RNA–Protein interactions for RNA: ENST00000535419.2

PGRMC1-202, Transcript of progesterone receptor membrane component 1, humanhuman

TSL 2 BASIC

Gene PGRMC1, Length 1,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGRMC1-202ENST00000535419 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
PGRMC1-202ENST00000535419 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
PGRMC1-202ENST00000535419 ZCCHC6Q5VYS8 1495 aaKnown RBP33.65■■■□□ 2.98
PGRMC1-202ENST00000535419 ABCC9O60706 1549 aa33.14■■■□□ 2.9
PGRMC1-202ENST00000535419 DCAF1Q9Y4B6 1507 aa33.13■■■□□ 2.89
PGRMC1-202ENST00000535419 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
PGRMC1-202ENST00000535419 MYO15BQ96JP2 1530 aa32.76■■■□□ 2.83
PGRMC1-202ENST00000535419 SHROOM4Q9ULL8 1493 aa32.64■■■□□ 2.81
PGRMC1-202ENST00000535419 NACADO15069 1562 aa32.6■■■□□ 2.81
PGRMC1-202ENST00000535419 RB1CC1Q8TDY2 1594 aa32.35■■■□□ 2.77
PGRMC1-202ENST00000535419 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
PGRMC1-202ENST00000535419 UNC13AQ9UPW8 1703 aa31.71■■■□□ 2.67
PGRMC1-202ENST00000535419 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
PGRMC1-202ENST00000535419 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
PGRMC1-202ENST00000535419 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
PGRMC1-202ENST00000535419 CECR2Q9BXF3 1484 aa31.13■■■□□ 2.57
PGRMC1-202ENST00000535419 RSF1Q96T23 1441 aaPredicted RBP31.04■■■□□ 2.56
PGRMC1-202ENST00000535419 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
PGRMC1-202ENST00000535419 MROH2BQ7Z745 1585 aa30.95■■■□□ 2.54
PGRMC1-202ENST00000535419 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
PGRMC1-202ENST00000535419 WIZO95785 1651 aa30.71■■■□□ 2.51
PGRMC1-202ENST00000535419 PEG3Q9GZU2 1588 aa30.45■■■□□ 2.46
PGRMC1-202ENST00000535419 EIF4G1Q04637 1599 aaKnown RBP30.42■■■□□ 2.46
PGRMC1-202ENST00000535419 TOP2AP11388 1531 aaKnown RBP30.39■■■□□ 2.46
PGRMC1-202ENST00000535419 SMARCA2P51531 1590 aa30.32■■■□□ 2.45
PGRMC1-202ENST00000535419 ATAD2BQ9ULI0 1458 aa30.32■■■□□ 2.44
PGRMC1-202ENST00000535419 BAZ1BQ9UIG0 1483 aaKnown RBP30.17■■■□□ 2.42
PGRMC1-202ENST00000535419 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
PGRMC1-202ENST00000535419 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
PGRMC1-202ENST00000535419 HMGXB3Q12766 1538 aa30.05■■■□□ 2.4
PGRMC1-202ENST00000535419 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
PGRMC1-202ENST00000535419 CHIC1Q5VXU3 224 aa29.97■■■□□ 2.39
PGRMC1-202ENST00000535419 TRIM41Q8WV44 630 aa29.49■■■□□ 2.31
PGRMC1-202ENST00000535419 ABCC8Q09428 1581 aa29.42■■■□□ 2.3
PGRMC1-202ENST00000535419 CFTRP13569 1480 aa29.39■■■□□ 2.3
PGRMC1-202ENST00000535419 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
PGRMC1-202ENST00000535419 PRDM2Q13029 1718 aa29.3■■■□□ 2.28
PGRMC1-202ENST00000535419 CADPSQ9ULU8 1353 aa29.29■■■□□ 2.28
PGRMC1-202ENST00000535419 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.27
PGRMC1-202ENST00000535419 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
PGRMC1-202ENST00000535419 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
PGRMC1-202ENST00000535419 NESP48681 1621 aa29.06■■■□□ 2.24
PGRMC1-202ENST00000535419 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
PGRMC1-202ENST00000535419 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
PGRMC1-202ENST00000535419 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
PGRMC1-202ENST00000535419 FAM9AQ8IZU1 332 aaPredicted RBP28.95■■■□□ 2.22
PGRMC1-202ENST00000535419 CUX1P39880 1505 aa28.95■■■□□ 2.22
PGRMC1-202ENST00000535419 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
PGRMC1-202ENST00000535419 SOGA1O94964 1423 aa28.84■■■□□ 2.21
PGRMC1-202ENST00000535419 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
PGRMC1-202ENST00000535419 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
PGRMC1-202ENST00000535419 EEA1Q15075 1411 aa28.79■■■□□ 2.2
PGRMC1-202ENST00000535419 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
PGRMC1-202ENST00000535419 DNMBPQ6XZF7 1577 aa28.73■■■□□ 2.19
PGRMC1-202ENST00000535419 RUSC2Q8N2Y8 1516 aa28.73■■■□□ 2.19
PGRMC1-202ENST00000535419 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
PGRMC1-202ENST00000535419 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
PGRMC1-202ENST00000535419 URB2Q14146 1524 aaKnown RBP28.62■■■□□ 2.17
PGRMC1-202ENST00000535419 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
PGRMC1-202ENST00000535419 EHMT2Q96KQ7 1210 aa28.55■■■□□ 2.16
PGRMC1-202ENST00000535419 POLA1P09884 1462 aaPredicted RBP28.52■■■□□ 2.16
PGRMC1-202ENST00000535419 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
PGRMC1-202ENST00000535419 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
PGRMC1-202ENST00000535419 CUX2O14529 1486 aa28.45■■■□□ 2.14
PGRMC1-202ENST00000535419 ERCC6Q03468 1493 aa28.44■■■□□ 2.14
PGRMC1-202ENST00000535419 KIF21BO75037 1637 aa28.43■■■□□ 2.14
PGRMC1-202ENST00000535419 RAD54L2Q9Y4B4 1467 aa28.42■■■□□ 2.14
PGRMC1-202ENST00000535419 GOLGA3Q08378 1498 aa28.39■■■□□ 2.14
PGRMC1-202ENST00000535419 ABCA10Q8WWZ4 1543 aa28.39■■■□□ 2.14
PGRMC1-202ENST00000535419 WDR62O43379 1518 aa28.35■■■□□ 2.13
PGRMC1-202ENST00000535419 WDR97A6NE52 1622 aa28.33■■■□□ 2.13
PGRMC1-202ENST00000535419 THOC2Q8NI27 1593 aaKnown RBP28.28■■■□□ 2.12
PGRMC1-202ENST00000535419 PRXQ9BXM0 1461 aa28.28■■■□□ 2.12
PGRMC1-202ENST00000535419 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
PGRMC1-202ENST00000535419 RAPGEF2Q9Y4G8 1499 aa28.26■■■□□ 2.12
PGRMC1-202ENST00000535419 UBTFP17480 764 aaKnown RBP28.26■■■□□ 2.11
PGRMC1-202ENST00000535419 ERICH3Q5RHP9 1530 aa28.25■■■□□ 2.11
PGRMC1-202ENST00000535419 TARBP1Q13395 1621 aaKnown RBP28.25■■■□□ 2.11
PGRMC1-202ENST00000535419 IGF1RP08069 1367 aa28.23■■■□□ 2.11
PGRMC1-202ENST00000535419 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
PGRMC1-202ENST00000535419 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
PGRMC1-202ENST00000535419 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
PGRMC1-202ENST00000535419 CEP162Q5TB80 1403 aa28.12■■■□□ 2.09
PGRMC1-202ENST00000535419 GAPVD1Q14C86 1478 aa28.11■■■□□ 2.09
PGRMC1-202ENST00000535419 CARMIL1Q5VZK9 1371 aa28.11■■■□□ 2.09
PGRMC1-202ENST00000535419 CUL7Q14999 1698 aa28.08■■■□□ 2.09
PGRMC1-202ENST00000535419 PBRM1Q86U86 1689 aa28■■■□□ 2.07
PGRMC1-202ENST00000535419 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.07
PGRMC1-202ENST00000535419 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
PGRMC1-202ENST00000535419 CLIP1P30622 1438 aa27.93■■■□□ 2.06
PGRMC1-202ENST00000535419 GRIN2BQ13224 1484 aa27.91■■■□□ 2.06
PGRMC1-202ENST00000535419 EIF4G3O43432 1585 aaKnown RBP27.91■■■□□ 2.06
PGRMC1-202ENST00000535419 RANGAP1P46060 587 aaPredicted RBP27.83■■■□□ 2.05
PGRMC1-202ENST00000535419 ADAMTS12P58397 1594 aa27.82■■■□□ 2.04
PGRMC1-202ENST00000535419 FHAD1B1AJZ9 1412 aa27.81■■■□□ 2.04
PGRMC1-202ENST00000535419 CTTNBP2Q8WZ74 1663 aa27.77■■■□□ 2.04
PGRMC1-202ENST00000535419 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
PGRMC1-202ENST00000535419 MAGI1Q96QZ7 1491 aaPredicted RBP27.69■■■□□ 2.02
PGRMC1-202ENST00000535419 VPS8Q8N3P4 1428 aa27.67■■■□□ 2.02
PGRMC1-202ENST00000535419 ARHGAP35Q9NRY4 1499 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms