RNA–Protein interactions for RNA: ENST00000375911.1

C6orf47-202, Transcript of chromosome 6 open reading frame 47, humanhuman

APPRIS P1 BASIC

Gene C6orf47, Length 2,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf47-202ENST00000375911 NISCHQ9Y2I1 1504 aa36.01■■■■□ 3.35
C6orf47-202ENST00000375911 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
C6orf47-202ENST00000375911 SHROOM4Q9ULL8 1493 aa30.75■■■□□ 2.51
C6orf47-202ENST00000375911 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
C6orf47-202ENST00000375911 SUPT5HO00267 1087 aaKnown RBP30.28■■■□□ 2.44
C6orf47-202ENST00000375911 DCAF8L2P0C7V8 631 aa29.85■■■□□ 2.37
C6orf47-202ENST00000375911 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
C6orf47-202ENST00000375911 DCAF1Q9Y4B6 1507 aa29.64■■■□□ 2.34
C6orf47-202ENST00000375911 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
C6orf47-202ENST00000375911 HRCP23327 699 aa29.34■■■□□ 2.29
C6orf47-202ENST00000375911 PCGF6Q9BYE7 350 aa29.1■■■□□ 2.25
C6orf47-202ENST00000375911 ABCC9O60706 1549 aa28.83■■■□□ 2.21
C6orf47-202ENST00000375911 PPARGC1BQ86YN6 1023 aaKnown RBP28.81■■■□□ 2.2
C6orf47-202ENST00000375911 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
C6orf47-202ENST00000375911 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
C6orf47-202ENST00000375911 NACADO15069 1562 aa28.65■■■□□ 2.18
C6orf47-202ENST00000375911 TRIM26Q12899 539 aaPredicted RBP28.37■■■□□ 2.13
C6orf47-202ENST00000375911 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
C6orf47-202ENST00000375911 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
C6orf47-202ENST00000375911 TRIM41Q8WV44 630 aa28.08■■■□□ 2.09
C6orf47-202ENST00000375911 CECR2Q9BXF3 1484 aa28.04■■■□□ 2.08
C6orf47-202ENST00000375911 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
C6orf47-202ENST00000375911 MROH2BQ7Z745 1585 aa27.91■■■□□ 2.06
C6orf47-202ENST00000375911 ZEB1P37275 1124 aaPredicted RBP27.82■■■□□ 2.04
C6orf47-202ENST00000375911 EHMT2Q96KQ7 1210 aa27.82■■■□□ 2.04
C6orf47-202ENST00000375911 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
C6orf47-202ENST00000375911 WIZO95785 1651 aa27.7■■■□□ 2.02
C6orf47-202ENST00000375911 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
C6orf47-202ENST00000375911 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
C6orf47-202ENST00000375911 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
C6orf47-202ENST00000375911 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
C6orf47-202ENST00000375911 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
C6orf47-202ENST00000375911 TOP2AP11388 1531 aaKnown RBP27.36■■□□□ 1.97
C6orf47-202ENST00000375911 SCAF1Q9H7N4 1312 aaKnown RBP27.35■■□□□ 1.97
C6orf47-202ENST00000375911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.26■■□□□ 1.95
C6orf47-202ENST00000375911 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
C6orf47-202ENST00000375911 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
C6orf47-202ENST00000375911 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
C6orf47-202ENST00000375911 CCER1Q8TC90 406 aaPredicted RBP27.14■■□□□ 1.93
C6orf47-202ENST00000375911 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
C6orf47-202ENST00000375911 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
C6orf47-202ENST00000375911 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.92
C6orf47-202ENST00000375911 PELP1Q8IZL8 1130 aaKnown RBP27■■□□□ 1.91
C6orf47-202ENST00000375911 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
C6orf47-202ENST00000375911 SOGA1O94964 1423 aa26.97■■□□□ 1.91
C6orf47-202ENST00000375911 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
C6orf47-202ENST00000375911 ACIN1Q9UKV3 1341 aaKnown RBP26.88■■□□□ 1.89
C6orf47-202ENST00000375911 NEUROD1Q13562 356 aa26.87■■□□□ 1.89
C6orf47-202ENST00000375911 TNIKQ9UKE5 1360 aa26.86■■□□□ 1.89
C6orf47-202ENST00000375911 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
C6orf47-202ENST00000375911 DIEXFQ68CQ4 756 aaKnown RBP26.83■■□□□ 1.89
C6orf47-202ENST00000375911 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
C6orf47-202ENST00000375911 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
C6orf47-202ENST00000375911 EEA1Q15075 1411 aa26.73■■□□□ 1.87
C6orf47-202ENST00000375911 UBTFP17480 764 aaKnown RBP26.71■■□□□ 1.87
C6orf47-202ENST00000375911 GOLGA3Q08378 1498 aa26.65■■□□□ 1.86
C6orf47-202ENST00000375911 GTF3C3Q9Y5Q9 886 aa26.61■■□□□ 1.85
C6orf47-202ENST00000375911 CENPBP07199 599 aaPredicted RBP26.57■■□□□ 1.84
C6orf47-202ENST00000375911 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
C6orf47-202ENST00000375911 ZNF316A6NFI3 1004 aaPredicted RBP26.5■■□□□ 1.83
C6orf47-202ENST00000375911 SYNJ1O43426 1573 aa26.49■■□□□ 1.83
C6orf47-202ENST00000375911 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
C6orf47-202ENST00000375911 CEP164Q9UPV0 1460 aa26.44■■□□□ 1.82
C6orf47-202ENST00000375911 KIF21BO75037 1637 aa26.43■■□□□ 1.82
C6orf47-202ENST00000375911 HNRNPUL2Q1KMD3 747 aaKnown RBP26.41■■□□□ 1.82
C6orf47-202ENST00000375911 CLIP1P30622 1438 aa26.38■■□□□ 1.81
C6orf47-202ENST00000375911 VPS8Q8N3P4 1428 aa26.31■■□□□ 1.8
C6orf47-202ENST00000375911 YTHDC1Q96MU7 727 aaKnown RBP26.3■■□□□ 1.8
C6orf47-202ENST00000375911 RAPGEF2Q9Y4G8 1499 aa26.28■■□□□ 1.8
C6orf47-202ENST00000375911 MIER1Q8N108 512 aa26.26■■□□□ 1.79
C6orf47-202ENST00000375911 TOP2BQ02880 1626 aa26.2■■□□□ 1.79
C6orf47-202ENST00000375911 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
C6orf47-202ENST00000375911 CFTRP13569 1480 aa26.16■■□□□ 1.78
C6orf47-202ENST00000375911 APLP2Q06481 763 aa26.12■■□□□ 1.77
C6orf47-202ENST00000375911 BIVM-ERCC5R4GMW8 1640 aa26.11■■□□□ 1.77
C6orf47-202ENST00000375911 CUX1P39880 1505 aa26.03■■□□□ 1.76
C6orf47-202ENST00000375911 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
C6orf47-202ENST00000375911 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
C6orf47-202ENST00000375911 ARAP1Q96P48 1450 aa25.97■■□□□ 1.75
C6orf47-202ENST00000375911 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
C6orf47-202ENST00000375911 DHX57Q6P158 1386 aaKnown RBP25.94■■□□□ 1.74
C6orf47-202ENST00000375911 PRXQ9BXM0 1461 aa25.92■■□□□ 1.74
C6orf47-202ENST00000375911 ERICH3Q5RHP9 1530 aa25.92■■□□□ 1.74
C6orf47-202ENST00000375911 KANK4Q5T7N3 995 aaPredicted RBP25.9■■□□□ 1.74
C6orf47-202ENST00000375911 KIF27Q86VH2 1401 aa25.86■■□□□ 1.73
C6orf47-202ENST00000375911 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
C6orf47-202ENST00000375911 CLSPNQ9HAW4 1339 aa25.84■■□□□ 1.73
C6orf47-202ENST00000375911 RRBP1Q9P2E9 1410 aaKnown RBP25.76■■□□□ 1.71
C6orf47-202ENST00000375911 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
C6orf47-202ENST00000375911 CUX2O14529 1486 aa25.66■■□□□ 1.7
C6orf47-202ENST00000375911 ARHGAP35Q9NRY4 1499 aa25.66■■□□□ 1.7
C6orf47-202ENST00000375911 MYT1Q01538 1121 aa25.65■■□□□ 1.7
C6orf47-202ENST00000375911 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.7
C6orf47-202ENST00000375911 CCNB3Q8WWL7 1395 aa25.62■■□□□ 1.69
C6orf47-202ENST00000375911 IGF1RP08069 1367 aa25.6■■□□□ 1.69
C6orf47-202ENST00000375911 ITGAEP38570 1179 aa25.57■■□□□ 1.68
C6orf47-202ENST00000375911 SUPT16HQ9Y5B9 1047 aaKnown RBP25.55■■□□□ 1.68
C6orf47-202ENST00000375911 NESP48681 1621 aa25.55■■□□□ 1.68
C6orf47-202ENST00000375911 CARMIL1Q5VZK9 1371 aa25.49■■□□□ 1.67
C6orf47-202ENST00000375911 MAPKBP1O60336 1514 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms