RNA–Protein interactions for RNA: ENST00000609602.1

LINC00896-202, long intergenic non-protein coding RNA 896, humanhuman

BASIC

Gene LINC00896, Length 2,128 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00896-202ENST00000609602 NISCHQ9Y2I1 1504 aa39.31■■■■□ 3.88
LINC00896-202ENST00000609602 CCDC180Q9P1Z9 1646 aa34.56■■■■□ 3.12
LINC00896-202ENST00000609602 ABCC9O60706 1549 aa33.41■■■□□ 2.94
LINC00896-202ENST00000609602 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
LINC00896-202ENST00000609602 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
LINC00896-202ENST00000609602 DCAF1Q9Y4B6 1507 aa32.46■■■□□ 2.79
LINC00896-202ENST00000609602 NACADO15069 1562 aa32.38■■■□□ 2.77
LINC00896-202ENST00000609602 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
LINC00896-202ENST00000609602 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
LINC00896-202ENST00000609602 SHROOM4Q9ULL8 1493 aa31.76■■■□□ 2.68
LINC00896-202ENST00000609602 SCRIBQ14160 1630 aa31.73■■■□□ 2.67
LINC00896-202ENST00000609602 UNC13AQ9UPW8 1703 aa31.62■■■□□ 2.65
LINC00896-202ENST00000609602 PABPN1Q86U42 306 aaKnown RBP eCLIP31.39■■■□□ 2.61
LINC00896-202ENST00000609602 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
LINC00896-202ENST00000609602 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
LINC00896-202ENST00000609602 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.49
LINC00896-202ENST00000609602 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
LINC00896-202ENST00000609602 MROH2BQ7Z745 1585 aa30.39■■■□□ 2.45
LINC00896-202ENST00000609602 BAZ1AQ9NRL2 1556 aaPredicted RBP30.39■■■□□ 2.45
LINC00896-202ENST00000609602 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
LINC00896-202ENST00000609602 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
LINC00896-202ENST00000609602 CHIC1Q5VXU3 224 aa30.27■■■□□ 2.44
LINC00896-202ENST00000609602 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
LINC00896-202ENST00000609602 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
LINC00896-202ENST00000609602 WIZO95785 1651 aa30.12■■■□□ 2.41
LINC00896-202ENST00000609602 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
LINC00896-202ENST00000609602 PEG3Q9GZU2 1588 aa30.02■■■□□ 2.4
LINC00896-202ENST00000609602 SMARCA2P51531 1590 aa29.99■■■□□ 2.39
LINC00896-202ENST00000609602 NCAPD3P42695 1498 aa29.92■■■□□ 2.38
LINC00896-202ENST00000609602 BAZ1BQ9UIG0 1483 aaKnown RBP29.83■■■□□ 2.37
LINC00896-202ENST00000609602 HMGXB3Q12766 1538 aa29.79■■■□□ 2.36
LINC00896-202ENST00000609602 TOP2AP11388 1531 aaKnown RBP29.75■■■□□ 2.35
LINC00896-202ENST00000609602 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.31
LINC00896-202ENST00000609602 LOC105371045A0A1W2PR82 267 aa29.24■■■□□ 2.27
LINC00896-202ENST00000609602 HRCP23327 699 aa29.21■■■□□ 2.27
LINC00896-202ENST00000609602 PCGF6Q9BYE7 350 aa29.14■■■□□ 2.25
LINC00896-202ENST00000609602 NESP48681 1621 aa29.11■■■□□ 2.25
LINC00896-202ENST00000609602 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
LINC00896-202ENST00000609602 CFTRP13569 1480 aa29.05■■■□□ 2.24
LINC00896-202ENST00000609602 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
LINC00896-202ENST00000609602 LAMC3Q9Y6N6 1575 aa29■■■□□ 2.23
LINC00896-202ENST00000609602 PRDM2Q13029 1718 aa28.81■■■□□ 2.2
LINC00896-202ENST00000609602 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
LINC00896-202ENST00000609602 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
LINC00896-202ENST00000609602 TRIM26Q12899 539 aaPredicted RBP28.74■■■□□ 2.19
LINC00896-202ENST00000609602 KIF21AQ7Z4S6 1674 aa28.72■■■□□ 2.19
LINC00896-202ENST00000609602 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
LINC00896-202ENST00000609602 ERCC6Q03468 1493 aa28.7■■■□□ 2.19
LINC00896-202ENST00000609602 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
LINC00896-202ENST00000609602 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
LINC00896-202ENST00000609602 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
LINC00896-202ENST00000609602 SYNJ1O43426 1573 aa28.48■■■□□ 2.15
LINC00896-202ENST00000609602 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
LINC00896-202ENST00000609602 URB2Q14146 1524 aaKnown RBP28.47■■■□□ 2.15
LINC00896-202ENST00000609602 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.15
LINC00896-202ENST00000609602 CUX1P39880 1505 aa28.44■■■□□ 2.14
LINC00896-202ENST00000609602 PPARGC1BQ86YN6 1023 aaKnown RBP28.44■■■□□ 2.14
LINC00896-202ENST00000609602 TOPBP1Q92547 1522 aa28.38■■■□□ 2.13
LINC00896-202ENST00000609602 WDR62O43379 1518 aa28.37■■■□□ 2.13
LINC00896-202ENST00000609602 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
LINC00896-202ENST00000609602 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
LINC00896-202ENST00000609602 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
LINC00896-202ENST00000609602 EHMT2Q96KQ7 1210 aa28.25■■■□□ 2.11
LINC00896-202ENST00000609602 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
LINC00896-202ENST00000609602 POLA1P09884 1462 aaPredicted RBP28.2■■■□□ 2.11
LINC00896-202ENST00000609602 CUX2O14529 1486 aa28.14■■■□□ 2.1
LINC00896-202ENST00000609602 ZEB1P37275 1124 aaPredicted RBP28.14■■■□□ 2.1
LINC00896-202ENST00000609602 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
LINC00896-202ENST00000609602 SOGA1O94964 1423 aa28.09■■■□□ 2.09
LINC00896-202ENST00000609602 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
LINC00896-202ENST00000609602 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
LINC00896-202ENST00000609602 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
LINC00896-202ENST00000609602 EEA1Q15075 1411 aa27.97■■■□□ 2.07
LINC00896-202ENST00000609602 ABCA10Q8WWZ4 1543 aa27.94■■■□□ 2.06
LINC00896-202ENST00000609602 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
LINC00896-202ENST00000609602 WDR97A6NE52 1622 aa27.91■■■□□ 2.06
LINC00896-202ENST00000609602 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
LINC00896-202ENST00000609602 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.05
LINC00896-202ENST00000609602 TNIKQ9UKE5 1360 aa27.86■■■□□ 2.05
LINC00896-202ENST00000609602 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
LINC00896-202ENST00000609602 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
LINC00896-202ENST00000609602 CSRNP3Q8WYN3 585 aa27.82■■■□□ 2.04
LINC00896-202ENST00000609602 EIF4G3O43432 1585 aaKnown RBP27.79■■■□□ 2.04
LINC00896-202ENST00000609602 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
LINC00896-202ENST00000609602 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
LINC00896-202ENST00000609602 GOLGA3Q08378 1498 aa27.7■■■□□ 2.02
LINC00896-202ENST00000609602 IGF1RP08069 1367 aa27.66■■■□□ 2.02
LINC00896-202ENST00000609602 GRIN2BQ13224 1484 aa27.65■■■□□ 2.02
LINC00896-202ENST00000609602 PBRM1Q86U86 1689 aa27.63■■■□□ 2.01
LINC00896-202ENST00000609602 UBTFP17480 764 aaKnown RBP27.6■■■□□ 2.01
LINC00896-202ENST00000609602 ERICH3Q5RHP9 1530 aa27.6■■■□□ 2.01
LINC00896-202ENST00000609602 KIF21BO75037 1637 aa27.57■■■□□ 2
LINC00896-202ENST00000609602 SNAPC4Q5SXM2 1469 aa27.57■■■□□ 2
LINC00896-202ENST00000609602 PRXQ9BXM0 1461 aa27.53■■■□□ 2
LINC00896-202ENST00000609602 CARMIL1Q5VZK9 1371 aa27.5■■□□□ 1.99
LINC00896-202ENST00000609602 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
LINC00896-202ENST00000609602 RAPGEF2Q9Y4G8 1499 aa27.49■■□□□ 1.99
LINC00896-202ENST00000609602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.48■■□□□ 1.99
LINC00896-202ENST00000609602 CUL7Q14999 1698 aa27.48■■□□□ 1.99
LINC00896-202ENST00000609602 ADAMTS12P58397 1594 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms