RNA–Protein interactions for RNA: ENST00000622647.3

ZNF48-206, Transcript of zinc finger protein 48, humanhuman

TSL 4 BASIC

Gene ZNF48, Length 2,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-206ENST00000622647 NISCHQ9Y2I1 1504 aa37.75■■■■□ 3.63
ZNF48-206ENST00000622647 SHROOM4Q9ULL8 1493 aa32.19■■■□□ 2.74
ZNF48-206ENST00000622647 CCDC180Q9P1Z9 1646 aa32.15■■■□□ 2.74
ZNF48-206ENST00000622647 DCAF8L2P0C7V8 631 aa31.86■■■□□ 2.69
ZNF48-206ENST00000622647 ZCCHC6Q5VYS8 1495 aaKnown RBP31.79■■■□□ 2.68
ZNF48-206ENST00000622647 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
ZNF48-206ENST00000622647 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
ZNF48-206ENST00000622647 ABCC9O60706 1549 aa30.53■■■□□ 2.48
ZNF48-206ENST00000622647 SCRIBQ14160 1630 aa30.32■■■□□ 2.44
ZNF48-206ENST00000622647 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
ZNF48-206ENST00000622647 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
ZNF48-206ENST00000622647 NACADO15069 1562 aa29.91■■■□□ 2.38
ZNF48-206ENST00000622647 RSF1Q96T23 1441 aaPredicted RBP29.75■■■□□ 2.35
ZNF48-206ENST00000622647 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
ZNF48-206ENST00000622647 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
ZNF48-206ENST00000622647 MROH2BQ7Z745 1585 aa29.4■■■□□ 2.3
ZNF48-206ENST00000622647 LOC105371045A0A1W2PR82 267 aa29.34■■■□□ 2.29
ZNF48-206ENST00000622647 WIZO95785 1651 aa29.22■■■□□ 2.27
ZNF48-206ENST00000622647 PABPN1Q86U42 306 aaKnown RBP eCLIP29.22■■■□□ 2.27
ZNF48-206ENST00000622647 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
ZNF48-206ENST00000622647 UNC13AQ9UPW8 1703 aa29.12■■■□□ 2.25
ZNF48-206ENST00000622647 FAM9AQ8IZU1 332 aaPredicted RBP29.05■■■□□ 2.24
ZNF48-206ENST00000622647 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
ZNF48-206ENST00000622647 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
ZNF48-206ENST00000622647 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
ZNF48-206ENST00000622647 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
ZNF48-206ENST00000622647 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
ZNF48-206ENST00000622647 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
ZNF48-206ENST00000622647 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
ZNF48-206ENST00000622647 SMARCA2P51531 1590 aa28.52■■■□□ 2.16
ZNF48-206ENST00000622647 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
ZNF48-206ENST00000622647 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.15
ZNF48-206ENST00000622647 HRCP23327 699 aa28.31■■■□□ 2.12
ZNF48-206ENST00000622647 ATAD2BQ9ULI0 1458 aa28.25■■■□□ 2.11
ZNF48-206ENST00000622647 TRIM26Q12899 539 aaPredicted RBP28.21■■■□□ 2.11
ZNF48-206ENST00000622647 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
ZNF48-206ENST00000622647 PPARGC1BQ86YN6 1023 aaKnown RBP28.17■■■□□ 2.1
ZNF48-206ENST00000622647 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
ZNF48-206ENST00000622647 SOGA1O94964 1423 aa28.12■■■□□ 2.09
ZNF48-206ENST00000622647 RUSC2Q8N2Y8 1516 aa28.03■■■□□ 2.08
ZNF48-206ENST00000622647 WRNQ14191 1432 aaPredicted RBP eCLIP27.97■■■□□ 2.07
ZNF48-206ENST00000622647 CSRNP3Q8WYN3 585 aa27.91■■■□□ 2.06
ZNF48-206ENST00000622647 UBTFP17480 764 aaKnown RBP27.87■■■□□ 2.05
ZNF48-206ENST00000622647 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
ZNF48-206ENST00000622647 SYNJ1O43426 1573 aa27.84■■■□□ 2.05
ZNF48-206ENST00000622647 NCAPD3P42695 1498 aa27.72■■■□□ 2.03
ZNF48-206ENST00000622647 CEP162Q5TB80 1403 aa27.7■■■□□ 2.03
ZNF48-206ENST00000622647 EEA1Q15075 1411 aa27.66■■■□□ 2.02
ZNF48-206ENST00000622647 RANGAP1P46060 587 aaPredicted RBP27.64■■■□□ 2.02
ZNF48-206ENST00000622647 TNIKQ9UKE5 1360 aa27.63■■■□□ 2.01
ZNF48-206ENST00000622647 HMGXB3Q12766 1538 aa27.61■■■□□ 2.01
ZNF48-206ENST00000622647 GOLGA3Q08378 1498 aa27.56■■■□□ 2
ZNF48-206ENST00000622647 TOP2BQ02880 1626 aa27.45■■□□□ 1.99
ZNF48-206ENST00000622647 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
ZNF48-206ENST00000622647 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
ZNF48-206ENST00000622647 CFTRP13569 1480 aa27.39■■□□□ 1.98
ZNF48-206ENST00000622647 CUX1P39880 1505 aa27.38■■□□□ 1.97
ZNF48-206ENST00000622647 CC2D2AQ9P2K1 1620 aa27.36■■□□□ 1.97
ZNF48-206ENST00000622647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
ZNF48-206ENST00000622647 KIF21BO75037 1637 aa27.32■■□□□ 1.96
ZNF48-206ENST00000622647 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
ZNF48-206ENST00000622647 CLIP1P30622 1438 aa27.3■■□□□ 1.96
ZNF48-206ENST00000622647 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
ZNF48-206ENST00000622647 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
ZNF48-206ENST00000622647 CCER1Q8TC90 406 aaPredicted RBP27.2■■□□□ 1.94
ZNF48-206ENST00000622647 KIF27Q86VH2 1401 aa27.14■■□□□ 1.93
ZNF48-206ENST00000622647 PRXQ9BXM0 1461 aa27.09■■□□□ 1.93
ZNF48-206ENST00000622647 APLP2Q06481 763 aa27.08■■□□□ 1.93
ZNF48-206ENST00000622647 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
ZNF48-206ENST00000622647 NESP48681 1621 aa27.05■■□□□ 1.92
ZNF48-206ENST00000622647 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
ZNF48-206ENST00000622647 CUX2O14529 1486 aa27.04■■□□□ 1.92
ZNF48-206ENST00000622647 HNRNPUL2Q1KMD3 747 aaKnown RBP27.03■■□□□ 1.92
ZNF48-206ENST00000622647 PRDM2Q13029 1718 aa27■■□□□ 1.91
ZNF48-206ENST00000622647 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
ZNF48-206ENST00000622647 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
ZNF48-206ENST00000622647 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
ZNF48-206ENST00000622647 IGF1RP08069 1367 aa26.92■■□□□ 1.9
ZNF48-206ENST00000622647 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
ZNF48-206ENST00000622647 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
ZNF48-206ENST00000622647 KANK4Q5T7N3 995 aaPredicted RBP26.83■■□□□ 1.89
ZNF48-206ENST00000622647 CARMIL1Q5VZK9 1371 aa26.82■■□□□ 1.88
ZNF48-206ENST00000622647 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
ZNF48-206ENST00000622647 TOPBP1Q92547 1522 aa26.74■■□□□ 1.87
ZNF48-206ENST00000622647 ARHGAP35Q9NRY4 1499 aa26.74■■□□□ 1.87
ZNF48-206ENST00000622647 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
ZNF48-206ENST00000622647 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
ZNF48-206ENST00000622647 ATP1B4Q9UN42 357 aaPredicted RBP26.64■■□□□ 1.86
ZNF48-206ENST00000622647 URB2Q14146 1524 aaKnown RBP26.62■■□□□ 1.85
ZNF48-206ENST00000622647 TDRD9Q8NDG6 1382 aaKnown RBP26.61■■□□□ 1.85
ZNF48-206ENST00000622647 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
ZNF48-206ENST00000622647 ABCA10Q8WWZ4 1543 aa26.57■■□□□ 1.84
ZNF48-206ENST00000622647 ITGAEP38570 1179 aa26.57■■□□□ 1.84
ZNF48-206ENST00000622647 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
ZNF48-206ENST00000622647 KIF21AQ7Z4S6 1674 aa26.46■■□□□ 1.83
ZNF48-206ENST00000622647 FHOD3Q2V2M9 1422 aa26.43■■□□□ 1.82
ZNF48-206ENST00000622647 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
ZNF48-206ENST00000622647 DIEXFQ68CQ4 756 aaKnown RBP26.33■■□□□ 1.81
ZNF48-206ENST00000622647 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.81
ZNF48-206ENST00000622647 RRBP1Q9P2E9 1410 aaKnown RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms