SXM2 1469 aa30.28■■■□□ 2.44
CACNA2D4-211ENST00000540728 FBLN2P98095 1184 aa30.28■■■□□ 2.44
CACNA2D4-211ENST00000540728 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
CACNA2D4-211ENST00000540728 GRIN2BQ13224 1484 aa30.2■■■□□ 2.43
CACNA2D4-211ENST00000540728 PBRM1Q86U86 1689 aa30.2■■■□□ 2.42
CACNA2D4-211ENST00000540728 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
CACNA2D4-211ENST00000540728 ABCA10Q8WWZ4 1543 aa30.15■■■□□ 2.42
CACNA2D4-211ENST00000540728 BIVM-ERCC5R4GMW8 1640 aa30.14■■■□□ 2.42
CACNA2D4-211ENST00000540728 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
CACNA2D4-211ENST00000540728 ABCA5Q8WWZ7 1642 aa30.13■■■□□ 2.41
CACNA2D4-211ENST00000540728 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
CACNA2D4-211ENST00000540728 SYNJ1O43426 1573 aa30.12■■■□□ 2.41
CACNA2D4-211ENST00000540728 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
CACNA2D4-211ENST00000540728 SYNJ2O15056 1496 aa30.07■■■□□ 2.4
CACNA2D4-211ENST00000540728 CHMP7Q8WUX9 453 aaPredicted RBP30.07■■■□□ 2.4
CACNA2D4-211ENST00000540728 CLASP1Q7Z460 1538 aa30.01■■■□□ 2.39
CACNA2D4-211ENST00000540728 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
CACNA2D4-211ENST00000540728 ADAMTS12P58397 1594 aa29.91■■■□□ 2.38
CACNA2D4-211ENST00000540728 CYB5RLQ6IPT4 315 aa29.9■■■□□ 2.38
CACNA2D4-211ENST00000540728 GRIN2AQ12879 1464 aa29.83■■■□□ 2.37
CACNA2D4-211ENST00000540728 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
CACNA2D4-211ENST00000540728 FHAD1B1AJZ9 1412 aa29.76■■■□□ 2.35
CACNA2D4-211ENST00000540728 CEP170Q5SW79 1584 aa29.72■■■□□ 2.35
CACNA2D4-211ENST00000540728 NUP160Q12769 1436 aa29.67■■■□□ 2.34
CACNA2D4-211ENST00000540728 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
CACNA2D4-211ENST00000540728 SHROOM2Q13796 1616 aa29.54■■■□□ 2.32
CACNA2D4-211ENST00000540728 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
CACNA2D4-211ENST00000540728 TRHP20396 242 aaPredicted RBP29.52■■■□□ 2.32
CACNA2D4-211ENST00000540728 RUSC2Q8N2Y8 1516 aa29.49■■■□□ 2.31
CACNA2D4-211ENST00000540728 CUL7Q14999 1698 aa29.48■■■□□ 2.31
CACNA2D4-211ENST00000540728 IGF1RP08069 1367 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 988.7 ms