Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LYSMD3Q7Z3D4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
LYSMD3Q7Z3D4 AC133963.1-201ENST00000504166 1679 ntBASIC17.64■□□□□ 0.42
LYSMD3Q7Z3D4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LYSMD3Q7Z3D4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LYSMD3Q7Z3D4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 AC005104.2-201ENST00000427818 678 ntBASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 AC111152.3-201ENST00000569699 673 ntBASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 AC109462.3-201ENST00000573934 613 ntBASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 LINC01451-201ENST00000623792 534 ntBASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 HLA-J-201ENST00000462773 1622 ntBASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD3Q7Z3D4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AL049757.1-201ENST00000616842 1596 ntBASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AC103564.2-201ENST00000432853 1299 ntBASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AC124067.4-201ENST00000519691 2379 ntBASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD3Q7Z3D4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 LINC00896-202ENST00000609602 2128 ntBASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD3Q7Z3D4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms