RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.11
SPTBN2-201ENST00000309996 PELP1Q8IZL8 1130 aaKnown RBP20.8■□□□□ 0.92
SPTBN2-201ENST00000309996 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
SPTBN2-201ENST00000309996 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
SPTBN2-201ENST00000309996 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
SPTBN2-201ENST00000309996 APLP2Q06481 763 aa20.18■□□□□ 0.82
SPTBN2-201ENST00000309996 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
SPTBN2-201ENST00000309996 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
SPTBN2-201ENST00000309996 SHROOM4Q9ULL8 1493 aa19.82■□□□□ 0.76
SPTBN2-201ENST00000309996 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
SPTBN2-201ENST00000309996 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
SPTBN2-201ENST00000309996 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
SPTBN2-201ENST00000309996 RANGAP1P46060 587 aaPredicted RBP19.53■□□□□ 0.72
SPTBN2-201ENST00000309996 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
SPTBN2-201ENST00000309996 MYT1LQ9UL68 1186 aa19.42■□□□□ 0.7
SPTBN2-201ENST00000309996 NEFLP07196 543 aa19.35■□□□□ 0.69
SPTBN2-201ENST00000309996 MYT1Q01538 1121 aa19.27■□□□□ 0.68
SPTBN2-201ENST00000309996 DAXXQ9UER7 740 aaPredicted RBP19.24■□□□□ 0.67
SPTBN2-201ENST00000309996 ZEB1P37275 1124 aaPredicted RBP19.21■□□□□ 0.67
SPTBN2-201ENST00000309996 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
SPTBN2-201ENST00000309996 CHIC1Q5VXU3 224 aa19.19■□□□□ 0.66
SPTBN2-201ENST00000309996 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.64
SPTBN2-201ENST00000309996 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
SPTBN2-201ENST00000309996 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
SPTBN2-201ENST00000309996 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
SPTBN2-201ENST00000309996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
SPTBN2-201ENST00000309996 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
SPTBN2-201ENST00000309996 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
SPTBN2-201ENST00000309996 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
SPTBN2-201ENST00000309996 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
SPTBN2-201ENST00000309996 ZNF316A6NFI3 1004 aaPredicted RBP18.65■□□□□ 0.58
SPTBN2-201ENST00000309996 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
SPTBN2-201ENST00000309996 PPARGC1BQ86YN6 1023 aaKnown RBP18.53■□□□□ 0.56
SPTBN2-201ENST00000309996 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
SPTBN2-201ENST00000309996 ITGAEP38570 1179 aa18.49■□□□□ 0.55
SPTBN2-201ENST00000309996 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
SPTBN2-201ENST00000309996 BCANQ96GW7 911 aa18.38■□□□□ 0.53
SPTBN2-201ENST00000309996 BCL11AQ9H165 835 aa18.38■□□□□ 0.53
SPTBN2-201ENST00000309996 TRIM26Q12899 539 aaPredicted RBP18.31■□□□□ 0.52
SPTBN2-201ENST00000309996 HRCP23327 699 aa18.19■□□□□ 0.5
SPTBN2-201ENST00000309996 NEFMP07197 916 aa18.1■□□□□ 0.49
SPTBN2-201ENST00000309996 CANXP27824 592 aaKnown RBP18.05■□□□□ 0.48
SPTBN2-201ENST00000309996 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
SPTBN2-201ENST00000309996 TRIM52Q96A61 297 aa17.96■□□□□ 0.47
SPTBN2-201ENST00000309996 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
SPTBN2-201ENST00000309996 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
SPTBN2-201ENST00000309996 CDK11AQ9UQ88 783 aaPredicted RBP17.92■□□□□ 0.46
SPTBN2-201ENST00000309996 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
SPTBN2-201ENST00000309996 CDK11BP21127 795 aaKnown RBP17.9■□□□□ 0.46
SPTBN2-201ENST00000309996 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
SPTBN2-201ENST00000309996 A0A0G2JS52 829 aa17.87■□□□□ 0.45
SPTBN2-201ENST00000309996 FBLN2P98095 1184 aa17.84■□□□□ 0.45
SPTBN2-201ENST00000309996 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
SPTBN2-201ENST00000309996 SCAF1Q9H7N4 1312 aaKnown RBP17.82■□□□□ 0.44
SPTBN2-201ENST00000309996 ANP32CO43423 234 aa17.8■□□□□ 0.44
SPTBN2-201ENST00000309996 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
SPTBN2-201ENST00000309996 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
SPTBN2-201ENST00000309996 ANP32BQ92688 251 aaKnown RBP17.75■□□□□ 0.43
SPTBN2-201ENST00000309996 HSP90AA1P07900 732 aaKnown RBP17.72■□□□□ 0.43
SPTBN2-201ENST00000309996 ANP32AP39687 249 aaKnown RBP17.7■□□□□ 0.42
SPTBN2-201ENST00000309996 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
SPTBN2-201ENST00000309996 GTF3C3Q9Y5Q9 886 aa17.63■□□□□ 0.41
SPTBN2-201ENST00000309996 TULP1O00294 542 aaPredicted RBP17.62■□□□□ 0.41
SPTBN2-201ENST00000309996 NPM2Q86SE8 214 aaKnown RBP17.6■□□□□ 0.41
SPTBN2-201ENST00000309996 GLIPR1L2Q4G1C9 344 aa17.53■□□□□ 0.4
SPTBN2-201ENST00000309996 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
SPTBN2-201ENST00000309996 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SPTBN2-201ENST00000309996 UPF2Q9HAU5 1272 aaKnown RBP17.49■□□□□ 0.39
SPTBN2-201ENST00000309996 PLEKHG5O94827 1062 aa17.49■□□□□ 0.39
SPTBN2-201ENST00000309996 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
SPTBN2-201ENST00000309996 HAP1P54257 671 aaPredicted RBP17.4■□□□□ 0.38
SPTBN2-201ENST00000309996 ARID3CA6NKF2 412 aa17.39■□□□□ 0.37
SPTBN2-201ENST00000309996 NPM1P06748 294 aaKnown RBP eCLIP17.38■□□□□ 0.37
SPTBN2-201ENST00000309996 ZNF777Q9ULD5 760 aaPredicted RBP17.38■□□□□ 0.37
SPTBN2-201ENST00000309996 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
SPTBN2-201ENST00000309996 NPHP1O15259 732 aa17.35■□□□□ 0.37
SPTBN2-201ENST00000309996 ARXQ96QS3 562 aa17.35■□□□□ 0.37
SPTBN2-201ENST00000309996 FKBP8Q14318 412 aa17.22■□□□□ 0.35
SPTBN2-201ENST00000309996 NBR1Q14596 966 aa17.21■□□□□ 0.35
SPTBN2-201ENST00000309996 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
SPTBN2-201ENST00000309996 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.2■□□□□ 0.34
SPTBN2-201ENST00000309996 CLSTN1O94985 981 aa17.17■□□□□ 0.34
SPTBN2-201ENST00000309996 ACIN1Q9UKV3 1341 aaKnown RBP17.17■□□□□ 0.34
SPTBN2-201ENST00000309996 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
SPTBN2-201ENST00000309996 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
SPTBN2-201ENST00000309996 P3H3Q8IVL6 736 aa17.14■□□□□ 0.34
SPTBN2-201ENST00000309996 HNRNPUQ00839 825 aaKnown RBP eCLIP17.13■□□□□ 0.33
SPTBN2-201ENST00000309996 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
SPTBN2-201ENST00000309996 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
SPTBN2-201ENST00000309996 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
SPTBN2-201ENST00000309996 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPTBN2-201ENST00000309996 PRM3Q9NNZ6 103 aa17.1■□□□□ 0.33
SPTBN2-201ENST00000309996 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
SPTBN2-201ENST00000309996 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
SPTBN2-201ENST00000309996 NCLP19338 710 aaKnown RBP17.09■□□□□ 0.33
SPTBN2-201ENST00000309996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.33
SPTBN2-201ENST00000309996 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPTBN2-201ENST00000309996 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
SPTBN2-201ENST00000309996 TRIM44Q96DX7 344 aaPredicted RBP17.05■□□□□ 0.32
SPTBN2-201ENST00000309996 PPP1R15AO75807 674 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms