RNA–Protein interactions for RNA: ENST00000431243.6

MTHFR-209, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 1,116 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-209ENST00000431243 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
MTHFR-209ENST00000431243 ABCC9O60706 1549 aa22.06■■□□□ 1.12
MTHFR-209ENST00000431243 CCDC180Q9P1Z9 1646 aa21.93■■□□□ 1.1
MTHFR-209ENST00000431243 RB1CC1Q8TDY2 1594 aa20.98■□□□□ 0.95
MTHFR-209ENST00000431243 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
MTHFR-209ENST00000431243 NACADO15069 1562 aa20.82■□□□□ 0.92
MTHFR-209ENST00000431243 DCAF8L2P0C7V8 631 aa20.57■□□□□ 0.88
MTHFR-209ENST00000431243 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
MTHFR-209ENST00000431243 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
MTHFR-209ENST00000431243 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.85
MTHFR-209ENST00000431243 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
MTHFR-209ENST00000431243 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
MTHFR-209ENST00000431243 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
MTHFR-209ENST00000431243 ZCCHC6Q5VYS8 1495 aaKnown RBP20.13■□□□□ 0.81
MTHFR-209ENST00000431243 CECR2Q9BXF3 1484 aa19.94■□□□□ 0.78
MTHFR-209ENST00000431243 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
MTHFR-209ENST00000431243 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
MTHFR-209ENST00000431243 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
MTHFR-209ENST00000431243 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
MTHFR-209ENST00000431243 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
MTHFR-209ENST00000431243 CUX2O14529 1486 aa19.19■□□□□ 0.66
MTHFR-209ENST00000431243 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
MTHFR-209ENST00000431243 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
MTHFR-209ENST00000431243 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
MTHFR-209ENST00000431243 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
MTHFR-209ENST00000431243 SMARCA4P51532 1647 aa19■□□□□ 0.63
MTHFR-209ENST00000431243 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
MTHFR-209ENST00000431243 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
MTHFR-209ENST00000431243 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.61
MTHFR-209ENST00000431243 NESP48681 1621 aa18.88■□□□□ 0.61
MTHFR-209ENST00000431243 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
MTHFR-209ENST00000431243 THOC2Q8NI27 1593 aaKnown RBP18.75■□□□□ 0.59
MTHFR-209ENST00000431243 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
MTHFR-209ENST00000431243 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
MTHFR-209ENST00000431243 CADPSQ9ULU8 1353 aa18.64■□□□□ 0.57
MTHFR-209ENST00000431243 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
MTHFR-209ENST00000431243 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
MTHFR-209ENST00000431243 WDR62O43379 1518 aa18.49■□□□□ 0.55
MTHFR-209ENST00000431243 WIZO95785 1651 aa18.44■□□□□ 0.54
MTHFR-209ENST00000431243 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
MTHFR-209ENST00000431243 CFTRP13569 1480 aa18.38■□□□□ 0.53
MTHFR-209ENST00000431243 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
MTHFR-209ENST00000431243 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
MTHFR-209ENST00000431243 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
MTHFR-209ENST00000431243 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
MTHFR-209ENST00000431243 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
MTHFR-209ENST00000431243 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
MTHFR-209ENST00000431243 IFT140Q96RY7 1462 aa18.08■□□□□ 0.49
MTHFR-209ENST00000431243 PRDM2Q13029 1718 aa18.08■□□□□ 0.48
MTHFR-209ENST00000431243 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
MTHFR-209ENST00000431243 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
MTHFR-209ENST00000431243 ZNF608Q9ULD9 1512 aaPredicted RBP18.01■□□□□ 0.47
MTHFR-209ENST00000431243 TOPBP1Q92547 1522 aa18■□□□□ 0.47
MTHFR-209ENST00000431243 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
MTHFR-209ENST00000431243 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
MTHFR-209ENST00000431243 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
MTHFR-209ENST00000431243 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
MTHFR-209ENST00000431243 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
MTHFR-209ENST00000431243 CHIC1Q5VXU3 224 aa17.92■□□□□ 0.46
MTHFR-209ENST00000431243 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
MTHFR-209ENST00000431243 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
MTHFR-209ENST00000431243 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.455e-7■■□□□ 13.8
MTHFR-209ENST00000431243 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
MTHFR-209ENST00000431243 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
MTHFR-209ENST00000431243 CHD1O14646 1710 aa17.75■□□□□ 0.43
MTHFR-209ENST00000431243 SOGA1O94964 1423 aa17.75■□□□□ 0.43
MTHFR-209ENST00000431243 FBLN2P98095 1184 aa17.75■□□□□ 0.43
MTHFR-209ENST00000431243 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
MTHFR-209ENST00000431243 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
MTHFR-209ENST00000431243 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
MTHFR-209ENST00000431243 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
MTHFR-209ENST00000431243 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
MTHFR-209ENST00000431243 FGD5Q6ZNL6 1462 aa17.65■□□□□ 0.42
MTHFR-209ENST00000431243 MAGI1Q96QZ7 1491 aaPredicted RBP17.65■□□□□ 0.42
MTHFR-209ENST00000431243 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
MTHFR-209ENST00000431243 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
MTHFR-209ENST00000431243 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
MTHFR-209ENST00000431243 CLASP1Q7Z460 1538 aa17.62■□□□□ 0.41
MTHFR-209ENST00000431243 SYNJ1O43426 1573 aa17.61■□□□□ 0.41
MTHFR-209ENST00000431243 CUX1P39880 1505 aa17.6■□□□□ 0.41
MTHFR-209ENST00000431243 SYNJ2O15056 1496 aa17.58■□□□□ 0.41
MTHFR-209ENST00000431243 GAPVD1Q14C86 1478 aa17.51■□□□□ 0.39
MTHFR-209ENST00000431243 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
MTHFR-209ENST00000431243 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
MTHFR-209ENST00000431243 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
MTHFR-209ENST00000431243 WRNQ14191 1432 aaPredicted RBP eCLIP17.4■□□□□ 0.38
MTHFR-209ENST00000431243 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
MTHFR-209ENST00000431243 NUP160Q12769 1436 aa17.35■□□□□ 0.37
MTHFR-209ENST00000431243 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
MTHFR-209ENST00000431243 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
MTHFR-209ENST00000431243 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
MTHFR-209ENST00000431243 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
MTHFR-209ENST00000431243 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
MTHFR-209ENST00000431243 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
MTHFR-209ENST00000431243 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
MTHFR-209ENST00000431243 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
MTHFR-209ENST00000431243 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
MTHFR-209ENST00000431243 SHROOM2Q13796 1616 aa17.26■□□□□ 0.35
MTHFR-209ENST00000431243 JPH4Q96JJ6 628 aa17.18■□□□□ 0.34
MTHFR-209ENST00000431243 PRG4Q92954 1404 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms