RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 NISCHQ9Y2I1 1504 aa21.11■□□□□ 0.97
TOP3B-209ENST00000442653 ABCC9O60706 1549 aa19.05■□□□□ 0.64
TOP3B-209ENST00000442653 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
TOP3B-209ENST00000442653 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
TOP3B-209ENST00000442653 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
TOP3B-209ENST00000442653 NACADO15069 1562 aa17.93■□□□□ 0.46
TOP3B-209ENST00000442653 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
TOP3B-209ENST00000442653 DCAF8L2P0C7V8 631 aa17.82■□□□□ 0.44
TOP3B-209ENST00000442653 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
TOP3B-209ENST00000442653 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
TOP3B-209ENST00000442653 MYO15BQ96JP2 1530 aa17.66■□□□□ 0.42
TOP3B-209ENST00000442653 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
TOP3B-209ENST00000442653 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
TOP3B-209ENST00000442653 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
TOP3B-209ENST00000442653 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
TOP3B-209ENST00000442653 SCRIBQ14160 1630 aa17.3■□□□□ 0.36
TOP3B-209ENST00000442653 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
TOP3B-209ENST00000442653 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
TOP3B-209ENST00000442653 CECR2Q9BXF3 1484 aa17.15■□□□□ 0.34
TOP3B-209ENST00000442653 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
TOP3B-209ENST00000442653 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
TOP3B-209ENST00000442653 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.23
TOP3B-209ENST00000442653 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
TOP3B-209ENST00000442653 SMARCA4P51532 1647 aa16.48■□□□□ 0.23
TOP3B-209ENST00000442653 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
TOP3B-209ENST00000442653 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
TOP3B-209ENST00000442653 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
TOP3B-209ENST00000442653 CUX2O14529 1486 aa16.41■□□□□ 0.22
TOP3B-209ENST00000442653 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
TOP3B-209ENST00000442653 NESP48681 1621 aa16.36■□□□□ 0.21
TOP3B-209ENST00000442653 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
TOP3B-209ENST00000442653 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.2
TOP3B-209ENST00000442653 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
TOP3B-209ENST00000442653 THOC2Q8NI27 1593 aaKnown RBP16.19■□□□□ 0.18
TOP3B-209ENST00000442653 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
TOP3B-209ENST00000442653 KIF21AQ7Z4S6 1674 aa16.12■□□□□ 0.17
TOP3B-209ENST00000442653 PDS5BQ9NTI5 1447 aa16.09■□□□□ 0.17
TOP3B-209ENST00000442653 WIZO95785 1651 aa16.08■□□□□ 0.16
TOP3B-209ENST00000442653 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
TOP3B-209ENST00000442653 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
TOP3B-209ENST00000442653 WDR62O43379 1518 aa15.95■□□□□ 0.14
TOP3B-209ENST00000442653 RSF1Q96T23 1441 aaPredicted RBP15.92■□□□□ 0.14
TOP3B-209ENST00000442653 CEP164Q9UPV0 1460 aa15.9■□□□□ 0.14
TOP3B-209ENST00000442653 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
TOP3B-209ENST00000442653 CFTRP13569 1480 aa15.87■□□□□ 0.13
TOP3B-209ENST00000442653 TOP2AP11388 1531 aaKnown RBP15.86■□□□□ 0.13
TOP3B-209ENST00000442653 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
TOP3B-209ENST00000442653 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
TOP3B-209ENST00000442653 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
TOP3B-209ENST00000442653 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
TOP3B-209ENST00000442653 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
TOP3B-209ENST00000442653 ZNF608Q9ULD9 1512 aaPredicted RBP15.6■□□□□ 0.09
TOP3B-209ENST00000442653 TOPBP1Q92547 1522 aa15.58■□□□□ 0.09
TOP3B-209ENST00000442653 IFT140Q96RY7 1462 aa15.58■□□□□ 0.08
TOP3B-209ENST00000442653 DNMBPQ6XZF7 1577 aa15.5■□□□□ 0.07
TOP3B-209ENST00000442653 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
TOP3B-209ENST00000442653 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
TOP3B-209ENST00000442653 RIMBP3CA6NJZ7 1639 aa15.47■□□□□ 0.07
TOP3B-209ENST00000442653 RIMBP3BA6NNM3 1639 aa15.47■□□□□ 0.07
TOP3B-209ENST00000442653 RIMBP3Q9UFD9 1639 aa15.47■□□□□ 0.07
TOP3B-209ENST00000442653 TARBP1Q13395 1621 aaKnown RBP15.46■□□□□ 0.06
TOP3B-209ENST00000442653 PHF23Q9BUL5 403 aaPredicted RBP15.45■□□□□ 0.06
TOP3B-209ENST00000442653 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■■■□ 24.9
TOP3B-209ENST00000442653 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
TOP3B-209ENST00000442653 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-209ENST00000442653 CHD1O14646 1710 aa15.38■□□□□ 0.05
TOP3B-209ENST00000442653 RAD54L2Q9Y4B4 1467 aa15.38■□□□□ 0.05
TOP3B-209ENST00000442653 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
TOP3B-209ENST00000442653 SOGA1O94964 1423 aa15.33■□□□□ 0.04
TOP3B-209ENST00000442653 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
TOP3B-209ENST00000442653 FBLN2P98095 1184 aa15.31■□□□□ 0.04
TOP3B-209ENST00000442653 CUX1P39880 1505 aa15.3■□□□□ 0.04
TOP3B-209ENST00000442653 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
TOP3B-209ENST00000442653 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
TOP3B-209ENST00000442653 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
TOP3B-209ENST00000442653 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
TOP3B-209ENST00000442653 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
TOP3B-209ENST00000442653 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
TOP3B-209ENST00000442653 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
TOP3B-209ENST00000442653 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
TOP3B-209ENST00000442653 SYNJ2O15056 1496 aa15.17■□□□□ 0.02
TOP3B-209ENST00000442653 SYNJ1O43426 1573 aa15.16■□□□□ 0.02
TOP3B-209ENST00000442653 SUPT5HO00267 1087 aaKnown RBP15.15■□□□□ 0.02
TOP3B-209ENST00000442653 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
TOP3B-209ENST00000442653 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
TOP3B-209ENST00000442653 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
TOP3B-209ENST00000442653 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
TOP3B-209ENST00000442653 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
TOP3B-209ENST00000442653 ABCA5Q8WWZ7 1642 aa15.12■□□□□ 0.01
TOP3B-209ENST00000442653 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
TOP3B-209ENST00000442653 GRIN2AQ12879 1464 aa15.02■□□□□ -0
TOP3B-209ENST00000442653 TOP2BQ02880 1626 aa15.02□□□□□ -0.01
TOP3B-209ENST00000442653 BIVM-ERCC5R4GMW8 1640 aa15.02□□□□□ -0.01
TOP3B-209ENST00000442653 ADAMTS12P58397 1594 aa15.02□□□□□ -0.01
TOP3B-209ENST00000442653 ERCC6L2Q5T890 1561 aa15□□□□□ -0.01
TOP3B-209ENST00000442653 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
TOP3B-209ENST00000442653 NUP160Q12769 1436 aa14.98□□□□□ -0.01
TOP3B-209ENST00000442653 FHAD1B1AJZ9 1412 aa14.94□□□□□ -0.02
TOP3B-209ENST00000442653 ERICH3Q5RHP9 1530 aa14.92□□□□□ -0.02
TOP3B-209ENST00000442653 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms