RNA–Protein interactions for RNA: ENST00000529997.5

SPTBN2-204, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

TSL 5 BASIC

Gene SPTBN2, Length 8,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-204ENST00000529997 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
SPTBN2-204ENST00000529997 PELP1Q8IZL8 1130 aaKnown RBP21.4■■□□□ 1.02
SPTBN2-204ENST00000529997 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
SPTBN2-204ENST00000529997 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
SPTBN2-204ENST00000529997 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
SPTBN2-204ENST00000529997 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
SPTBN2-204ENST00000529997 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
SPTBN2-204ENST00000529997 APLP2Q06481 763 aa20.34■□□□□ 0.85
SPTBN2-204ENST00000529997 MYT1Q01538 1121 aa20.3■□□□□ 0.84
SPTBN2-204ENST00000529997 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
SPTBN2-204ENST00000529997 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
SPTBN2-204ENST00000529997 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
SPTBN2-204ENST00000529997 PCGF6Q9BYE7 350 aa19.88■□□□□ 0.77
SPTBN2-204ENST00000529997 NEFLP07196 543 aa19.84■□□□□ 0.77
SPTBN2-204ENST00000529997 RANGAP1P46060 587 aaPredicted RBP19.8■□□□□ 0.76
SPTBN2-204ENST00000529997 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
SPTBN2-204ENST00000529997 DAXXQ9UER7 740 aaPredicted RBP19.76■□□□□ 0.75
SPTBN2-204ENST00000529997 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
SPTBN2-204ENST00000529997 ZEB1P37275 1124 aaPredicted RBP19.33■□□□□ 0.68
SPTBN2-204ENST00000529997 POLR3GLQ9BT43 218 aa19.31■□□□□ 0.68
SPTBN2-204ENST00000529997 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
SPTBN2-204ENST00000529997 MYT1LQ9UL68 1186 aa19.23■□□□□ 0.67
SPTBN2-204ENST00000529997 ZNF316A6NFI3 1004 aaPredicted RBP19.23■□□□□ 0.67
SPTBN2-204ENST00000529997 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
SPTBN2-204ENST00000529997 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
SPTBN2-204ENST00000529997 SLC4A1APQ9BWU0 796 aaKnown RBP19.15■□□□□ 0.66
SPTBN2-204ENST00000529997 CLSPNQ9HAW4 1339 aa19.1■□□□□ 0.65
SPTBN2-204ENST00000529997 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
SPTBN2-204ENST00000529997 RTL5Q5HYW3 569 aaPredicted RBP19.09■□□□□ 0.65
SPTBN2-204ENST00000529997 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
SPTBN2-204ENST00000529997 TRIM41Q8WV44 630 aa18.91■□□□□ 0.62
SPTBN2-204ENST00000529997 ITGAEP38570 1179 aa18.86■□□□□ 0.61
SPTBN2-204ENST00000529997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.82■□□□□ 0.6
SPTBN2-204ENST00000529997 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
SPTBN2-204ENST00000529997 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
SPTBN2-204ENST00000529997 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
SPTBN2-204ENST00000529997 ZBTB47Q9UFB7 747 aaPredicted RBP18.65■□□□□ 0.58
SPTBN2-204ENST00000529997 EIF5BO60841 1220 aaKnown RBP18.43■□□□□ 0.54
SPTBN2-204ENST00000529997 BCANQ96GW7 911 aa18.43■□□□□ 0.54
SPTBN2-204ENST00000529997 HRCP23327 699 aa18.41■□□□□ 0.54
SPTBN2-204ENST00000529997 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
SPTBN2-204ENST00000529997 CANXP27824 592 aaKnown RBP18.38■□□□□ 0.53
SPTBN2-204ENST00000529997 CDK11AQ9UQ88 783 aaPredicted RBP18.34■□□□□ 0.53
SPTBN2-204ENST00000529997 ANP32BQ92688 251 aaKnown RBP18.28■□□□□ 0.52
SPTBN2-204ENST00000529997 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
SPTBN2-204ENST00000529997 NPM2Q86SE8 214 aaKnown RBP18.19■□□□□ 0.5
SPTBN2-204ENST00000529997 HSP90AA1P07900 732 aaKnown RBP18.18■□□□□ 0.5
SPTBN2-204ENST00000529997 TRIM52Q96A61 297 aa18.17■□□□□ 0.5
SPTBN2-204ENST00000529997 GLIPR1L2Q4G1C9 344 aa18.16■□□□□ 0.5
SPTBN2-204ENST00000529997 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
SPTBN2-204ENST00000529997 ZNF326Q5BKZ1 582 aaKnown RBP18.16■□□□□ 0.5
SPTBN2-204ENST00000529997 NEFMP07197 916 aa18.15■□□□□ 0.5
SPTBN2-204ENST00000529997 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
SPTBN2-204ENST00000529997 ANP32AP39687 249 aaKnown RBP18.14■□□□□ 0.49
SPTBN2-204ENST00000529997 ANP32CO43423 234 aa18.06■□□□□ 0.48
SPTBN2-204ENST00000529997 ARXQ96QS3 562 aa18.05■□□□□ 0.48
SPTBN2-204ENST00000529997 CDK11BP21127 795 aaKnown RBP18.04■□□□□ 0.48
SPTBN2-204ENST00000529997 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
SPTBN2-204ENST00000529997 LOC105371045A0A1W2PR82 267 aa17.9■□□□□ 0.46
SPTBN2-204ENST00000529997 UPF2Q9HAU5 1272 aaKnown RBP17.88■□□□□ 0.45
SPTBN2-204ENST00000529997 NBR1Q14596 966 aa17.84■□□□□ 0.45
SPTBN2-204ENST00000529997 PLPPR3Q6T4P5 718 aa17.82■□□□□ 0.44
SPTBN2-204ENST00000529997 TULP1O00294 542 aaPredicted RBP17.81■□□□□ 0.44
SPTBN2-204ENST00000529997 ESF1Q9H501 851 aaKnown RBP17.77■□□□□ 0.43
SPTBN2-204ENST00000529997 A0A0G2JS52 829 aa17.73■□□□□ 0.43
SPTBN2-204ENST00000529997 FBLN2P98095 1184 aa17.71■□□□□ 0.43
SPTBN2-204ENST00000529997 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
SPTBN2-204ENST00000529997 SALL2Q9Y467 1007 aaPredicted RBP17.64■□□□□ 0.41
SPTBN2-204ENST00000529997 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
SPTBN2-204ENST00000529997 TNNT2P45379 298 aaPredicted RBP17.63■□□□□ 0.41
SPTBN2-204ENST00000529997 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
SPTBN2-204ENST00000529997 FKBP8Q14318 412 aa17.58■□□□□ 0.4
SPTBN2-204ENST00000529997 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
SPTBN2-204ENST00000529997 TRIM44Q96DX7 344 aaPredicted RBP17.57■□□□□ 0.4
SPTBN2-204ENST00000529997 CHGAP10645 457 aaKnown RBP17.52■□□□□ 0.4
SPTBN2-204ENST00000529997 ARID3CA6NKF2 412 aa17.51■□□□□ 0.39
SPTBN2-204ENST00000529997 DNTTIP2Q5QJE6 756 aaKnown RBP17.51■□□□□ 0.39
SPTBN2-204ENST00000529997 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
SPTBN2-204ENST00000529997 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
SPTBN2-204ENST00000529997 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
SPTBN2-204ENST00000529997 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
SPTBN2-204ENST00000529997 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.48■□□□□ 0.39
SPTBN2-204ENST00000529997 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
SPTBN2-204ENST00000529997 ZRSR1Q15695 479 aaKnown RBP17.47■□□□□ 0.39
SPTBN2-204ENST00000529997 ABCC9O60706 1549 aa17.46■□□□□ 0.39
SPTBN2-204ENST00000529997 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
SPTBN2-204ENST00000529997 ZNF777Q9ULD5 760 aaPredicted RBP17.44■□□□□ 0.38
SPTBN2-204ENST00000529997 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
SPTBN2-204ENST00000529997 CCDC136Q96JN2 1154 aa17.43■□□□□ 0.38
SPTBN2-204ENST00000529997 TAOK2Q9UL54 1235 aa17.43■□□□□ 0.38
SPTBN2-204ENST00000529997 ZBTB7CA1YPR0 619 aa17.43■□□□□ 0.38
SPTBN2-204ENST00000529997 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
SPTBN2-204ENST00000529997 ACIN1Q9UKV3 1341 aaKnown RBP17.36■□□□□ 0.37
SPTBN2-204ENST00000529997 WDR43Q15061 677 aaKnown RBP eCLIP17.33■□□□□ 0.36
SPTBN2-204ENST00000529997 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
SPTBN2-204ENST00000529997 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
SPTBN2-204ENST00000529997 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
SPTBN2-204ENST00000529997 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
SPTBN2-204ENST00000529997 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
SPTBN2-204ENST00000529997 BECN1Q14457 450 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms