RNA–Protein interactions for RNA: ENST00000263280.10

STRN4-201, Transcript of striatin 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STRN4, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-201ENST00000263280 NISCHQ9Y2I1 1504 aa35.69■■■■□ 3.3
STRN4-201ENST00000263280 SHROOM4Q9ULL8 1493 aa31.04■■■□□ 2.56
STRN4-201ENST00000263280 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
STRN4-201ENST00000263280 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
STRN4-201ENST00000263280 CCDC180Q9P1Z9 1646 aa29.97■■■□□ 2.39
STRN4-201ENST00000263280 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
STRN4-201ENST00000263280 MYO15BQ96JP2 1530 aa29.78■■■□□ 2.36
STRN4-201ENST00000263280 CHIC1Q5VXU3 224 aa29.74■■■□□ 2.35
STRN4-201ENST00000263280 HRCP23327 699 aa29.34■■■□□ 2.29
STRN4-201ENST00000263280 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
STRN4-201ENST00000263280 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
STRN4-201ENST00000263280 LOC105371045A0A1W2PR82 267 aa29.05■■■□□ 2.24
STRN4-201ENST00000263280 PPARGC1BQ86YN6 1023 aaKnown RBP28.93■■■□□ 2.22
STRN4-201ENST00000263280 ABCC9O60706 1549 aa28.57■■■□□ 2.16
STRN4-201ENST00000263280 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
STRN4-201ENST00000263280 RSF1Q96T23 1441 aaPredicted RBP28.46■■■□□ 2.15
STRN4-201ENST00000263280 TRIM26Q12899 539 aaPredicted RBP28.45■■■□□ 2.14
STRN4-201ENST00000263280 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
STRN4-201ENST00000263280 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
STRN4-201ENST00000263280 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
STRN4-201ENST00000263280 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.11
STRN4-201ENST00000263280 CECR2Q9BXF3 1484 aa28■■■□□ 2.07
STRN4-201ENST00000263280 MROH2BQ7Z745 1585 aa27.87■■■□□ 2.05
STRN4-201ENST00000263280 ZEB1P37275 1124 aaPredicted RBP27.81■■■□□ 2.04
STRN4-201ENST00000263280 WIZO95785 1651 aa27.74■■■□□ 2.03
STRN4-201ENST00000263280 NACADO15069 1562 aa27.72■■■□□ 2.03
STRN4-201ENST00000263280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.45■■□□□ 1.98
STRN4-201ENST00000263280 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
STRN4-201ENST00000263280 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
STRN4-201ENST00000263280 TTBK1Q5TCY1 1321 aaPredicted RBP27.35■■□□□ 1.97
STRN4-201ENST00000263280 SCAF1Q9H7N4 1312 aaKnown RBP27.35■■□□□ 1.97
STRN4-201ENST00000263280 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
STRN4-201ENST00000263280 CCER1Q8TC90 406 aaPredicted RBP27.29■■□□□ 1.96
STRN4-201ENST00000263280 CCDC88BA6NC98 1476 aa27.27■■□□□ 1.96
STRN4-201ENST00000263280 TOP2AP11388 1531 aaKnown RBP27.16■■□□□ 1.94
STRN4-201ENST00000263280 SOGA1O94964 1423 aa27.14■■□□□ 1.93
STRN4-201ENST00000263280 SMARCA4P51532 1647 aa27.1■■□□□ 1.93
STRN4-201ENST00000263280 SMARCA2P51531 1590 aa27.09■■□□□ 1.93
STRN4-201ENST00000263280 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
STRN4-201ENST00000263280 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
STRN4-201ENST00000263280 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
STRN4-201ENST00000263280 UBTFP17480 764 aaKnown RBP26.96■■□□□ 1.91
STRN4-201ENST00000263280 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
STRN4-201ENST00000263280 TNIKQ9UKE5 1360 aa26.93■■□□□ 1.9
STRN4-201ENST00000263280 NEUROD1Q13562 356 aa26.92■■□□□ 1.9
STRN4-201ENST00000263280 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
STRN4-201ENST00000263280 DIEXFQ68CQ4 756 aaKnown RBP26.92■■□□□ 1.9
STRN4-201ENST00000263280 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.891e-8■□□□□ 9.8
STRN4-201ENST00000263280 ACIN1Q9UKV3 1341 aaKnown RBP26.87■■□□□ 1.89
STRN4-201ENST00000263280 PELP1Q8IZL8 1130 aaKnown RBP26.79■■□□□ 1.88
STRN4-201ENST00000263280 EEA1Q15075 1411 aa26.75■■□□□ 1.87
STRN4-201ENST00000263280 GOLGA3Q08378 1498 aa26.71■■□□□ 1.87
STRN4-201ENST00000263280 GTF3C3Q9Y5Q9 886 aa26.66■■□□□ 1.86
STRN4-201ENST00000263280 HNRNPUL2Q1KMD3 747 aaKnown RBP26.63■■□□□ 1.85
STRN4-201ENST00000263280 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
STRN4-201ENST00000263280 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
STRN4-201ENST00000263280 CENPBP07199 599 aaPredicted RBP26.58■■□□□ 1.84
STRN4-201ENST00000263280 ZNF316A6NFI3 1004 aaPredicted RBP26.57■■□□□ 1.84
STRN4-201ENST00000263280 RANGAP1P46060 587 aaPredicted RBP26.56■■□□□ 1.84
STRN4-201ENST00000263280 CEP164Q9UPV0 1460 aa26.51■■□□□ 1.83
STRN4-201ENST00000263280 CLIP1P30622 1438 aa26.49■■□□□ 1.83
STRN4-201ENST00000263280 YTHDC1Q96MU7 727 aaKnown RBP26.46■■□□□ 1.83
STRN4-201ENST00000263280 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.83
STRN4-201ENST00000263280 RAPGEF2Q9Y4G8 1499 aa26.42■■□□□ 1.82
STRN4-201ENST00000263280 KIF21BO75037 1637 aa26.41■■□□□ 1.82
STRN4-201ENST00000263280 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
STRN4-201ENST00000263280 VPS8Q8N3P4 1428 aa26.37■■□□□ 1.81
STRN4-201ENST00000263280 MIER1Q8N108 512 aa26.36■■□□□ 1.81
STRN4-201ENST00000263280 APLP2Q06481 763 aa26.33■■□□□ 1.8
STRN4-201ENST00000263280 BAZ1BQ9UIG0 1483 aaKnown RBP26.32■■□□□ 1.8
STRN4-201ENST00000263280 TOP2BQ02880 1626 aa26.11■■□□□ 1.77
STRN4-201ENST00000263280 KANK4Q5T7N3 995 aaPredicted RBP26.1■■□□□ 1.77
STRN4-201ENST00000263280 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
STRN4-201ENST00000263280 DHX57Q6P158 1386 aaKnown RBP26.01■■□□□ 1.75
STRN4-201ENST00000263280 PRXQ9BXM0 1461 aa26■■□□□ 1.75
STRN4-201ENST00000263280 BIVM-ERCC5R4GMW8 1640 aa25.96■■□□□ 1.75
STRN4-201ENST00000263280 ERICH3Q5RHP9 1530 aa25.92■■□□□ 1.74
STRN4-201ENST00000263280 CUX1P39880 1505 aa25.89■■□□□ 1.74
STRN4-201ENST00000263280 ITGAEP38570 1179 aa25.86■■□□□ 1.73
STRN4-201ENST00000263280 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
STRN4-201ENST00000263280 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
STRN4-201ENST00000263280 RRBP1Q9P2E9 1410 aaKnown RBP25.79■■□□□ 1.72
STRN4-201ENST00000263280 ARHGAP35Q9NRY4 1499 aa25.75■■□□□ 1.71
STRN4-201ENST00000263280 NCAPD3P42695 1498 aa25.73■■□□□ 1.71
STRN4-201ENST00000263280 CCNB3Q8WWL7 1395 aa25.73■■□□□ 1.71
STRN4-201ENST00000263280 HMGXB3Q12766 1538 aa25.68■■□□□ 1.7
STRN4-201ENST00000263280 CFTRP13569 1480 aa25.66■■□□□ 1.7
STRN4-201ENST00000263280 CUX2O14529 1486 aa25.62■■□□□ 1.69
STRN4-201ENST00000263280 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
STRN4-201ENST00000263280 KCNH8Q96L42 1107 aa25.58■■□□□ 1.68
STRN4-201ENST00000263280 IGF1RP08069 1367 aa25.57■■□□□ 1.68
STRN4-201ENST00000263280 SUPT16HQ9Y5B9 1047 aaKnown RBP25.57■■□□□ 1.68
STRN4-201ENST00000263280 MAPKBP1O60336 1514 aa25.5■■□□□ 1.67
STRN4-201ENST00000263280 P3H3Q8IVL6 736 aa25.49■■□□□ 1.67
STRN4-201ENST00000263280 PHLDB1Q86UU1 1377 aa25.46■■□□□ 1.67
STRN4-201ENST00000263280 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
STRN4-201ENST00000263280 CARMIL1Q5VZK9 1371 aa25.46■■□□□ 1.67
STRN4-201ENST00000263280 TIAM1Q13009 1591 aa25.46■■□□□ 1.67
STRN4-201ENST00000263280 FAM50AQ14320 339 aaKnown RBP25.45■■□□□ 1.67
STRN4-201ENST00000263280 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms