RNA–Protein interactions for RNA: ENST00000297512.12

ASIC3-201, Transcript of acid sensing ion channel subunit 3, humanhuman

TSL 1 (best) BASIC

Gene ASIC3, Length 1,718 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-201ENST00000297512 NISCHQ9Y2I1 1504 aa41.05■■■■■ 4.16
ASIC3-201ENST00000297512 CCDC180Q9P1Z9 1646 aa36.04■■■■□ 3.36
ASIC3-201ENST00000297512 ABCC9O60706 1549 aa34.66■■■■□ 3.14
ASIC3-201ENST00000297512 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
ASIC3-201ENST00000297512 DCAF8L2P0C7V8 631 aa34.13■■■■□ 3.05
ASIC3-201ENST00000297512 DCAF1Q9Y4B6 1507 aa33.88■■■■□ 3.01
ASIC3-201ENST00000297512 NACADO15069 1562 aa33.67■■■□□ 2.98
ASIC3-201ENST00000297512 MYO15BQ96JP2 1530 aa33.67■■■□□ 2.98
ASIC3-201ENST00000297512 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
ASIC3-201ENST00000297512 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
ASIC3-201ENST00000297512 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
ASIC3-201ENST00000297512 UNC13AQ9UPW8 1703 aa32.91■■■□□ 2.86
ASIC3-201ENST00000297512 BICRAQ9NZM4 1560 aa32.59■■■□□ 2.81
ASIC3-201ENST00000297512 PABPN1Q86U42 306 aaKnown RBP eCLIP32.57■■■□□ 2.81
ASIC3-201ENST00000297512 CECR2Q9BXF3 1484 aa31.99■■■□□ 2.71
ASIC3-201ENST00000297512 MROH2BQ7Z745 1585 aa31.72■■■□□ 2.67
ASIC3-201ENST00000297512 BAZ1AQ9NRL2 1556 aaPredicted RBP31.72■■■□□ 2.67
ASIC3-201ENST00000297512 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
ASIC3-201ENST00000297512 EIF4G1Q04637 1599 aaKnown RBP31.65■■■□□ 2.66
ASIC3-201ENST00000297512 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
ASIC3-201ENST00000297512 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
ASIC3-201ENST00000297512 WIZO95785 1651 aa31.45■■■□□ 2.63
ASIC3-201ENST00000297512 CC2D2AQ9P2K1 1620 aa31.33■■■□□ 2.61
ASIC3-201ENST00000297512 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
ASIC3-201ENST00000297512 PEG3Q9GZU2 1588 aa31.28■■■□□ 2.6
ASIC3-201ENST00000297512 SMARCA2P51531 1590 aa31.23■■■□□ 2.59
ASIC3-201ENST00000297512 BAZ1BQ9UIG0 1483 aaKnown RBP31.1■■■□□ 2.57
ASIC3-201ENST00000297512 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
ASIC3-201ENST00000297512 DNAJC5BQ9UF47 199 aa31.08■■■□□ 2.57
ASIC3-201ENST00000297512 TOP2AP11388 1531 aaKnown RBP31.06■■■□□ 2.56
ASIC3-201ENST00000297512 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
ASIC3-201ENST00000297512 CCDC88BA6NC98 1476 aa30.75■■■□□ 2.51
ASIC3-201ENST00000297512 NESP48681 1621 aa30.26■■■□□ 2.43
ASIC3-201ENST00000297512 CADPSQ9ULU8 1353 aa30.26■■■□□ 2.43
ASIC3-201ENST00000297512 CFTRP13569 1480 aa30.26■■■□□ 2.43
ASIC3-201ENST00000297512 LAMC3Q9Y6N6 1575 aa30.14■■■□□ 2.42
ASIC3-201ENST00000297512 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
ASIC3-201ENST00000297512 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
ASIC3-201ENST00000297512 FANCD2Q9BXW9 1451 aa29.96■■■□□ 2.39
ASIC3-201ENST00000297512 CHIC1Q5VXU3 224 aa29.91■■■□□ 2.38
ASIC3-201ENST00000297512 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
ASIC3-201ENST00000297512 KIF21AQ7Z4S6 1674 aa29.89■■■□□ 2.37
ASIC3-201ENST00000297512 CEP164Q9UPV0 1460 aa29.82■■■□□ 2.36
ASIC3-201ENST00000297512 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
ASIC3-201ENST00000297512 ERCC6Q03468 1493 aa29.75■■■□□ 2.35
ASIC3-201ENST00000297512 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
ASIC3-201ENST00000297512 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
ASIC3-201ENST00000297512 CUX1P39880 1505 aa29.7■■■□□ 2.34
ASIC3-201ENST00000297512 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
ASIC3-201ENST00000297512 TOP2BQ02880 1626 aa29.61■■■□□ 2.33
ASIC3-201ENST00000297512 BIVM-ERCC5R4GMW8 1640 aa29.59■■■□□ 2.33
ASIC3-201ENST00000297512 MRC2Q9UBG0 1479 aa29.59■■■□□ 2.33
ASIC3-201ENST00000297512 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
ASIC3-201ENST00000297512 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
ASIC3-201ENST00000297512 THOC2Q8NI27 1593 aaKnown RBP29.53■■■□□ 2.32
ASIC3-201ENST00000297512 FGD5Q6ZNL6 1462 aa29.46■■■□□ 2.31
ASIC3-201ENST00000297512 WDR62O43379 1518 aa29.46■■■□□ 2.31
ASIC3-201ENST00000297512 POLA1P09884 1462 aaPredicted RBP29.4■■■□□ 2.3
ASIC3-201ENST00000297512 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
ASIC3-201ENST00000297512 SOGA1O94964 1423 aa29.27■■■□□ 2.28
ASIC3-201ENST00000297512 CUX2O14529 1486 aa29.26■■■□□ 2.27
ASIC3-201ENST00000297512 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
ASIC3-201ENST00000297512 RUSC2Q8N2Y8 1516 aa29.22■■■□□ 2.27
ASIC3-201ENST00000297512 TARBP1Q13395 1621 aaKnown RBP29.18■■■□□ 2.26
ASIC3-201ENST00000297512 ABCA10Q8WWZ4 1543 aa29.15■■■□□ 2.26
ASIC3-201ENST00000297512 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
ASIC3-201ENST00000297512 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
ASIC3-201ENST00000297512 TDRD9Q8NDG6 1382 aaKnown RBP29.07■■■□□ 2.24
ASIC3-201ENST00000297512 KIF27Q86VH2 1401 aa29.06■■■□□ 2.24
ASIC3-201ENST00000297512 ZNF608Q9ULD9 1512 aaPredicted RBP29.05■■■□□ 2.24
ASIC3-201ENST00000297512 EEA1Q15075 1411 aa28.99■■■□□ 2.23
ASIC3-201ENST00000297512 ABCA5Q8WWZ7 1642 aa28.99■■■□□ 2.23
ASIC3-201ENST00000297512 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.231e-35■■■■■ 39.3
ASIC3-201ENST00000297512 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
ASIC3-201ENST00000297512 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
ASIC3-201ENST00000297512 CSRNP3Q8WYN3 585 aa28.93■■■□□ 2.22
ASIC3-201ENST00000297512 EHMT2Q96KQ7 1210 aa28.89■■■□□ 2.22
ASIC3-201ENST00000297512 IGF1RP08069 1367 aa28.87■■■□□ 2.21
ASIC3-201ENST00000297512 PBRM1Q86U86 1689 aa28.85■■■□□ 2.21
ASIC3-201ENST00000297512 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
ASIC3-201ENST00000297512 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
ASIC3-201ENST00000297512 GRIN2BQ13224 1484 aa28.79■■■□□ 2.2
ASIC3-201ENST00000297512 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
ASIC3-201ENST00000297512 CARMIL1Q5VZK9 1371 aa28.72■■■□□ 2.19
ASIC3-201ENST00000297512 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
ASIC3-201ENST00000297512 KIF21BO75037 1637 aa28.71■■■□□ 2.19
ASIC3-201ENST00000297512 RAPGEF2Q9Y4G8 1499 aa28.7■■■□□ 2.18
ASIC3-201ENST00000297512 CUL7Q14999 1698 aa28.7■■■□□ 2.18
ASIC3-201ENST00000297512 ADAMTS12P58397 1594 aa28.65■■■□□ 2.18
ASIC3-201ENST00000297512 GOLGA3Q08378 1498 aa28.63■■■□□ 2.17
ASIC3-201ENST00000297512 MAGI1Q96QZ7 1491 aaPredicted RBP28.6■■■□□ 2.17
ASIC3-201ENST00000297512 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
ASIC3-201ENST00000297512 UBTFP17480 764 aaKnown RBP28.55■■■□□ 2.16
ASIC3-201ENST00000297512 FBLN2P98095 1184 aa28.52■■■□□ 2.16
ASIC3-201ENST00000297512 SYNJ2O15056 1496 aa28.51■■■□□ 2.15
ASIC3-201ENST00000297512 CHMP7Q8WUX9 453 aaPredicted RBP28.47■■■□□ 2.15
ASIC3-201ENST00000297512 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
ASIC3-201ENST00000297512 CHD1O14646 1710 aa28.42■■■□□ 2.14
ASIC3-201ENST00000297512 TNIKQ9UKE5 1360 aa28.4■■■□□ 2.14
ASIC3-201ENST00000297512 RANGAP1P46060 587 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms