RNA–Protein interactions for RNA: ENST00000423400.6

MTHFR-208, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-208ENST00000423400 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
MTHFR-208ENST00000423400 ABCC9O60706 1549 aa24.56■■□□□ 1.52
MTHFR-208ENST00000423400 CCDC180Q9P1Z9 1646 aa24.23■■□□□ 1.47
MTHFR-208ENST00000423400 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
MTHFR-208ENST00000423400 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
MTHFR-208ENST00000423400 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
MTHFR-208ENST00000423400 NACADO15069 1562 aa23.04■■□□□ 1.28
MTHFR-208ENST00000423400 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
MTHFR-208ENST00000423400 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
MTHFR-208ENST00000423400 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
MTHFR-208ENST00000423400 UNC13AQ9UPW8 1703 aa22.53■■□□□ 1.2
MTHFR-208ENST00000423400 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
MTHFR-208ENST00000423400 DCAF1Q9Y4B6 1507 aa22.33■■□□□ 1.17
MTHFR-208ENST00000423400 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
MTHFR-208ENST00000423400 SCRIBQ14160 1630 aa22.2■■□□□ 1.14
MTHFR-208ENST00000423400 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
MTHFR-208ENST00000423400 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
MTHFR-208ENST00000423400 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
MTHFR-208ENST00000423400 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
MTHFR-208ENST00000423400 NCAPD3P42695 1498 aa21.32■■□□□ 1
MTHFR-208ENST00000423400 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
MTHFR-208ENST00000423400 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
MTHFR-208ENST00000423400 CUX2O14529 1486 aa21.16■□□□□ 0.98
MTHFR-208ENST00000423400 SMARCA2P51531 1590 aa21.14■□□□□ 0.97
MTHFR-208ENST00000423400 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
MTHFR-208ENST00000423400 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
MTHFR-208ENST00000423400 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
MTHFR-208ENST00000423400 NESP48681 1621 aa21.04■□□□□ 0.96
MTHFR-208ENST00000423400 BAZ1AQ9NRL2 1556 aaPredicted RBP21.03■□□□□ 0.96
MTHFR-208ENST00000423400 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
MTHFR-208ENST00000423400 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.94
MTHFR-208ENST00000423400 LAMC3Q9Y6N6 1575 aa20.8■□□□□ 0.92
MTHFR-208ENST00000423400 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
MTHFR-208ENST00000423400 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
MTHFR-208ENST00000423400 CADPSQ9ULU8 1353 aa20.72■□□□□ 0.91
MTHFR-208ENST00000423400 KIF21AQ7Z4S6 1674 aa20.62■□□□□ 0.89
MTHFR-208ENST00000423400 WIZO95785 1651 aa20.58■□□□□ 0.89
MTHFR-208ENST00000423400 MRC2Q9UBG0 1479 aa20.57■□□□□ 0.88
MTHFR-208ENST00000423400 WDR62O43379 1518 aa20.48■□□□□ 0.87
MTHFR-208ENST00000423400 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
MTHFR-208ENST00000423400 RSF1Q96T23 1441 aaPredicted RBP20.46■□□□□ 0.87
MTHFR-208ENST00000423400 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
MTHFR-208ENST00000423400 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
MTHFR-208ENST00000423400 CFTRP13569 1480 aa20.41■□□□□ 0.86
MTHFR-208ENST00000423400 TOP2AP11388 1531 aaKnown RBP20.34■□□□□ 0.85
MTHFR-208ENST00000423400 OSCARQ8IYS5 282 aa20.29■□□□□ 0.84
MTHFR-208ENST00000423400 URB2Q14146 1524 aaKnown RBP20.27■□□□□ 0.83
MTHFR-208ENST00000423400 CCDC88BA6NC98 1476 aa20.18■□□□□ 0.82
MTHFR-208ENST00000423400 IFT140Q96RY7 1462 aa20.08■□□□□ 0.81
MTHFR-208ENST00000423400 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
MTHFR-208ENST00000423400 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
MTHFR-208ENST00000423400 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
MTHFR-208ENST00000423400 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
MTHFR-208ENST00000423400 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
MTHFR-208ENST00000423400 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.785e-7■■□□□ 13.8
MTHFR-208ENST00000423400 FBLN2P98095 1184 aa19.89■□□□□ 0.77
MTHFR-208ENST00000423400 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
MTHFR-208ENST00000423400 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
MTHFR-208ENST00000423400 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
MTHFR-208ENST00000423400 EIF4G3O43432 1585 aaKnown RBP19.86■□□□□ 0.77
MTHFR-208ENST00000423400 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
MTHFR-208ENST00000423400 CYB5RLQ6IPT4 315 aa19.85■□□□□ 0.77
MTHFR-208ENST00000423400 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
MTHFR-208ENST00000423400 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
MTHFR-208ENST00000423400 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
MTHFR-208ENST00000423400 SOGA1O94964 1423 aa19.79■□□□□ 0.76
MTHFR-208ENST00000423400 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
MTHFR-208ENST00000423400 TRHP20396 242 aaPredicted RBP19.7■□□□□ 0.74
MTHFR-208ENST00000423400 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
MTHFR-208ENST00000423400 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
MTHFR-208ENST00000423400 CHD1O14646 1710 aa19.67■□□□□ 0.74
MTHFR-208ENST00000423400 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
MTHFR-208ENST00000423400 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
MTHFR-208ENST00000423400 CUX1P39880 1505 aa19.63■□□□□ 0.73
MTHFR-208ENST00000423400 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
MTHFR-208ENST00000423400 GRIN2BQ13224 1484 aa19.59■□□□□ 0.73
MTHFR-208ENST00000423400 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.72
MTHFR-208ENST00000423400 WDR97A6NE52 1622 aa19.55■□□□□ 0.72
MTHFR-208ENST00000423400 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
MTHFR-208ENST00000423400 CLASP1Q7Z460 1538 aa19.52■□□□□ 0.72
MTHFR-208ENST00000423400 SYNJ1O43426 1573 aa19.52■□□□□ 0.71
MTHFR-208ENST00000423400 GAPVD1Q14C86 1478 aa19.51■□□□□ 0.71
MTHFR-208ENST00000423400 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
MTHFR-208ENST00000423400 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
MTHFR-208ENST00000423400 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
MTHFR-208ENST00000423400 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
MTHFR-208ENST00000423400 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
MTHFR-208ENST00000423400 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.68
MTHFR-208ENST00000423400 NUP160Q12769 1436 aa19.26■□□□□ 0.67
MTHFR-208ENST00000423400 ADAMTS12P58397 1594 aa19.24■□□□□ 0.67
MTHFR-208ENST00000423400 ERCC6L2Q5T890 1561 aa19.24■□□□□ 0.67
MTHFR-208ENST00000423400 TOP2BQ02880 1626 aa19.24■□□□□ 0.67
MTHFR-208ENST00000423400 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
MTHFR-208ENST00000423400 AEBP2Q6ZN18 517 aaPredicted RBP19.2■□□□□ 0.66
MTHFR-208ENST00000423400 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
MTHFR-208ENST00000423400 ERICH3Q5RHP9 1530 aa19.17■□□□□ 0.66
MTHFR-208ENST00000423400 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
MTHFR-208ENST00000423400 PRG4Q92954 1404 aaPredicted RBP19.14■□□□□ 0.65
MTHFR-208ENST00000423400 SHROOM2Q13796 1616 aa19.09■□□□□ 0.65
MTHFR-208ENST00000423400 NPM1P06748 294 aaKnown RBP eCLIP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms