Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ARFGAP2-206ENST00000525314 785 ntTSL 312□□□□□ -0.499e-6■□□□□ 8.7
SRSF1Q07955 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC11.97□□□□□ -0.492e-7■□□□□ 8.7
SRSF1Q07955 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.94□□□□□ -0.52e-7■□□□□ 8.7
SRSF1Q07955 ARFGAP2-224ENST00000531750 649 ntTSL 411.9□□□□□ -0.59e-6■□□□□ 8.7
SRSF1Q07955 MAN2A2-222ENST00000560505 643 ntTSL 211.89□□□□□ -0.519e-6■□□□□ 8.7
SRSF1Q07955 RABL6-206ENST00000436380 2547 ntAPPRIS ALT2 TSL 211.63□□□□□ -0.559e-6■□□□□ 8.7
SRSF1Q07955 RRP1-201ENST00000467112 3019 ntTSL 1 (best)11.42□□□□□ -0.589e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.24□□□□□ -0.619e-6■□□□□ 8.7
SRSF1Q07955 ZBED9-204ENST00000530247 755 ntTSL 211.16□□□□□ -0.627e-8■□□□□ 8.7
SRSF1Q07955 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.1□□□□□ -0.639e-6■□□□□ 8.7
SRSF1Q07955 EML3-213ENST00000494448 3665 ntTSL 211.07□□□□□ -0.649e-6■□□□□ 8.7
SRSF1Q07955 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.96□□□□□ -0.652e-7■□□□□ 8.7
SRSF1Q07955 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.679e-6■□□□□ 8.7
SRSF1Q07955 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.689e-6■□□□□ 8.7
SRSF1Q07955 MTHFR-208ENST00000423400 479 ntTSL 1 (best)10.78□□□□□ -0.682e-7■□□□□ 8.7
SRSF1Q07955 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.689e-6■□□□□ 8.7
SRSF1Q07955 PPP6R3-225ENST00000534190 1980 ntTSL 210.76□□□□□ -0.699e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-204ENST00000420970 1060 ntTSL 510.74□□□□□ -0.699e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-205ENST00000426396 641 ntTSL 510.74□□□□□ -0.699e-6■□□□□ 8.7
SRSF1Q07955 MOV10-207ENST00000471160 493 ntTSL 310.56□□□□□ -0.729e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-215ENST00000528041 578 ntTSL 410.53□□□□□ -0.729e-6■□□□□ 8.7
SRSF1Q07955 TPM3-202ENST00000302206 741 ntTSL 3 BASIC10.52□□□□□ -0.732e-7■□□□□ 8.7
SRSF1Q07955 SETD5-227ENST00000492939 634 ntTSL 210.52□□□□□ -0.739e-6■□□□□ 8.7
SRSF1Q07955 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.51□□□□□ -0.739e-6■□□□□ 8.7
SRSF1Q07955 MAN2A2-202ENST00000557865 2671 ntTSL 210.49□□□□□ -0.739e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-218ENST00000528708 550 ntTSL 310.47□□□□□ -0.739e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-228ENST00000533939 577 ntTSL 310.47□□□□□ -0.739e-6■□□□□ 8.7
SRSF1Q07955 MOV10-213ENST00000488160 896 ntTSL 210.26□□□□□ -0.779e-6■□□□□ 8.7
SRSF1Q07955 SETD5-224ENST00000486465 886 ntTSL 210.12□□□□□ -0.799e-6■□□□□ 8.7
SRSF1Q07955 MOV10-211ENST00000482545 380 ntTSL 510.11□□□□□ -0.799e-6■□□□□ 8.7
SRSF1Q07955 MTHFR-209ENST00000431243 1116 ntTSL 1 (best)9.73□□□□□ -0.852e-7■□□□□ 8.7
SRSF1Q07955 TPM3-210ENST00000368530 1523 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.852e-7■□□□□ 8.7
SRSF1Q07955 SLC25A17-210ENST00000435456 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.859e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-221ENST00000529599 555 ntTSL 49.55□□□□□ -0.889e-6■□□□□ 8.7
SRSF1Q07955 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC9.4□□□□□ -0.92e-7■□□□□ 8.7
SRSF1Q07955 ZWINT-201ENST00000318387 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.919e-6■□□□□ 8.7
SRSF1Q07955 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC9.38□□□□□ -0.919e-6■□□□□ 8.7
SRSF1Q07955 LRRC14-207ENST00000530242 93 ntTSL 39.38□□□□□ -0.919e-6■□□□□ 8.7
SRSF1Q07955 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC9.25□□□□□ -0.932e-7■□□□□ 8.7
SRSF1Q07955 SLC25A17-209ENST00000434193 598 ntTSL 49.21□□□□□ -0.949e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-213ENST00000449676 533 ntTSL 49.2□□□□□ -0.949e-6■□□□□ 8.7
SRSF1Q07955 PPP6R3-226ENST00000534534 2968 ntTSL 2 BASIC9.18□□□□□ -0.949e-6■□□□□ 8.7
SRSF1Q07955 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.992e-7■□□□□ 8.7
SRSF1Q07955 TPM3-218ENST00000505010 540 ntTSL 28.85□□□□□ -0.992e-7■□□□□ 8.7
SRSF1Q07955 PPP6R3-205ENST00000524845 2771 ntTSL 1 (best) BASIC8.83□□□□□ -19e-6■□□□□ 8.7
SRSF1Q07955 PPP6R3-201ENST00000265636 4794 ntTSL 1 (best) BASIC8.75□□□□□ -1.019e-6■□□□□ 8.7
SRSF1Q07955 PPP6R3-203ENST00000393800 5093 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.019e-6■□□□□ 8.7
SRSF1Q07955 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC8.7□□□□□ -1.029e-6■□□□□ 8.7
SRSF1Q07955 SETD5-208ENST00000421188 1323 ntTSL 58.69□□□□□ -1.029e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-223ENST00000530794 451 ntTSL 28.61□□□□□ -1.039e-6■□□□□ 8.7
SRSF1Q07955 TPM3-212ENST00000368533 3131 ntTSL 1 (best) BASIC8.6□□□□□ -1.032e-7■□□□□ 8.7
SRSF1Q07955 NCAPD2-207ENST00000539084 4290 ntTSL 28.39□□□□□ -1.079e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-207ENST00000430221 734 ntTSL 48.31□□□□□ -1.089e-6■□□□□ 8.7
SRSF1Q07955 TOP3B-209ENST00000442653 400 ntTSL 38.3□□□□□ -1.082e-7■□□□□ 8.7
SRSF1Q07955 SF3B3-207ENST00000566095 453 ntTSL 38.29□□□□□ -1.089e-6■□□□□ 8.7
SRSF1Q07955 SLC25A17-201ENST00000263255 2058 ntTSL 1 (best)8.25□□□□□ -1.099e-6■□□□□ 8.7
SRSF1Q07955 PPP6R3-202ENST00000265637 4783 ntTSL 5 BASIC8.16□□□□□ -1.19e-6■□□□□ 8.7
SRSF1Q07955 TPM3-203ENST00000312970 750 ntTSL 58.13□□□□□ -1.112e-7■□□□□ 8.7
SRSF1Q07955 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC8□□□□□ -1.139e-6■□□□□ 8.7
SRSF1Q07955 TPM3-209ENST00000368527 569 ntTSL 47.78□□□□□ -1.162e-7■□□□□ 8.7
SRSF1Q07955 SLC25A17-212ENST00000447566 1243 ntTSL 57.48□□□□□ -1.219e-6■□□□□ 8.7
SRSF1Q07955 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.231e-10■□□□□ 8.7
SRSF1Q07955 KLHDC10-204ENST00000495724 370 ntTSL 37.31□□□□□ -1.249e-6■□□□□ 8.7
SRSF1Q07955 WDR26-202ENST00000443112 1306 ntTSL 1 (best)7.15□□□□□ -1.269e-6■□□□□ 8.7
SRSF1Q07955 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC7.07□□□□□ -1.289e-6■□□□□ 8.7
SRSF1Q07955 KPNA6-204ENST00000471599 3941 ntTSL 27.01□□□□□ -1.297e-8■□□□□ 8.7
SRSF1Q07955 SLC25A17-216ENST00000491545 2530 ntTSL 1 (best)6.75□□□□□ -1.339e-6■□□□□ 8.7
SRSF1Q07955 KLHDC10-203ENST00000468226 772 ntTSL 36.63□□□□□ -1.359e-6■□□□□ 8.7
SRSF1Q07955 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.389e-6■□□□□ 8.7
SRSF1Q07955 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.397e-8■□□□□ 8.7
SRSF1Q07955 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.399e-6■□□□□ 8.7
SRSF1Q07955 TPM3-215ENST00000469717 4041 ntTSL 26.15□□□□□ -1.432e-7■□□□□ 8.7
SRSF1Q07955 CDK1-205ENST00000475504 1720 ntTSL 26.05□□□□□ -1.441e-10■□□□□ 8.7
SRSF1Q07955 PPP6R3-210ENST00000526307 4134 ntTSL 26.02□□□□□ -1.459e-6■□□□□ 8.7
SRSF1Q07955 SETD5-206ENST00000413704 3428 ntTSL 25.8□□□□□ -1.489e-6■□□□□ 8.7
SRSF1Q07955 SETD5-202ENST00000399686 3362 ntTSL 55.68□□□□□ -1.59e-6■□□□□ 8.7
SRSF1Q07955 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.45□□□□□ -1.549e-6■□□□□ 8.7
SRSF1Q07955 CDK1-207ENST00000519078 723 ntTSL 35.39□□□□□ -1.551e-10■□□□□ 8.7
SRSF1Q07955 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.35□□□□□ -1.552e-7■□□□□ 8.7
SRSF1Q07955 SETD5-217ENST00000466242 4038 ntTSL 25.05□□□□□ -1.69e-6■□□□□ 8.7
SRSF1Q07955 CCNL1-206ENST00000464679 534 ntTSL 34.77□□□□□ -1.656e-12■□□□□ 8.7
SRSF1Q07955 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.71□□□□□ -1.662e-7■□□□□ 8.7
SRSF1Q07955 SF3B3-210ENST00000567654 334 ntTSL 34.69□□□□□ -1.669e-6■□□□□ 8.7
SRSF1Q07955 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.67□□□□□ -1.661e-10■□□□□ 8.7
SRSF1Q07955 SF3B3-213ENST00000569687 333 ntTSL 44.25□□□□□ -1.739e-6■□□□□ 8.7
SRSF1Q07955 CCNL1-224ENST00000483789 667 ntTSL 23.97□□□□□ -1.776e-12■□□□□ 8.7
SRSF1Q07955 WDR26-204ENST00000477425 529 ntTSL 33.91□□□□□ -1.789e-6■□□□□ 8.7
SRSF1Q07955 WDR26-206ENST00000479778 2552 ntTSL 23.89□□□□□ -1.799e-6■□□□□ 8.7
SRSF1Q07955 CCNL1-215ENST00000474539 4799 ntTSL 1 (best)3.75□□□□□ -1.816e-12■□□□□ 8.7
SRSF1Q07955 WDR26-209ENST00000489825 751 ntTSL 53.48□□□□□ -1.859e-6■□□□□ 8.7
SRSF1Q07955 CCNL1-221ENST00000479052 458 ntTSL 33.32□□□□□ -1.886e-12■□□□□ 8.7
SRSF1Q07955 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.27□□□□□ -1.891e-10■□□□□ 8.7
SRSF1Q07955 CCNL1-204ENST00000464316 3843 ntTSL 1 (best)3.16□□□□□ -1.96e-12■□□□□ 8.7
SRSF1Q07955 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.04□□□□□ -1.921e-10■□□□□ 8.7
SRSF1Q07955 CCNL1-214ENST00000471247 3671 ntTSL 1 (best)2.46□□□□□ -2.026e-12■□□□□ 8.7
SRSF1Q07955 TANK-223ENST00000494976 636 ntTSL 314.48□□□□□ -0.096e-9■□□□□ 8.7
SRSF1Q07955 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.276e-9■□□□□ 8.7
SRSF1Q07955 TANK-215ENST00000457887 762 ntTSL 513.32□□□□□ -0.286e-9■□□□□ 8.7
SRSF1Q07955 TANK-207ENST00000429217 762 ntTSL 58.59□□□□□ -1.036e-9■□□□□ 8.7
SRSF1Q07955 TANK-216ENST00000461338 674 ntTSL 38.59□□□□□ -1.036e-9■□□□□ 8.7
Retrieved 100 of 14,836 protein–RNA pairs in 46.1 ms