RNA–Protein interactions for RNA: ENST00000356185.7

SUPT20H-202, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUPT20H, Length 2,681 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-202ENST00000356185 NISCHQ9Y2I1 1504 aa38.36■■■■□ 3.73
SUPT20H-202ENST00000356185 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
SUPT20H-202ENST00000356185 ZCCHC6Q5VYS8 1495 aaKnown RBP32.36■■■□□ 2.77
SUPT20H-202ENST00000356185 SHROOM4Q9ULL8 1493 aa32.28■■■□□ 2.76
SUPT20H-202ENST00000356185 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
SUPT20H-202ENST00000356185 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
SUPT20H-202ENST00000356185 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
SUPT20H-202ENST00000356185 ABCC9O60706 1549 aa30.83■■■□□ 2.53
SUPT20H-202ENST00000356185 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
SUPT20H-202ENST00000356185 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
SUPT20H-202ENST00000356185 NACADO15069 1562 aa30.45■■■□□ 2.46
SUPT20H-202ENST00000356185 CHIC1Q5VXU3 224 aa30.35■■■□□ 2.45
SUPT20H-202ENST00000356185 RSF1Q96T23 1441 aaPredicted RBP30.19■■■□□ 2.42
SUPT20H-202ENST00000356185 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
SUPT20H-202ENST00000356185 CECR2Q9BXF3 1484 aa30.01■■■□□ 2.39
SUPT20H-202ENST00000356185 MROH2BQ7Z745 1585 aa29.83■■■□□ 2.37
SUPT20H-202ENST00000356185 UNC13AQ9UPW8 1703 aa29.64■■■□□ 2.33
SUPT20H-202ENST00000356185 WIZO95785 1651 aa29.61■■■□□ 2.33
SUPT20H-202ENST00000356185 BAZ1AQ9NRL2 1556 aaPredicted RBP29.45■■■□□ 2.3
SUPT20H-202ENST00000356185 LOC105371045A0A1W2PR82 267 aa29.43■■■□□ 2.3
SUPT20H-202ENST00000356185 PABPN1Q86U42 306 aaKnown RBP eCLIP29.39■■■□□ 2.3
SUPT20H-202ENST00000356185 BICRAQ9NZM4 1560 aa29.36■■■□□ 2.29
SUPT20H-202ENST00000356185 SMARCA4P51532 1647 aa29.3■■■□□ 2.28
SUPT20H-202ENST00000356185 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
SUPT20H-202ENST00000356185 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
SUPT20H-202ENST00000356185 EIF4G1Q04637 1599 aaKnown RBP29.06■■■□□ 2.24
SUPT20H-202ENST00000356185 CCDC88BA6NC98 1476 aa29.02■■■□□ 2.24
SUPT20H-202ENST00000356185 FAM9AQ8IZU1 332 aaPredicted RBP29.01■■■□□ 2.24
SUPT20H-202ENST00000356185 SMARCA2P51531 1590 aa28.97■■■□□ 2.23
SUPT20H-202ENST00000356185 HRCP23327 699 aa28.94■■■□□ 2.22
SUPT20H-202ENST00000356185 PCGF6Q9BYE7 350 aa28.83■■■□□ 2.21
SUPT20H-202ENST00000356185 PEG3Q9GZU2 1588 aa28.79■■■□□ 2.2
SUPT20H-202ENST00000356185 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
SUPT20H-202ENST00000356185 ABCC8Q09428 1581 aa28.77■■■□□ 2.2
SUPT20H-202ENST00000356185 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.18
SUPT20H-202ENST00000356185 PPARGC1BQ86YN6 1023 aaKnown RBP28.53■■■□□ 2.16
SUPT20H-202ENST00000356185 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
SUPT20H-202ENST00000356185 SOGA1O94964 1423 aa28.42■■■□□ 2.14
SUPT20H-202ENST00000356185 TRIM26Q12899 539 aaPredicted RBP28.35■■■□□ 2.13
SUPT20H-202ENST00000356185 RUSC2Q8N2Y8 1516 aa28.34■■■□□ 2.13
SUPT20H-202ENST00000356185 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
SUPT20H-202ENST00000356185 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
SUPT20H-202ENST00000356185 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
SUPT20H-202ENST00000356185 HMGXB3Q12766 1538 aa28.15■■■□□ 2.1
SUPT20H-202ENST00000356185 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.09
SUPT20H-202ENST00000356185 EEA1Q15075 1411 aa28.07■■■□□ 2.08
SUPT20H-202ENST00000356185 CEP162Q5TB80 1403 aa27.98■■■□□ 2.07
SUPT20H-202ENST00000356185 TNIKQ9UKE5 1360 aa27.98■■■□□ 2.07
SUPT20H-202ENST00000356185 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
SUPT20H-202ENST00000356185 TOP2BQ02880 1626 aa27.9■■■□□ 2.06
SUPT20H-202ENST00000356185 GOLGA3Q08378 1498 aa27.88■■■□□ 2.05
SUPT20H-202ENST00000356185 CFTRP13569 1480 aa27.86■■■□□ 2.05
SUPT20H-202ENST00000356185 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
SUPT20H-202ENST00000356185 CUX1P39880 1505 aa27.79■■■□□ 2.04
SUPT20H-202ENST00000356185 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
SUPT20H-202ENST00000356185 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
SUPT20H-202ENST00000356185 KIF21BO75037 1637 aa27.76■■■□□ 2.03
SUPT20H-202ENST00000356185 RAPGEF2Q9Y4G8 1499 aa27.73■■■□□ 2.03
SUPT20H-202ENST00000356185 TTBK1Q5TCY1 1321 aaPredicted RBP27.69■■■□□ 2.02
SUPT20H-202ENST00000356185 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
SUPT20H-202ENST00000356185 CLIP1P30622 1438 aa27.55■■■□□ 2
SUPT20H-202ENST00000356185 PRXQ9BXM0 1461 aa27.53■■■□□ 2
SUPT20H-202ENST00000356185 PRDM2Q13029 1718 aa27.52■■■□□ 2
SUPT20H-202ENST00000356185 RANGAP1P46060 587 aaPredicted RBP27.51■■□□□ 1.99
SUPT20H-202ENST00000356185 KIF27Q86VH2 1401 aa27.44■■□□□ 1.98
SUPT20H-202ENST00000356185 ZEB1P37275 1124 aaPredicted RBP27.43■■□□□ 1.98
SUPT20H-202ENST00000356185 ERICH3Q5RHP9 1530 aa27.4■■□□□ 1.98
SUPT20H-202ENST00000356185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.38■■□□□ 1.97
SUPT20H-202ENST00000356185 NESP48681 1621 aa27.38■■□□□ 1.97
SUPT20H-202ENST00000356185 VPS8Q8N3P4 1428 aa27.37■■□□□ 1.97
SUPT20H-202ENST00000356185 DNAJC5BQ9UF47 199 aa27.37■■□□□ 1.97
SUPT20H-202ENST00000356185 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
SUPT20H-202ENST00000356185 FGD5Q6ZNL6 1462 aa27.34■■□□□ 1.97
SUPT20H-202ENST00000356185 CUX2O14529 1486 aa27.32■■□□□ 1.96
SUPT20H-202ENST00000356185 IGF1RP08069 1367 aa27.28■■□□□ 1.96
SUPT20H-202ENST00000356185 ARAP1Q96P48 1450 aa27.25■■□□□ 1.95
SUPT20H-202ENST00000356185 CCER1Q8TC90 406 aaPredicted RBP27.17■■□□□ 1.94
SUPT20H-202ENST00000356185 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
SUPT20H-202ENST00000356185 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
SUPT20H-202ENST00000356185 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
SUPT20H-202ENST00000356185 CARMIL1Q5VZK9 1371 aa27.1■■□□□ 1.93
SUPT20H-202ENST00000356185 POLA1P09884 1462 aaPredicted RBP27.1■■□□□ 1.93
SUPT20H-202ENST00000356185 ARHGAP35Q9NRY4 1499 aa27.09■■□□□ 1.93
SUPT20H-202ENST00000356185 APLP2Q06481 763 aa27.06■■□□□ 1.92
SUPT20H-202ENST00000356185 KANK4Q5T7N3 995 aaPredicted RBP27.04■■□□□ 1.92
SUPT20H-202ENST00000356185 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
SUPT20H-202ENST00000356185 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
SUPT20H-202ENST00000356185 HNRNPUL2Q1KMD3 747 aaKnown RBP27.02■■□□□ 1.92
SUPT20H-202ENST00000356185 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.92
SUPT20H-202ENST00000356185 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
SUPT20H-202ENST00000356185 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
SUPT20H-202ENST00000356185 KIF21AQ7Z4S6 1674 aa26.84■■□□□ 1.89
SUPT20H-202ENST00000356185 TDRD9Q8NDG6 1382 aaKnown RBP26.83■■□□□ 1.89
SUPT20H-202ENST00000356185 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
SUPT20H-202ENST00000356185 P3H3Q8IVL6 736 aa26.79■■□□□ 1.88
SUPT20H-202ENST00000356185 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
SUPT20H-202ENST00000356185 CUL7Q14999 1698 aa26.71■■□□□ 1.87
SUPT20H-202ENST00000356185 RRBP1Q9P2E9 1410 aaKnown RBP26.69■■□□□ 1.86
SUPT20H-202ENST00000356185 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
SUPT20H-202ENST00000356185 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms