RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 NISCHQ9Y2I1 1504 aa48.96■■■■■ 5.43
CACNA2D4-215ENST00000542340 CCDC180Q9P1Z9 1646 aa43.54■■■■■ 4.56
CACNA2D4-215ENST00000542340 ABCC9O60706 1549 aa42.75■■■■■ 4.43
CACNA2D4-215ENST00000542340 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
CACNA2D4-215ENST00000542340 NACADO15069 1562 aa41.01■■■■■ 4.16
CACNA2D4-215ENST00000542340 DCAF8L2P0C7V8 631 aa40.98■■■■■ 4.15
CACNA2D4-215ENST00000542340 MYO15BQ96JP2 1530 aa40.76■■■■■ 4.12
CACNA2D4-215ENST00000542340 ZCCHC6Q5VYS8 1495 aaKnown RBP40.74■■■■■ 4.11
CACNA2D4-215ENST00000542340 DCAF1Q9Y4B6 1507 aa40.52■■■■■ 4.08
CACNA2D4-215ENST00000542340 UNC13AQ9UPW8 1703 aa40.05■■■■■ 4
CACNA2D4-215ENST00000542340 PABPN1Q86U42 306 aaKnown RBP eCLIP39.95■■■■□ 3.99
CACNA2D4-215ENST00000542340 BICRAQ9NZM4 1560 aa39.82■■■■□ 3.97
CACNA2D4-215ENST00000542340 SCRIBQ14160 1630 aa39.69■■■■□ 3.94
CACNA2D4-215ENST00000542340 SHROOM4Q9ULL8 1493 aa39.44■■■■□ 3.9
CACNA2D4-215ENST00000542340 DNAJC5BQ9UF47 199 aa39.39■■■■□ 3.9
CACNA2D4-215ENST00000542340 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
CACNA2D4-215ENST00000542340 CC2D2AQ9P2K1 1620 aa38.65■■■■□ 3.78
CACNA2D4-215ENST00000542340 CECR2Q9BXF3 1484 aa38.44■■■■□ 3.74
CACNA2D4-215ENST00000542340 SMARCA4P51532 1647 aa37.98■■■■□ 3.67
CACNA2D4-215ENST00000542340 BAZ1AQ9NRL2 1556 aaPredicted RBP37.95■■■■□ 3.67
CACNA2D4-215ENST00000542340 NCAPD3P42695 1498 aa37.87■■■■□ 3.65
CACNA2D4-215ENST00000542340 ATAD2BQ9ULI0 1458 aa37.85■■■■□ 3.65
CACNA2D4-215ENST00000542340 SMARCA2P51531 1590 aa37.79■■■■□ 3.64
CACNA2D4-215ENST00000542340 MROH2BQ7Z745 1585 aa37.72■■■■□ 3.63
CACNA2D4-215ENST00000542340 PEG3Q9GZU2 1588 aa37.64■■■■□ 3.62
CACNA2D4-215ENST00000542340 HMGXB3Q12766 1538 aa37.63■■■■□ 3.61
CACNA2D4-215ENST00000542340 BAZ1BQ9UIG0 1483 aaKnown RBP37.52■■■■□ 3.6
CACNA2D4-215ENST00000542340 RSF1Q96T23 1441 aaPredicted RBP37.27■■■■□ 3.56
CACNA2D4-215ENST00000542340 WIZO95785 1651 aa37.26■■■■□ 3.56
CACNA2D4-215ENST00000542340 NESP48681 1621 aa36.95■■■■□ 3.51
CACNA2D4-215ENST00000542340 TOP2AP11388 1531 aaKnown RBP36.89■■■■□ 3.5
CACNA2D4-215ENST00000542340 ERCC6Q03468 1493 aa36.86■■■■□ 3.49
CACNA2D4-215ENST00000542340 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
CACNA2D4-215ENST00000542340 CADPSQ9ULU8 1353 aa36.77■■■■□ 3.48
CACNA2D4-215ENST00000542340 PDS5BQ9NTI5 1447 aa36.65■■■■□ 3.46
CACNA2D4-215ENST00000542340 CUX2O14529 1486 aa36.54■■■■□ 3.44
CACNA2D4-215ENST00000542340 CFTRP13569 1480 aa36.5■■■■□ 3.43
CACNA2D4-215ENST00000542340 CCDC88BA6NC98 1476 aa36.48■■■■□ 3.43
CACNA2D4-215ENST00000542340 KIF21AQ7Z4S6 1674 aa36.45■■■■□ 3.43
CACNA2D4-215ENST00000542340 THOC2Q8NI27 1593 aaKnown RBP36.39■■■■□ 3.42
CACNA2D4-215ENST00000542340 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
CACNA2D4-215ENST00000542340 CEP164Q9UPV0 1460 aa36.27■■■■□ 3.4
CACNA2D4-215ENST00000542340 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
CACNA2D4-215ENST00000542340 SUPT5HO00267 1087 aaKnown RBP36.22■■■■□ 3.39
CACNA2D4-215ENST00000542340 WDR62O43379 1518 aa36.12■■■■□ 3.37
CACNA2D4-215ENST00000542340 PRDM2Q13029 1718 aa36.11■■■■□ 3.37
CACNA2D4-215ENST00000542340 URB2Q14146 1524 aaKnown RBP35.94■■■■□ 3.34
CACNA2D4-215ENST00000542340 ABCC8Q09428 1581 aa35.74■■■■□ 3.31
CACNA2D4-215ENST00000542340 TOPBP1Q92547 1522 aa35.71■■■■□ 3.31
CACNA2D4-215ENST00000542340 DNMBPQ6XZF7 1577 aa35.64■■■■□ 3.3
CACNA2D4-215ENST00000542340 DNAJC5Q9H3Z4 198 aa35.62■■■■□ 3.29
CACNA2D4-215ENST00000542340 IFT140Q96RY7 1462 aa35.54■■■■□ 3.28
CACNA2D4-215ENST00000542340 POLA1P09884 1462 aaPredicted RBP35.4■■■■□ 3.26
CACNA2D4-215ENST00000542340 CUX1P39880 1505 aa35.38■■■■□ 3.25
CACNA2D4-215ENST00000542340 ZNF608Q9ULD9 1512 aaPredicted RBP35.36■■■■□ 3.25
CACNA2D4-215ENST00000542340 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
CACNA2D4-215ENST00000542340 FGD5Q6ZNL6 1462 aa35.29■■■■□ 3.24
CACNA2D4-215ENST00000542340 SOGA1O94964 1423 aa35.28■■■■□ 3.24
CACNA2D4-215ENST00000542340 RAD54L2Q9Y4B4 1467 aa35.23■■■■□ 3.23
CACNA2D4-215ENST00000542340 EIF4G3O43432 1585 aaKnown RBP35.18■■■■□ 3.22
CACNA2D4-215ENST00000542340 AQRO60306 1485 aaKnown RBP eCLIP35.16■■■■□ 3.226e-7■■■■■ 34.8
CACNA2D4-215ENST00000542340 WRNQ14191 1432 aaPredicted RBP eCLIP35.14■■■■□ 3.22
CACNA2D4-215ENST00000542340 TDRD9Q8NDG6 1382 aaKnown RBP35.09■■■■□ 3.21
CACNA2D4-215ENST00000542340 OSCARQ8IYS5 282 aa35.05■■■■□ 3.2
CACNA2D4-215ENST00000542340 WDR97A6NE52 1622 aa35.05■■■■□ 3.2
CACNA2D4-215ENST00000542340 TOP2BQ02880 1626 aa35.04■■■■□ 3.2
CACNA2D4-215ENST00000542340 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
CACNA2D4-215ENST00000542340 SYNJ1O43426 1573 aa35■■■■□ 3.19
CACNA2D4-215ENST00000542340 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
CACNA2D4-215ENST00000542340 GRIN2BQ13224 1484 aa34.87■■■■□ 3.17
CACNA2D4-215ENST00000542340 GAPVD1Q14C86 1478 aa34.85■■■■□ 3.17
CACNA2D4-215ENST00000542340 SNAPC4Q5SXM2 1469 aa34.81■■■■□ 3.16
CACNA2D4-215ENST00000542340 MAGI1Q96QZ7 1491 aaPredicted RBP34.79■■■■□ 3.16
CACNA2D4-215ENST00000542340 ABCA5Q8WWZ7 1642 aa34.79■■■■□ 3.16
CACNA2D4-215ENST00000542340 FBLN2P98095 1184 aa34.78■■■■□ 3.16
CACNA2D4-215ENST00000542340 CHD1O14646 1710 aa34.74■■■■□ 3.15
CACNA2D4-215ENST00000542340 PBRM1Q86U86 1689 aa34.7■■■■□ 3.15
CACNA2D4-215ENST00000542340 CHMP7Q8WUX9 453 aaPredicted RBP34.69■■■■□ 3.14
CACNA2D4-215ENST00000542340 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
CACNA2D4-215ENST00000542340 ERICH3Q5RHP9 1530 aa34.54■■■■□ 3.12
CACNA2D4-215ENST00000542340 FHAD1B1AJZ9 1412 aa34.47■■■■□ 3.11
CACNA2D4-215ENST00000542340 ADAMTS12P58397 1594 aa34.46■■■■□ 3.11
CACNA2D4-215ENST00000542340 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
CACNA2D4-215ENST00000542340 ARHGEF11O15085 1522 aa34.41■■■■□ 3.1
CACNA2D4-215ENST00000542340 CLASP1Q7Z460 1538 aa34.41■■■■□ 3.1
CACNA2D4-215ENST00000542340 GRIN2AQ12879 1464 aa34.41■■■■□ 3.1
CACNA2D4-215ENST00000542340 RIMBP3CA6NJZ7 1639 aa34.41■■■■□ 3.1
CACNA2D4-215ENST00000542340 RIMBP3BA6NNM3 1639 aa34.41■■■■□ 3.1
CACNA2D4-215ENST00000542340 RIMBP3Q9UFD9 1639 aa34.41■■■■□ 3.1
CACNA2D4-215ENST00000542340 TRIM41Q8WV44 630 aa34.34■■■■□ 3.09
CACNA2D4-215ENST00000542340 IGF1RP08069 1367 aa34.32■■■■□ 3.08
CACNA2D4-215ENST00000542340 NUP160Q12769 1436 aa34.28■■■■□ 3.08
CACNA2D4-215ENST00000542340 CEP170Q5SW79 1584 aa34.21■■■■□ 3.07
CACNA2D4-215ENST00000542340 CUL7Q14999 1698 aa34.16■■■■□ 3.06
CACNA2D4-215ENST00000542340 CYB5RLQ6IPT4 315 aa34.15■■■■□ 3.06
CACNA2D4-215ENST00000542340 ARAP1Q96P48 1450 aa34.13■■■■□ 3.05
CACNA2D4-215ENST00000542340 CARMIL1Q5VZK9 1371 aa34.11■■■■□ 3.05
CACNA2D4-215ENST00000542340 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
CACNA2D4-215ENST00000542340 SHROOM2Q13796 1616 aa34■■■■□ 3.03
CACNA2D4-215ENST00000542340 JPH4Q96JJ6 628 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms