RNA–Protein interactions for RNA: ENST00000618521.4

SH2B1-216, Transcript of SH2B adaptor protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH2B1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-216ENST00000618521 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
SH2B1-216ENST00000618521 CCDC180Q9P1Z9 1646 aa31.54■■■□□ 2.64
SH2B1-216ENST00000618521 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
SH2B1-216ENST00000618521 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
SH2B1-216ENST00000618521 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
SH2B1-216ENST00000618521 ABCC9O60706 1549 aa30.34■■■□□ 2.45
SH2B1-216ENST00000618521 DCAF1Q9Y4B6 1507 aa29.98■■■□□ 2.39
SH2B1-216ENST00000618521 SUPT5HO00267 1087 aaKnown RBP29.82■■■□□ 2.36
SH2B1-216ENST00000618521 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
SH2B1-216ENST00000618521 NACADO15069 1562 aa29.44■■■□□ 2.3
SH2B1-216ENST00000618521 MYO15BQ96JP2 1530 aa29.44■■■□□ 2.3
SH2B1-216ENST00000618521 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
SH2B1-216ENST00000618521 HRCP23327 699 aa29.21■■■□□ 2.27
SH2B1-216ENST00000618521 CHIC1Q5VXU3 224 aa28.96■■■□□ 2.23
SH2B1-216ENST00000618521 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.224e-6■□□□□ 10.2
SH2B1-216ENST00000618521 CECR2Q9BXF3 1484 aa28.81■■■□□ 2.2
SH2B1-216ENST00000618521 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
SH2B1-216ENST00000618521 RSF1Q96T23 1441 aaPredicted RBP28.72■■■□□ 2.19
SH2B1-216ENST00000618521 PPARGC1BQ86YN6 1023 aaKnown RBP28.7■■■□□ 2.18
SH2B1-216ENST00000618521 PCGF6Q9BYE7 350 aa28.58■■■□□ 2.17
SH2B1-216ENST00000618521 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
SH2B1-216ENST00000618521 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
SH2B1-216ENST00000618521 PELP1Q8IZL8 1130 aaKnown RBP28.4■■■□□ 2.14
SH2B1-216ENST00000618521 WIZO95785 1651 aa28.35■■■□□ 2.13
SH2B1-216ENST00000618521 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
SH2B1-216ENST00000618521 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
SH2B1-216ENST00000618521 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
SH2B1-216ENST00000618521 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
SH2B1-216ENST00000618521 SCAF1Q9H7N4 1312 aaKnown RBP27.8■■■□□ 2.04
SH2B1-216ENST00000618521 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
SH2B1-216ENST00000618521 CCDC88BA6NC98 1476 aa27.75■■■□□ 2.03
SH2B1-216ENST00000618521 ATAD2BQ9ULI0 1458 aa27.71■■■□□ 2.03
SH2B1-216ENST00000618521 TRIM26Q12899 539 aaPredicted RBP27.66■■■□□ 2.02
SH2B1-216ENST00000618521 SMARCA2P51531 1590 aa27.66■■■□□ 2.02
SH2B1-216ENST00000618521 FAM9AQ8IZU1 332 aaPredicted RBP27.65■■■□□ 2.02
SH2B1-216ENST00000618521 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
SH2B1-216ENST00000618521 BAZ1BQ9UIG0 1483 aaKnown RBP27.6■■■□□ 2.01
SH2B1-216ENST00000618521 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
SH2B1-216ENST00000618521 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
SH2B1-216ENST00000618521 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
SH2B1-216ENST00000618521 ZEB1P37275 1124 aaPredicted RBP27.3■■□□□ 1.96
SH2B1-216ENST00000618521 MYT1Q01538 1121 aa27.3■■□□□ 1.96
SH2B1-216ENST00000618521 NCAPD3P42695 1498 aa27.28■■□□□ 1.96
SH2B1-216ENST00000618521 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.95
SH2B1-216ENST00000618521 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
SH2B1-216ENST00000618521 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
SH2B1-216ENST00000618521 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
SH2B1-216ENST00000618521 ACIN1Q9UKV3 1341 aaKnown RBP27.01■■□□□ 1.91
SH2B1-216ENST00000618521 SOGA1O94964 1423 aa26.99■■□□□ 1.91
SH2B1-216ENST00000618521 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
SH2B1-216ENST00000618521 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
SH2B1-216ENST00000618521 RUSC2Q8N2Y8 1516 aa26.92■■□□□ 1.9
SH2B1-216ENST00000618521 GTF3C3Q9Y5Q9 886 aa26.85■■□□□ 1.89
SH2B1-216ENST00000618521 CFTRP13569 1480 aa26.81■■□□□ 1.88
SH2B1-216ENST00000618521 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
SH2B1-216ENST00000618521 NESP48681 1621 aa26.72■■□□□ 1.87
SH2B1-216ENST00000618521 CSRNP3Q8WYN3 585 aa26.71■■□□□ 1.87
SH2B1-216ENST00000618521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.64■■□□□ 1.85
SH2B1-216ENST00000618521 UBTFP17480 764 aaKnown RBP26.63■■□□□ 1.85
SH2B1-216ENST00000618521 CUX1P39880 1505 aa26.63■■□□□ 1.85
SH2B1-216ENST00000618521 CENPBP07199 599 aaPredicted RBP26.61■■□□□ 1.85
SH2B1-216ENST00000618521 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
SH2B1-216ENST00000618521 TTBK1Q5TCY1 1321 aaPredicted RBP26.56■■□□□ 1.84
SH2B1-216ENST00000618521 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
SH2B1-216ENST00000618521 CCER1Q8TC90 406 aaPredicted RBP26.54■■□□□ 1.84
SH2B1-216ENST00000618521 FANCD2Q9BXW9 1451 aa26.51■■□□□ 1.83
SH2B1-216ENST00000618521 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
SH2B1-216ENST00000618521 EEA1Q15075 1411 aa26.47■■□□□ 1.83
SH2B1-216ENST00000618521 DIEXFQ68CQ4 756 aaKnown RBP26.45■■□□□ 1.83
SH2B1-216ENST00000618521 CEP162Q5TB80 1403 aa26.43■■□□□ 1.82
SH2B1-216ENST00000618521 PRDM2Q13029 1718 aa26.41■■□□□ 1.82
SH2B1-216ENST00000618521 GOLGA3Q08378 1498 aa26.35■■□□□ 1.81
SH2B1-216ENST00000618521 RAPGEF2Q9Y4G8 1499 aa26.34■■□□□ 1.81
SH2B1-216ENST00000618521 FGD5Q6ZNL6 1462 aa26.34■■□□□ 1.81
SH2B1-216ENST00000618521 TNIKQ9UKE5 1360 aa26.33■■□□□ 1.8
SH2B1-216ENST00000618521 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
SH2B1-216ENST00000618521 CUX2O14529 1486 aa26.29■■□□□ 1.8
SH2B1-216ENST00000618521 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
SH2B1-216ENST00000618521 RAD54L2Q9Y4B4 1467 aa26.26■■□□□ 1.79
SH2B1-216ENST00000618521 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
SH2B1-216ENST00000618521 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
SH2B1-216ENST00000618521 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
SH2B1-216ENST00000618521 URB2Q14146 1524 aaKnown RBP26.18■■□□□ 1.78
SH2B1-216ENST00000618521 KIF21BO75037 1637 aa26.17■■□□□ 1.78
SH2B1-216ENST00000618521 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
SH2B1-216ENST00000618521 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
SH2B1-216ENST00000618521 DNMBPQ6XZF7 1577 aa26.14■■□□□ 1.78
SH2B1-216ENST00000618521 YTHDC1Q96MU7 727 aaKnown RBP26.13■■□□□ 1.77
SH2B1-216ENST00000618521 PRXQ9BXM0 1461 aa26.09■■□□□ 1.77
SH2B1-216ENST00000618521 IGF1RP08069 1367 aa26.09■■□□□ 1.77
SH2B1-216ENST00000618521 CLIP1P30622 1438 aa26.07■■□□□ 1.76
SH2B1-216ENST00000618521 TDRD9Q8NDG6 1382 aaKnown RBP26.05■■□□□ 1.76
SH2B1-216ENST00000618521 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
SH2B1-216ENST00000618521 ERICH3Q5RHP9 1530 aa25.92■■□□□ 1.74
SH2B1-216ENST00000618521 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
SH2B1-216ENST00000618521 HNRNPUL2Q1KMD3 747 aaKnown RBP25.92■■□□□ 1.74
SH2B1-216ENST00000618521 ERCC6Q03468 1493 aa25.89■■□□□ 1.74
SH2B1-216ENST00000618521 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
SH2B1-216ENST00000618521 P3H3Q8IVL6 736 aa25.84■■□□□ 1.73
SH2B1-216ENST00000618521 MRC2Q9UBG0 1479 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms