RNA–Protein interactions for RNA: ENST00000370224.5

KCNQ2-207, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5 BASIC

Gene KCNQ2, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-207ENST00000370224 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
KCNQ2-207ENST00000370224 SHROOM4Q9ULL8 1493 aa30.13■■■□□ 2.41
KCNQ2-207ENST00000370224 SUPT5HO00267 1087 aaKnown RBP29.91■■■□□ 2.38
KCNQ2-207ENST00000370224 HRCP23327 699 aa29.25■■■□□ 2.27
KCNQ2-207ENST00000370224 PCGF6Q9BYE7 350 aa29.2■■■□□ 2.26
KCNQ2-207ENST00000370224 PPARGC1BQ86YN6 1023 aaKnown RBP29.07■■■□□ 2.24
KCNQ2-207ENST00000370224 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
KCNQ2-207ENST00000370224 CHIC1Q5VXU3 224 aa28.91■■■□□ 2.22
KCNQ2-207ENST00000370224 DCAF8L2P0C7V8 631 aa28.88■■■□□ 2.21
KCNQ2-207ENST00000370224 LOC105371045A0A1W2PR82 267 aa28.51■■■□□ 2.16
KCNQ2-207ENST00000370224 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
KCNQ2-207ENST00000370224 TRIM26Q12899 539 aaPredicted RBP28■■■□□ 2.07
KCNQ2-207ENST00000370224 EHMT2Q96KQ7 1210 aa27.97■■■□□ 2.07
KCNQ2-207ENST00000370224 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
KCNQ2-207ENST00000370224 FAM9AQ8IZU1 332 aaPredicted RBP27.8■■■□□ 2.04
KCNQ2-207ENST00000370224 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
KCNQ2-207ENST00000370224 SCAF1Q9H7N4 1312 aaKnown RBP27.62■■■□□ 2.01
KCNQ2-207ENST00000370224 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
KCNQ2-207ENST00000370224 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
KCNQ2-207ENST00000370224 PELP1Q8IZL8 1130 aaKnown RBP27.47■■□□□ 1.99
KCNQ2-207ENST00000370224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.19■■□□□ 1.94
KCNQ2-207ENST00000370224 TTBK1Q5TCY1 1321 aaPredicted RBP27.17■■□□□ 1.94
KCNQ2-207ENST00000370224 CCER1Q8TC90 406 aaPredicted RBP27.09■■□□□ 1.93
KCNQ2-207ENST00000370224 NEUROD1Q13562 356 aa27.05■■□□□ 1.92
KCNQ2-207ENST00000370224 ACIN1Q9UKV3 1341 aaKnown RBP26.97■■□□□ 1.91
KCNQ2-207ENST00000370224 GTF3C3Q9Y5Q9 886 aa26.92■■□□□ 1.9
KCNQ2-207ENST00000370224 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
KCNQ2-207ENST00000370224 DIEXFQ68CQ4 756 aaKnown RBP26.82■■□□□ 1.88
KCNQ2-207ENST00000370224 ABCC9O60706 1549 aa26.78■■□□□ 1.88
KCNQ2-207ENST00000370224 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
KCNQ2-207ENST00000370224 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
KCNQ2-207ENST00000370224 CENPBP07199 599 aaPredicted RBP26.73■■□□□ 1.87
KCNQ2-207ENST00000370224 YTHDC1Q96MU7 727 aaKnown RBP26.73■■□□□ 1.87
KCNQ2-207ENST00000370224 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
KCNQ2-207ENST00000370224 ZNF316A6NFI3 1004 aaPredicted RBP26.28■■□□□ 1.8
KCNQ2-207ENST00000370224 UBTFP17480 764 aaKnown RBP26.25■■□□□ 1.79
KCNQ2-207ENST00000370224 HNRNPUL2Q1KMD3 747 aaKnown RBP26.23■■□□□ 1.79
KCNQ2-207ENST00000370224 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
KCNQ2-207ENST00000370224 MIER1Q8N108 512 aa26.2■■□□□ 1.78
KCNQ2-207ENST00000370224 MYT1Q01538 1121 aa26.17■■□□□ 1.78
KCNQ2-207ENST00000370224 WIZO95785 1651 aa26.1■■□□□ 1.77
KCNQ2-207ENST00000370224 RANGAP1P46060 587 aaPredicted RBP26.09■■□□□ 1.77
KCNQ2-207ENST00000370224 CEP162Q5TB80 1403 aa26.07■■□□□ 1.76
KCNQ2-207ENST00000370224 ABCC8Q09428 1581 aa26.01■■□□□ 1.75
KCNQ2-207ENST00000370224 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
KCNQ2-207ENST00000370224 SOGA1O94964 1423 aa25.96■■□□□ 1.75
KCNQ2-207ENST00000370224 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
KCNQ2-207ENST00000370224 WRNQ14191 1432 aaPredicted RBP eCLIP25.82■■□□□ 1.72
KCNQ2-207ENST00000370224 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
KCNQ2-207ENST00000370224 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
KCNQ2-207ENST00000370224 APLP2Q06481 763 aa25.74■■□□□ 1.71
KCNQ2-207ENST00000370224 BAZ1AQ9NRL2 1556 aaPredicted RBP25.67■■□□□ 1.7
KCNQ2-207ENST00000370224 NACADO15069 1562 aa25.62■■□□□ 1.69
KCNQ2-207ENST00000370224 EIF4G1Q04637 1599 aaKnown RBP25.58■■□□□ 1.69
KCNQ2-207ENST00000370224 SUPT16HQ9Y5B9 1047 aaKnown RBP25.56■■□□□ 1.68
KCNQ2-207ENST00000370224 GOLGA3Q08378 1498 aa25.52■■□□□ 1.68
KCNQ2-207ENST00000370224 BCANQ96GW7 911 aa25.5■■□□□ 1.67
KCNQ2-207ENST00000370224 CLIP1P30622 1438 aa25.46■■□□□ 1.67
KCNQ2-207ENST00000370224 ITGAEP38570 1179 aa25.45■■□□□ 1.66
KCNQ2-207ENST00000370224 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
KCNQ2-207ENST00000370224 SMARCA2P51531 1590 aa25.39■■□□□ 1.65
KCNQ2-207ENST00000370224 EEA1Q15075 1411 aa25.38■■□□□ 1.65
KCNQ2-207ENST00000370224 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.65
KCNQ2-207ENST00000370224 KCNH8Q96L42 1107 aa25.36■■□□□ 1.65
KCNQ2-207ENST00000370224 TSHZ2Q9NRE2 1034 aa25.35■■□□□ 1.65
KCNQ2-207ENST00000370224 VPS8Q8N3P4 1428 aa25.26■■□□□ 1.63
KCNQ2-207ENST00000370224 SMARCA4P51532 1647 aa25.25■■□□□ 1.63
KCNQ2-207ENST00000370224 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
KCNQ2-207ENST00000370224 DHX57Q6P158 1386 aaKnown RBP25.21■■□□□ 1.63
KCNQ2-207ENST00000370224 KANK4Q5T7N3 995 aaPredicted RBP25.2■■□□□ 1.62
KCNQ2-207ENST00000370224 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
KCNQ2-207ENST00000370224 ANP32EQ9BTT0 268 aa25.18■■□□□ 1.62
KCNQ2-207ENST00000370224 FKBP8Q14318 412 aa25.16■■□□□ 1.62
KCNQ2-207ENST00000370224 CLSPNQ9HAW4 1339 aa25.09■■□□□ 1.61
KCNQ2-207ENST00000370224 HIRIP3Q9BW71 556 aaPredicted RBP25.08■■□□□ 1.61
KCNQ2-207ENST00000370224 DDX10Q13206 875 aaKnown RBP25.07■■□□□ 1.6
KCNQ2-207ENST00000370224 SYNJ1O43426 1573 aa25.06■■□□□ 1.6
KCNQ2-207ENST00000370224 KIF21BO75037 1637 aa25.01■■□□□ 1.59
KCNQ2-207ENST00000370224 TRIM52Q96A61 297 aa25■■□□□ 1.59
KCNQ2-207ENST00000370224 BCL11AQ9H165 835 aa24.99■■□□□ 1.59
KCNQ2-207ENST00000370224 NEFLP07196 543 aa24.93■■□□□ 1.58
KCNQ2-207ENST00000370224 SIN3AQ96ST3 1273 aa24.91■■□□□ 1.58
KCNQ2-207ENST00000370224 ATP1B4Q9UN42 357 aaPredicted RBP24.86■■□□□ 1.57
KCNQ2-207ENST00000370224 RBM19Q9Y4C8 960 aaKnown RBP24.83■■□□□ 1.57
KCNQ2-207ENST00000370224 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.57
KCNQ2-207ENST00000370224 FAM50AQ14320 339 aaKnown RBP24.82■■□□□ 1.56
KCNQ2-207ENST00000370224 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
KCNQ2-207ENST00000370224 RAB3GAP2Q9H2M9 1393 aa24.77■■□□□ 1.56
KCNQ2-207ENST00000370224 IRX6P78412 446 aaPredicted RBP24.77■■□□□ 1.56
KCNQ2-207ENST00000370224 ARAP1Q96P48 1450 aa24.76■■□□□ 1.55
KCNQ2-207ENST00000370224 UNC13AQ9UPW8 1703 aa24.75■■□□□ 1.55
KCNQ2-207ENST00000370224 ANP32CO43423 234 aa24.68■■□□□ 1.54
KCNQ2-207ENST00000370224 P3H3Q8IVL6 736 aa24.68■■□□□ 1.54
KCNQ2-207ENST00000370224 RRBP1Q9P2E9 1410 aaKnown RBP24.64■■□□□ 1.54
KCNQ2-207ENST00000370224 ERICH6Q7L0X2 663 aa24.59■■□□□ 1.53
KCNQ2-207ENST00000370224 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
KCNQ2-207ENST00000370224 ATAD2BQ9ULI0 1458 aa24.56■■□□□ 1.52
KCNQ2-207ENST00000370224 PPP1R15AO75807 674 aaPredicted RBP24.56■■□□□ 1.52
KCNQ2-207ENST00000370224 MSH5O43196 834 aa24.55■■□□□ 1.52
KCNQ2-207ENST00000370224 PRXQ9BXM0 1461 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms