RNA–Protein interactions for RNA: ENST00000380762.4

HCCS-202, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCCS, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-202ENST00000380762 NISCHQ9Y2I1 1504 aa42.27■■■■■ 4.36
HCCS-202ENST00000380762 CCDC180Q9P1Z9 1646 aa37.43■■■■□ 3.58
HCCS-202ENST00000380762 ABCC9O60706 1549 aa36.57■■■■□ 3.44
HCCS-202ENST00000380762 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
HCCS-202ENST00000380762 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
HCCS-202ENST00000380762 RB1CC1Q8TDY2 1594 aa35.21■■■■□ 3.23
HCCS-202ENST00000380762 NACADO15069 1562 aa35.21■■■■□ 3.23
HCCS-202ENST00000380762 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.2
HCCS-202ENST00000380762 DCAF1Q9Y4B6 1507 aa34.95■■■■□ 3.19
HCCS-202ENST00000380762 UNC13AQ9UPW8 1703 aa34.33■■■■□ 3.09
HCCS-202ENST00000380762 PABPN1Q86U42 306 aaKnown RBP eCLIP34.27■■■■□ 3.08
HCCS-202ENST00000380762 SCRIBQ14160 1630 aa34.24■■■■□ 3.07
HCCS-202ENST00000380762 BICRAQ9NZM4 1560 aa34.09■■■■□ 3.05
HCCS-202ENST00000380762 SHROOM4Q9ULL8 1493 aa33.75■■■□□ 2.99
HCCS-202ENST00000380762 DNAJC5BQ9UF47 199 aa33.41■■■□□ 2.94
HCCS-202ENST00000380762 EIF4G1Q04637 1599 aaKnown RBP33.21■■■□□ 2.91
HCCS-202ENST00000380762 CC2D2AQ9P2K1 1620 aa33.03■■■□□ 2.88
HCCS-202ENST00000380762 CECR2Q9BXF3 1484 aa32.93■■■□□ 2.86
HCCS-202ENST00000380762 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
HCCS-202ENST00000380762 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
HCCS-202ENST00000380762 MROH2BQ7Z745 1585 aa32.58■■■□□ 2.81
HCCS-202ENST00000380762 ATAD2BQ9ULI0 1458 aa32.54■■■□□ 2.8
HCCS-202ENST00000380762 SMARCA2P51531 1590 aa32.51■■■□□ 2.79
HCCS-202ENST00000380762 NCAPD3P42695 1498 aa32.49■■■□□ 2.79
HCCS-202ENST00000380762 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
HCCS-202ENST00000380762 HMGXB3Q12766 1538 aa32.31■■■□□ 2.76
HCCS-202ENST00000380762 BAZ1BQ9UIG0 1483 aaKnown RBP32.31■■■□□ 2.76
HCCS-202ENST00000380762 RSF1Q96T23 1441 aaPredicted RBP32.3■■■□□ 2.76
HCCS-202ENST00000380762 WIZO95785 1651 aa32.23■■■□□ 2.75
HCCS-202ENST00000380762 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
HCCS-202ENST00000380762 SUPT5HO00267 1087 aaKnown RBP31.76■■■□□ 2.67
HCCS-202ENST00000380762 NESP48681 1621 aa31.67■■■□□ 2.66
HCCS-202ENST00000380762 CADPSQ9ULU8 1353 aa31.6■■■□□ 2.65
HCCS-202ENST00000380762 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
HCCS-202ENST00000380762 CCDC88BA6NC98 1476 aa31.57■■■□□ 2.64
HCCS-202ENST00000380762 ERCC6Q03468 1493 aa31.53■■■□□ 2.64
HCCS-202ENST00000380762 PDS5BQ9NTI5 1447 aa31.44■■■□□ 2.62
HCCS-202ENST00000380762 CFTRP13569 1480 aa31.41■■■□□ 2.62
HCCS-202ENST00000380762 KIF21AQ7Z4S6 1674 aa31.25■■■□□ 2.59
HCCS-202ENST00000380762 FANCD2Q9BXW9 1451 aa31.22■■■□□ 2.59
HCCS-202ENST00000380762 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
HCCS-202ENST00000380762 PRDM2Q13029 1718 aa31.1■■■□□ 2.57
HCCS-202ENST00000380762 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
HCCS-202ENST00000380762 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
HCCS-202ENST00000380762 CUX2O14529 1486 aa31.06■■■□□ 2.56
HCCS-202ENST00000380762 WDR62O43379 1518 aa30.92■■■□□ 2.54
HCCS-202ENST00000380762 URB2Q14146 1524 aaKnown RBP30.87■■■□□ 2.53
HCCS-202ENST00000380762 ABCC8Q09428 1581 aa30.75■■■□□ 2.51
HCCS-202ENST00000380762 TOPBP1Q92547 1522 aa30.73■■■□□ 2.51
HCCS-202ENST00000380762 DNMBPQ6XZF7 1577 aa30.69■■■□□ 2.5
HCCS-202ENST00000380762 CUX1P39880 1505 aa30.55■■■□□ 2.48
HCCS-202ENST00000380762 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
HCCS-202ENST00000380762 POLA1P09884 1462 aaPredicted RBP30.48■■■□□ 2.47
HCCS-202ENST00000380762 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
HCCS-202ENST00000380762 FGD5Q6ZNL6 1462 aa30.44■■■□□ 2.46
HCCS-202ENST00000380762 SOGA1O94964 1423 aa30.41■■■□□ 2.46
HCCS-202ENST00000380762 RAD54L2Q9Y4B4 1467 aa30.38■■■□□ 2.45
HCCS-202ENST00000380762 ZNF608Q9ULD9 1512 aaPredicted RBP30.34■■■□□ 2.45
HCCS-202ENST00000380762 TARBP1Q13395 1621 aaKnown RBP30.33■■■□□ 2.45
HCCS-202ENST00000380762 SYNJ1O43426 1573 aa30.33■■■□□ 2.45
HCCS-202ENST00000380762 TOP2BQ02880 1626 aa30.33■■■□□ 2.45
HCCS-202ENST00000380762 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
HCCS-202ENST00000380762 AQRO60306 1485 aaKnown RBP eCLIP30.24■■■□□ 2.435e-6■■■□□ 16.9
HCCS-202ENST00000380762 TDRD9Q8NDG6 1382 aaKnown RBP30.23■■■□□ 2.43
HCCS-202ENST00000380762 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.42
HCCS-202ENST00000380762 ABCA10Q8WWZ4 1543 aa30.13■■■□□ 2.41
HCCS-202ENST00000380762 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
HCCS-202ENST00000380762 GAPVD1Q14C86 1478 aa30.04■■■□□ 2.4
HCCS-202ENST00000380762 GRIN2BQ13224 1484 aa30■■■□□ 2.39
HCCS-202ENST00000380762 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
HCCS-202ENST00000380762 DNAJC5Q9H3Z4 198 aa29.96■■■□□ 2.39
HCCS-202ENST00000380762 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
HCCS-202ENST00000380762 FBLN2P98095 1184 aa29.94■■■□□ 2.38
HCCS-202ENST00000380762 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
HCCS-202ENST00000380762 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
HCCS-202ENST00000380762 PBRM1Q86U86 1689 aa29.88■■■□□ 2.37
HCCS-202ENST00000380762 MAGI1Q96QZ7 1491 aaPredicted RBP29.88■■■□□ 2.37
HCCS-202ENST00000380762 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
HCCS-202ENST00000380762 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
HCCS-202ENST00000380762 ERICH3Q5RHP9 1530 aa29.78■■■□□ 2.36
HCCS-202ENST00000380762 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
HCCS-202ENST00000380762 CHD1O14646 1710 aa29.76■■■□□ 2.36
HCCS-202ENST00000380762 FHAD1B1AJZ9 1412 aa29.7■■■□□ 2.34
HCCS-202ENST00000380762 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
HCCS-202ENST00000380762 IGF1RP08069 1367 aa29.68■■■□□ 2.34
HCCS-202ENST00000380762 ADAMTS12P58397 1594 aa29.68■■■□□ 2.34
HCCS-202ENST00000380762 GRIN2AQ12879 1464 aa29.61■■■□□ 2.33
HCCS-202ENST00000380762 RUSC2Q8N2Y8 1516 aa29.6■■■□□ 2.33
HCCS-202ENST00000380762 CUL7Q14999 1698 aa29.53■■■□□ 2.32
HCCS-202ENST00000380762 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
HCCS-202ENST00000380762 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.3
HCCS-202ENST00000380762 NUP160Q12769 1436 aa29.45■■■□□ 2.3
HCCS-202ENST00000380762 CEP170Q5SW79 1584 aa29.42■■■□□ 2.3
HCCS-202ENST00000380762 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
HCCS-202ENST00000380762 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
HCCS-202ENST00000380762 EEA1Q15075 1411 aa29.37■■■□□ 2.29
HCCS-202ENST00000380762 RAPGEF2Q9Y4G8 1499 aa29.36■■■□□ 2.29
HCCS-202ENST00000380762 ARHGEF11O15085 1522 aa29.33■■■□□ 2.29
HCCS-202ENST00000380762 RIMBP3CA6NJZ7 1639 aa29.31■■■□□ 2.28
HCCS-202ENST00000380762 RIMBP3BA6NNM3 1639 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms