RNA–Protein interactions for RNA: ENST00000534190.5

PPP6R3-225, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 2

Gene PPP6R3, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-225ENST00000534190 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
PPP6R3-225ENST00000534190 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
PPP6R3-225ENST00000534190 ABCC9O60706 1549 aa24.55■■□□□ 1.52
PPP6R3-225ENST00000534190 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
PPP6R3-225ENST00000534190 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
PPP6R3-225ENST00000534190 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
PPP6R3-225ENST00000534190 NACADO15069 1562 aa23.83■■□□□ 1.4
PPP6R3-225ENST00000534190 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
PPP6R3-225ENST00000534190 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
PPP6R3-225ENST00000534190 SCRIBQ14160 1630 aa23.39■■□□□ 1.34
PPP6R3-225ENST00000534190 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
PPP6R3-225ENST00000534190 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
PPP6R3-225ENST00000534190 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
PPP6R3-225ENST00000534190 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
PPP6R3-225ENST00000534190 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.21
PPP6R3-225ENST00000534190 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
PPP6R3-225ENST00000534190 EIF4G1Q04637 1599 aaKnown RBP22.39■■□□□ 1.17
PPP6R3-225ENST00000534190 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.17
PPP6R3-225ENST00000534190 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
PPP6R3-225ENST00000534190 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
PPP6R3-225ENST00000534190 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
PPP6R3-225ENST00000534190 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
PPP6R3-225ENST00000534190 WIZO95785 1651 aa22.18■■□□□ 1.14
PPP6R3-225ENST00000534190 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
PPP6R3-225ENST00000534190 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
PPP6R3-225ENST00000534190 PEG3Q9GZU2 1588 aa22.09■■□□□ 1.13
PPP6R3-225ENST00000534190 SMARCA2P51531 1590 aa22.08■■□□□ 1.13
PPP6R3-225ENST00000534190 PELP1Q8IZL8 1130 aaKnown RBP22.03■■□□□ 1.12
PPP6R3-225ENST00000534190 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
PPP6R3-225ENST00000534190 BAZ1BQ9UIG0 1483 aaKnown RBP21.98■■□□□ 1.11
PPP6R3-225ENST00000534190 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
PPP6R3-225ENST00000534190 TOP2AP11388 1531 aaKnown RBP21.91■■□□□ 1.1
PPP6R3-225ENST00000534190 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
PPP6R3-225ENST00000534190 MYT1Q01538 1121 aa21.51■■□□□ 1.03
PPP6R3-225ENST00000534190 HRCP23327 699 aa21.46■■□□□ 1.03
PPP6R3-225ENST00000534190 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
PPP6R3-225ENST00000534190 NESP48681 1621 aa21.41■■□□□ 1.02
PPP6R3-225ENST00000534190 CFTRP13569 1480 aa21.4■■□□□ 1.02
PPP6R3-225ENST00000534190 LAMC3Q9Y6N6 1575 aa21.33■■□□□ 1
PPP6R3-225ENST00000534190 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
PPP6R3-225ENST00000534190 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
PPP6R3-225ENST00000534190 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
PPP6R3-225ENST00000534190 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
PPP6R3-225ENST00000534190 ABCC8Q09428 1581 aa21.11■□□□□ 0.97
PPP6R3-225ENST00000534190 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
PPP6R3-225ENST00000534190 ERCC6Q03468 1493 aa21.09■□□□□ 0.97
PPP6R3-225ENST00000534190 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
PPP6R3-225ENST00000534190 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
PPP6R3-225ENST00000534190 CUX1P39880 1505 aa20.96■□□□□ 0.95
PPP6R3-225ENST00000534190 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
PPP6R3-225ENST00000534190 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
PPP6R3-225ENST00000534190 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
PPP6R3-225ENST00000534190 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
PPP6R3-225ENST00000534190 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
PPP6R3-225ENST00000534190 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
PPP6R3-225ENST00000534190 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
PPP6R3-225ENST00000534190 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
PPP6R3-225ENST00000534190 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
PPP6R3-225ENST00000534190 WDR62O43379 1518 aa20.84■□□□□ 0.93
PPP6R3-225ENST00000534190 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
PPP6R3-225ENST00000534190 POLA1P09884 1462 aaPredicted RBP20.77■□□□□ 0.92
PPP6R3-225ENST00000534190 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
PPP6R3-225ENST00000534190 SOGA1O94964 1423 aa20.71■□□□□ 0.91
PPP6R3-225ENST00000534190 CUX2O14529 1486 aa20.7■□□□□ 0.9
PPP6R3-225ENST00000534190 TARBP1Q13395 1621 aaKnown RBP20.62■□□□□ 0.89
PPP6R3-225ENST00000534190 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
PPP6R3-225ENST00000534190 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
PPP6R3-225ENST00000534190 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
PPP6R3-225ENST00000534190 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
PPP6R3-225ENST00000534190 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
PPP6R3-225ENST00000534190 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
PPP6R3-225ENST00000534190 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
PPP6R3-225ENST00000534190 WDR97A6NE52 1622 aa20.54■□□□□ 0.88
PPP6R3-225ENST00000534190 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
PPP6R3-225ENST00000534190 KIF27Q86VH2 1401 aa20.52■□□□□ 0.88
PPP6R3-225ENST00000534190 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.883e-7■■■■■ 28.1
PPP6R3-225ENST00000534190 TTBK1Q5TCY1 1321 aaPredicted RBP20.48■□□□□ 0.87
PPP6R3-225ENST00000534190 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
PPP6R3-225ENST00000534190 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
PPP6R3-225ENST00000534190 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
PPP6R3-225ENST00000534190 EEA1Q15075 1411 aa20.44■□□□□ 0.86
PPP6R3-225ENST00000534190 CSRNP3Q8WYN3 585 aa20.43■□□□□ 0.86
PPP6R3-225ENST00000534190 PCGF6Q9BYE7 350 aa20.43■□□□□ 0.86
PPP6R3-225ENST00000534190 IGF1RP08069 1367 aa20.41■□□□□ 0.86
PPP6R3-225ENST00000534190 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
PPP6R3-225ENST00000534190 PBRM1Q86U86 1689 aa20.36■□□□□ 0.85
PPP6R3-225ENST00000534190 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
PPP6R3-225ENST00000534190 ERICH3Q5RHP9 1530 aa20.34■□□□□ 0.85
PPP6R3-225ENST00000534190 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
PPP6R3-225ENST00000534190 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
PPP6R3-225ENST00000534190 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
PPP6R3-225ENST00000534190 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
PPP6R3-225ENST00000534190 CUL7Q14999 1698 aa20.24■□□□□ 0.83
PPP6R3-225ENST00000534190 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
PPP6R3-225ENST00000534190 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
PPP6R3-225ENST00000534190 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
PPP6R3-225ENST00000534190 FBLN2P98095 1184 aa20.22■□□□□ 0.83
PPP6R3-225ENST00000534190 RAPGEF2Q9Y4G8 1499 aa20.22■□□□□ 0.83
PPP6R3-225ENST00000534190 KIF21BO75037 1637 aa20.2■□□□□ 0.82
PPP6R3-225ENST00000534190 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms