RNA–Protein interactions for RNA: ENST00000510361.5

SDHA-213, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2 BASIC

Gene SDHA, Length 2,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-213ENST00000510361 NISCHQ9Y2I1 1504 aa39.47■■■■□ 3.91
SDHA-213ENST00000510361 CCDC180Q9P1Z9 1646 aa34.99■■■■□ 3.19
SDHA-213ENST00000510361 ABCC9O60706 1549 aa33.99■■■■□ 3.03
SDHA-213ENST00000510361 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
SDHA-213ENST00000510361 DCAF8L2P0C7V8 631 aa32.89■■■□□ 2.86
SDHA-213ENST00000510361 NACADO15069 1562 aa32.82■■■□□ 2.85
SDHA-213ENST00000510361 RB1CC1Q8TDY2 1594 aa32.81■■■□□ 2.84
SDHA-213ENST00000510361 MYO15BQ96JP2 1530 aa32.7■■■□□ 2.83
SDHA-213ENST00000510361 DCAF1Q9Y4B6 1507 aa32.67■■■□□ 2.82
SDHA-213ENST00000510361 UNC13AQ9UPW8 1703 aa32.1■■■□□ 2.73
SDHA-213ENST00000510361 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
SDHA-213ENST00000510361 SCRIBQ14160 1630 aa31.96■■■□□ 2.71
SDHA-213ENST00000510361 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
SDHA-213ENST00000510361 PABPN1Q86U42 306 aaKnown RBP eCLIP31.81■■■□□ 2.68
SDHA-213ENST00000510361 SUPT5HO00267 1087 aaKnown RBP31.21■■■□□ 2.59
SDHA-213ENST00000510361 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
SDHA-213ENST00000510361 EIF4G1Q04637 1599 aaKnown RBP30.95■■■□□ 2.55
SDHA-213ENST00000510361 CC2D2AQ9P2K1 1620 aa30.76■■■□□ 2.52
SDHA-213ENST00000510361 CECR2Q9BXF3 1484 aa30.72■■■□□ 2.51
SDHA-213ENST00000510361 SMARCA4P51532 1647 aa30.59■■■□□ 2.49
SDHA-213ENST00000510361 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
SDHA-213ENST00000510361 MROH2BQ7Z745 1585 aa30.43■■■□□ 2.46
SDHA-213ENST00000510361 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
SDHA-213ENST00000510361 SMARCA2P51531 1590 aa30.32■■■□□ 2.44
SDHA-213ENST00000510361 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
SDHA-213ENST00000510361 NCAPD3P42695 1498 aa30.28■■■□□ 2.44
SDHA-213ENST00000510361 PEG3Q9GZU2 1588 aa30.27■■■□□ 2.44
SDHA-213ENST00000510361 RSF1Q96T23 1441 aaPredicted RBP30.18■■■□□ 2.42
SDHA-213ENST00000510361 HMGXB3Q12766 1538 aa30.16■■■□□ 2.42
SDHA-213ENST00000510361 WIZO95785 1651 aa30.13■■■□□ 2.41
SDHA-213ENST00000510361 BAZ1BQ9UIG0 1483 aaKnown RBP30.11■■■□□ 2.41
SDHA-213ENST00000510361 TOP2AP11388 1531 aaKnown RBP29.81■■■□□ 2.36
SDHA-213ENST00000510361 NESP48681 1621 aa29.49■■■□□ 2.31
SDHA-213ENST00000510361 CCDC88BA6NC98 1476 aa29.46■■■□□ 2.31
SDHA-213ENST00000510361 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
SDHA-213ENST00000510361 CADPSQ9ULU8 1353 aa29.41■■■□□ 2.3
SDHA-213ENST00000510361 CFTRP13569 1480 aa29.3■■■□□ 2.28
SDHA-213ENST00000510361 ERCC6Q03468 1493 aa29.28■■■□□ 2.28
SDHA-213ENST00000510361 LOC105371045A0A1W2PR82 267 aa29.26■■■□□ 2.27
SDHA-213ENST00000510361 PDS5BQ9NTI5 1447 aa29.24■■■□□ 2.27
SDHA-213ENST00000510361 TRIM41Q8WV44 630 aa29.2■■■□□ 2.26
SDHA-213ENST00000510361 KIF21AQ7Z4S6 1674 aa29.17■■■□□ 2.26
SDHA-213ENST00000510361 PRDM2Q13029 1718 aa29.13■■■□□ 2.25
SDHA-213ENST00000510361 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
SDHA-213ENST00000510361 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
SDHA-213ENST00000510361 THOC2Q8NI27 1593 aaKnown RBP28.99■■■□□ 2.23
SDHA-213ENST00000510361 MRC2Q9UBG0 1479 aa28.92■■■□□ 2.22
SDHA-213ENST00000510361 CUX2O14529 1486 aa28.86■■■□□ 2.21
SDHA-213ENST00000510361 WDR62O43379 1518 aa28.83■■■□□ 2.21
SDHA-213ENST00000510361 FAM9AQ8IZU1 332 aaPredicted RBP28.8■■■□□ 2.2
SDHA-213ENST00000510361 URB2Q14146 1524 aaKnown RBP28.78■■■□□ 2.2
SDHA-213ENST00000510361 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
SDHA-213ENST00000510361 PCGF6Q9BYE7 350 aa28.7■■■□□ 2.18
SDHA-213ENST00000510361 TOPBP1Q92547 1522 aa28.65■■■□□ 2.18
SDHA-213ENST00000510361 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
SDHA-213ENST00000510361 CUX1P39880 1505 aa28.53■■■□□ 2.16
SDHA-213ENST00000510361 HRCP23327 699 aa28.48■■■□□ 2.15
SDHA-213ENST00000510361 EHMT2Q96KQ7 1210 aa28.45■■■□□ 2.14
SDHA-213ENST00000510361 WRNQ14191 1432 aaPredicted RBP eCLIP28.44■■■□□ 2.14
SDHA-213ENST00000510361 POLA1P09884 1462 aaPredicted RBP28.43■■■□□ 2.14
SDHA-213ENST00000510361 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
SDHA-213ENST00000510361 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.14
SDHA-213ENST00000510361 TRIM26Q12899 539 aaPredicted RBP28.39■■■□□ 2.13
SDHA-213ENST00000510361 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
SDHA-213ENST00000510361 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
SDHA-213ENST00000510361 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
SDHA-213ENST00000510361 SOGA1O94964 1423 aa28.34■■■□□ 2.13
SDHA-213ENST00000510361 TARBP1Q13395 1621 aaKnown RBP28.33■■■□□ 2.13
SDHA-213ENST00000510361 RAD54L2Q9Y4B4 1467 aa28.3■■■□□ 2.12
SDHA-213ENST00000510361 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
SDHA-213ENST00000510361 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
SDHA-213ENST00000510361 EEA1Q15075 1411 aa28.22■■■□□ 2.11
SDHA-213ENST00000510361 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
SDHA-213ENST00000510361 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
SDHA-213ENST00000510361 AQRO60306 1485 aaKnown RBP eCLIP28.14■■■□□ 2.091e-7■■■■■ 30.9
SDHA-213ENST00000510361 ABCA10Q8WWZ4 1543 aa28.13■■■□□ 2.09
SDHA-213ENST00000510361 TDRD9Q8NDG6 1382 aaKnown RBP28.12■■■□□ 2.09
SDHA-213ENST00000510361 CSRNP3Q8WYN3 585 aa28.12■■■□□ 2.09
SDHA-213ENST00000510361 TNIKQ9UKE5 1360 aa28.04■■■□□ 2.08
SDHA-213ENST00000510361 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
SDHA-213ENST00000510361 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
SDHA-213ENST00000510361 CEP162Q5TB80 1403 aa27.99■■■□□ 2.07
SDHA-213ENST00000510361 GRIN2BQ13224 1484 aa27.95■■■□□ 2.06
SDHA-213ENST00000510361 GOLGA3Q08378 1498 aa27.94■■■□□ 2.06
SDHA-213ENST00000510361 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
SDHA-213ENST00000510361 KIF21BO75037 1637 aa27.9■■■□□ 2.06
SDHA-213ENST00000510361 SNAPC4Q5SXM2 1469 aa27.88■■■□□ 2.05
SDHA-213ENST00000510361 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
SDHA-213ENST00000510361 MAGI1Q96QZ7 1491 aaPredicted RBP27.85■■■□□ 2.05
SDHA-213ENST00000510361 UBTFP17480 764 aaKnown RBP27.83■■■□□ 2.05
SDHA-213ENST00000510361 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
SDHA-213ENST00000510361 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
SDHA-213ENST00000510361 CHD1O14646 1710 aa27.78■■■□□ 2.04
SDHA-213ENST00000510361 FBLN2P98095 1184 aa27.75■■■□□ 2.03
SDHA-213ENST00000510361 SYNJ2O15056 1496 aa27.74■■■□□ 2.03
SDHA-213ENST00000510361 OSCARQ8IYS5 282 aa27.72■■■□□ 2.03
SDHA-213ENST00000510361 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
SDHA-213ENST00000510361 CHMP7Q8WUX9 453 aaPredicted RBP27.71■■■□□ 2.03
SDHA-213ENST00000510361 RAPGEF2Q9Y4G8 1499 aa27.69■■■□□ 2.02
SDHA-213ENST00000510361 DNAJC5Q9H3Z4 198 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms