RNA–Protein interactions for RNA: ENST00000462773.6

HLA-J-201, Transcript of major histocompatibility complex, class I, J (pseudogene), humanhuman

BASIC

Gene HLA-J, Length 1,622 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-J-201ENST00000462773 NISCHQ9Y2I1 1504 aa42.5■■■■■ 4.39
HLA-J-201ENST00000462773 CCDC180Q9P1Z9 1646 aa37.9■■■■□ 3.66
HLA-J-201ENST00000462773 ABCC9O60706 1549 aa37.46■■■■□ 3.59
HLA-J-201ENST00000462773 RB1CC1Q8TDY2 1594 aa35.89■■■■□ 3.34
HLA-J-201ENST00000462773 NACADO15069 1562 aa35.76■■■■□ 3.32
HLA-J-201ENST00000462773 DCAF8L2P0C7V8 631 aa35.75■■■■□ 3.31
HLA-J-201ENST00000462773 MYO15BQ96JP2 1530 aa35.42■■■■□ 3.26
HLA-J-201ENST00000462773 ZCCHC6Q5VYS8 1495 aaKnown RBP35.32■■■■□ 3.25
HLA-J-201ENST00000462773 DCAF1Q9Y4B6 1507 aa35.14■■■■□ 3.22
HLA-J-201ENST00000462773 PABPN1Q86U42 306 aaKnown RBP eCLIP34.96■■■■□ 3.19
HLA-J-201ENST00000462773 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.18
HLA-J-201ENST00000462773 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
HLA-J-201ENST00000462773 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
HLA-J-201ENST00000462773 SCRIBQ14160 1630 aa34.57■■■■□ 3.13
HLA-J-201ENST00000462773 SHROOM4Q9ULL8 1493 aa34.43■■■■□ 3.1
HLA-J-201ENST00000462773 EIF4G1Q04637 1599 aaKnown RBP33.9■■■■□ 3.02
HLA-J-201ENST00000462773 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
HLA-J-201ENST00000462773 CECR2Q9BXF3 1484 aa33.71■■■□□ 2.99
HLA-J-201ENST00000462773 SMARCA4P51532 1647 aa33.03■■■□□ 2.88
HLA-J-201ENST00000462773 NCAPD3P42695 1498 aa33■■■□□ 2.87
HLA-J-201ENST00000462773 BAZ1AQ9NRL2 1556 aaPredicted RBP32.98■■■□□ 2.87
HLA-J-201ENST00000462773 ATAD2BQ9ULI0 1458 aa32.96■■■□□ 2.87
HLA-J-201ENST00000462773 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
HLA-J-201ENST00000462773 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
HLA-J-201ENST00000462773 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
HLA-J-201ENST00000462773 PEG3Q9GZU2 1588 aa32.71■■■□□ 2.83
HLA-J-201ENST00000462773 BAZ1BQ9UIG0 1483 aaKnown RBP32.7■■■□□ 2.83
HLA-J-201ENST00000462773 ERCC6Q03468 1493 aa32.37■■■□□ 2.77
HLA-J-201ENST00000462773 WIZO95785 1651 aa32.34■■■□□ 2.77
HLA-J-201ENST00000462773 NESP48681 1621 aa32.28■■■□□ 2.76
HLA-J-201ENST00000462773 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.75
HLA-J-201ENST00000462773 LAMC3Q9Y6N6 1575 aa32.18■■■□□ 2.74
HLA-J-201ENST00000462773 CUX2O14529 1486 aa32.11■■■□□ 2.73
HLA-J-201ENST00000462773 CADPSQ9ULU8 1353 aa32.04■■■□□ 2.72
HLA-J-201ENST00000462773 PDS5BQ9NTI5 1447 aa32.03■■■□□ 2.72
HLA-J-201ENST00000462773 TOP2AP11388 1531 aaKnown RBP32.01■■■□□ 2.72
HLA-J-201ENST00000462773 KIF21AQ7Z4S6 1674 aa31.86■■■□□ 2.69
HLA-J-201ENST00000462773 THOC2Q8NI27 1593 aaKnown RBP31.85■■■□□ 2.69
HLA-J-201ENST00000462773 CFTRP13569 1480 aa31.76■■■□□ 2.68
HLA-J-201ENST00000462773 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
HLA-J-201ENST00000462773 CEP164Q9UPV0 1460 aa31.67■■■□□ 2.66
HLA-J-201ENST00000462773 FANCD2Q9BXW9 1451 aa31.67■■■□□ 2.66
HLA-J-201ENST00000462773 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
HLA-J-201ENST00000462773 WDR62O43379 1518 aa31.57■■■□□ 2.64
HLA-J-201ENST00000462773 DNAJC5Q9H3Z4 198 aa31.53■■■□□ 2.64
HLA-J-201ENST00000462773 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
HLA-J-201ENST00000462773 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
HLA-J-201ENST00000462773 SUPT5HO00267 1087 aaKnown RBP31.26■■■□□ 2.59
HLA-J-201ENST00000462773 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
HLA-J-201ENST00000462773 TOPBP1Q92547 1522 aa31.11■■■□□ 2.57
HLA-J-201ENST00000462773 DNMBPQ6XZF7 1577 aa31.03■■■□□ 2.56
HLA-J-201ENST00000462773 IFT140Q96RY7 1462 aa31.02■■■□□ 2.56
HLA-J-201ENST00000462773 ZNF608Q9ULD9 1512 aaPredicted RBP30.87■■■□□ 2.53
HLA-J-201ENST00000462773 POLA1P09884 1462 aaPredicted RBP30.83■■■□□ 2.53
HLA-J-201ENST00000462773 OSCARQ8IYS5 282 aa30.76■■■□□ 2.52
HLA-J-201ENST00000462773 TARBP1Q13395 1621 aaKnown RBP30.75■■■□□ 2.51
HLA-J-201ENST00000462773 EIF4G3O43432 1585 aaKnown RBP30.73■■■□□ 2.51
HLA-J-201ENST00000462773 CUX1P39880 1505 aa30.73■■■□□ 2.51
HLA-J-201ENST00000462773 SOGA1O94964 1423 aa30.72■■■□□ 2.51
HLA-J-201ENST00000462773 FGD5Q6ZNL6 1462 aa30.7■■■□□ 2.51
HLA-J-201ENST00000462773 RAD54L2Q9Y4B4 1467 aa30.68■■■□□ 2.5
HLA-J-201ENST00000462773 AQRO60306 1485 aaKnown RBP eCLIP30.68■■■□□ 2.5
HLA-J-201ENST00000462773 TDRD9Q8NDG6 1382 aaKnown RBP30.59■■■□□ 2.49
HLA-J-201ENST00000462773 WDR97A6NE52 1622 aa30.53■■■□□ 2.48
HLA-J-201ENST00000462773 WRNQ14191 1432 aaPredicted RBP eCLIP30.46■■■□□ 2.47
HLA-J-201ENST00000462773 FBLN2P98095 1184 aa30.46■■■□□ 2.47
HLA-J-201ENST00000462773 GRIN2BQ13224 1484 aa30.4■■■□□ 2.46
HLA-J-201ENST00000462773 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
HLA-J-201ENST00000462773 ABCA10Q8WWZ4 1543 aa30.39■■■□□ 2.45
HLA-J-201ENST00000462773 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
HLA-J-201ENST00000462773 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
HLA-J-201ENST00000462773 CHD1O14646 1710 aa30.38■■■□□ 2.45
HLA-J-201ENST00000462773 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
HLA-J-201ENST00000462773 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
HLA-J-201ENST00000462773 BIVM-ERCC5R4GMW8 1640 aa30.35■■■□□ 2.45
HLA-J-201ENST00000462773 SYNJ1O43426 1573 aa30.34■■■□□ 2.45
HLA-J-201ENST00000462773 CHMP7Q8WUX9 453 aaPredicted RBP30.31■■■□□ 2.44
HLA-J-201ENST00000462773 ABCA5Q8WWZ7 1642 aa30.26■■■□□ 2.43
HLA-J-201ENST00000462773 SYNJ2O15056 1496 aa30.24■■■□□ 2.43
HLA-J-201ENST00000462773 PBRM1Q86U86 1689 aa30.24■■■□□ 2.43
HLA-J-201ENST00000462773 RIMBP3CA6NJZ7 1639 aa30.21■■■□□ 2.43
HLA-J-201ENST00000462773 RIMBP3BA6NNM3 1639 aa30.21■■■□□ 2.43
HLA-J-201ENST00000462773 RIMBP3Q9UFD9 1639 aa30.21■■■□□ 2.43
HLA-J-201ENST00000462773 ARHGEF11O15085 1522 aa30.21■■■□□ 2.43
HLA-J-201ENST00000462773 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
HLA-J-201ENST00000462773 ERICH3Q5RHP9 1530 aa30.02■■■□□ 2.4
HLA-J-201ENST00000462773 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
HLA-J-201ENST00000462773 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
HLA-J-201ENST00000462773 CYB5RLQ6IPT4 315 aa30■■■□□ 2.39
HLA-J-201ENST00000462773 GRIN2AQ12879 1464 aa30■■■□□ 2.39
HLA-J-201ENST00000462773 FHAD1B1AJZ9 1412 aa30■■■□□ 2.39
HLA-J-201ENST00000462773 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
HLA-J-201ENST00000462773 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
HLA-J-201ENST00000462773 NUP160Q12769 1436 aa29.86■■■□□ 2.37
HLA-J-201ENST00000462773 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
HLA-J-201ENST00000462773 IGF1RP08069 1367 aa29.75■■■□□ 2.35
HLA-J-201ENST00000462773 CUL7Q14999 1698 aa29.68■■■□□ 2.34
HLA-J-201ENST00000462773 SHROOM2Q13796 1616 aa29.64■■■□□ 2.33
HLA-J-201ENST00000462773 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
HLA-J-201ENST00000462773 ERCC6L2Q5T890 1561 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms