RNA–Protein interactions for RNA: ENST00000373625.7

KPNA6-201, Transcript of karyopherin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA6, Length 7,378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA6-201ENST00000373625 DCAF8L2P0C7V8 631 aa13.72□□□□□ -0.21
KPNA6-201ENST00000373625 NISCHQ9Y2I1 1504 aa13.3□□□□□ -0.28
KPNA6-201ENST00000373625 SHROOM4Q9ULL8 1493 aa12.76□□□□□ -0.37
KPNA6-201ENST00000373625 SUPT5HO00267 1087 aaKnown RBP12.76□□□□□ -0.37
KPNA6-201ENST00000373625 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
KPNA6-201ENST00000373625 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
KPNA6-201ENST00000373625 APLP2Q06481 763 aa12.28□□□□□ -0.44
KPNA6-201ENST00000373625 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
KPNA6-201ENST00000373625 RANGAP1P46060 587 aaPredicted RBP12.02□□□□□ -0.48
KPNA6-201ENST00000373625 ATP1B4Q9UN42 357 aaPredicted RBP12.02□□□□□ -0.49
KPNA6-201ENST00000373625 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
KPNA6-201ENST00000373625 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
KPNA6-201ENST00000373625 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
KPNA6-201ENST00000373625 PCGF6Q9BYE7 350 aa11.73□□□□□ -0.53
KPNA6-201ENST00000373625 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
KPNA6-201ENST00000373625 CCER1Q8TC90 406 aaPredicted RBP11.67□□□□□ -0.54
KPNA6-201ENST00000373625 ABCC9O60706 1549 aa11.64□□□□□ -0.55
KPNA6-201ENST00000373625 ZEB1P37275 1124 aaPredicted RBP11.61□□□□□ -0.55
KPNA6-201ENST00000373625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.59□□□□□ -0.55
KPNA6-201ENST00000373625 HNRNPUL2Q1KMD3 747 aaKnown RBP11.59□□□□□ -0.55
KPNA6-201ENST00000373625 ERICH6Q7L0X2 663 aa11.55□□□□□ -0.56
KPNA6-201ENST00000373625 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
KPNA6-201ENST00000373625 PPARGC1BQ86YN6 1023 aaKnown RBP11.48□□□□□ -0.57
KPNA6-201ENST00000373625 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
KPNA6-201ENST00000373625 CHIC1Q5VXU3 224 aa11.44□□□□□ -0.58
KPNA6-201ENST00000373625 ITGAEP38570 1179 aa11.42□□□□□ -0.58
KPNA6-201ENST00000373625 NEFLP07196 543 aa11.38□□□□□ -0.59
KPNA6-201ENST00000373625 CCDC180Q9P1Z9 1646 aa11.38□□□□□ -0.59
KPNA6-201ENST00000373625 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
KPNA6-201ENST00000373625 POLR3GLQ9BT43 218 aa11.38□□□□□ -0.59
KPNA6-201ENST00000373625 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
KPNA6-201ENST00000373625 SLC4A1APQ9BWU0 796 aaKnown RBP11.32□□□□□ -0.6
KPNA6-201ENST00000373625 TRIM26Q12899 539 aaPredicted RBP11.3□□□□□ -0.6
KPNA6-201ENST00000373625 FAM50AQ14320 339 aaKnown RBP11.22□□□□□ -0.61
KPNA6-201ENST00000373625 FBLN2P98095 1184 aa11.21□□□□□ -0.61
KPNA6-201ENST00000373625 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
KPNA6-201ENST00000373625 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
KPNA6-201ENST00000373625 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
KPNA6-201ENST00000373625 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
KPNA6-201ENST00000373625 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
KPNA6-201ENST00000373625 BCANQ96GW7 911 aa11.05□□□□□ -0.64
KPNA6-201ENST00000373625 NEUROD1Q13562 356 aa11.02□□□□□ -0.64
KPNA6-201ENST00000373625 ZCCHC6Q5VYS8 1495 aaKnown RBP10.99□□□□□ -0.65
KPNA6-201ENST00000373625 ARID3CA6NKF2 412 aa10.96□□□□□ -0.65
KPNA6-201ENST00000373625 P3H3Q8IVL6 736 aa10.96□□□□□ -0.65
KPNA6-201ENST00000373625 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.66
KPNA6-201ENST00000373625 HRCP23327 699 aa10.95□□□□□ -0.66
KPNA6-201ENST00000373625 SLC24A1O60721 1099 aa10.93□□□□□ -0.66
KPNA6-201ENST00000373625 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
KPNA6-201ENST00000373625 MYO15BQ96JP2 1530 aa10.91□□□□□ -0.66
KPNA6-201ENST00000373625 CLSPNQ9HAW4 1339 aa10.91□□□□□ -0.66
KPNA6-201ENST00000373625 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
KPNA6-201ENST00000373625 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
KPNA6-201ENST00000373625 NACADO15069 1562 aa10.89□□□□□ -0.67
KPNA6-201ENST00000373625 PLPPR3Q6T4P5 718 aa10.89□□□□□ -0.67
KPNA6-201ENST00000373625 NPM1P06748 294 aaKnown RBP eCLIP10.87□□□□□ -0.67
KPNA6-201ENST00000373625 CDK11AQ9UQ88 783 aaPredicted RBP10.86□□□□□ -0.67
KPNA6-201ENST00000373625 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
KPNA6-201ENST00000373625 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
KPNA6-201ENST00000373625 ANP32CO43423 234 aa10.83□□□□□ -0.68
KPNA6-201ENST00000373625 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
KPNA6-201ENST00000373625 NEFMP07197 916 aa10.83□□□□□ -0.68
KPNA6-201ENST00000373625 CANXP27824 592 aaKnown RBP10.8□□□□□ -0.68
KPNA6-201ENST00000373625 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
KPNA6-201ENST00000373625 AEBP2Q6ZN18 517 aaPredicted RBP10.77□□□□□ -0.68
KPNA6-201ENST00000373625 CHGAP10645 457 aaKnown RBP10.77□□□□□ -0.69
KPNA6-201ENST00000373625 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
KPNA6-201ENST00000373625 CSRNP3Q8WYN3 585 aa10.77□□□□□ -0.69
KPNA6-201ENST00000373625 MYT1Q01538 1121 aa10.77□□□□□ -0.69
KPNA6-201ENST00000373625 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
KPNA6-201ENST00000373625 CHMP7Q8WUX9 453 aaPredicted RBP10.73□□□□□ -0.69
KPNA6-201ENST00000373625 BCL11AQ9H165 835 aa10.72□□□□□ -0.69
KPNA6-201ENST00000373625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.72e-6■■□□□ 13.3
KPNA6-201ENST00000373625 RTL5Q5HYW3 569 aaPredicted RBP10.68□□□□□ -0.7
KPNA6-201ENST00000373625 TONSLQ96HA7 1378 aa10.64□□□□□ -0.71
KPNA6-201ENST00000373625 SCAF1Q9H7N4 1312 aaKnown RBP10.64□□□□□ -0.71
KPNA6-201ENST00000373625 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
KPNA6-201ENST00000373625 MTUS2Q5JR59 1369 aa10.59□□□□□ -0.71
KPNA6-201ENST00000373625 CHIC2Q9UKJ5 165 aa10.59□□□□□ -0.71
KPNA6-201ENST00000373625 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
KPNA6-201ENST00000373625 GOLGA3Q08378 1498 aa10.57□□□□□ -0.72
KPNA6-201ENST00000373625 RSF1Q96T23 1441 aaPredicted RBP10.56□□□□□ -0.72
KPNA6-201ENST00000373625 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
KPNA6-201ENST00000373625 ZBTB7CA1YPR0 619 aa10.55□□□□□ -0.72
KPNA6-201ENST00000373625 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
KPNA6-201ENST00000373625 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
KPNA6-201ENST00000373625 ARID4BQ4LE39 1312 aaPredicted RBP10.55□□□□□ -0.72
KPNA6-201ENST00000373625 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
KPNA6-201ENST00000373625 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.72
KPNA6-201ENST00000373625 PPP1R15AO75807 674 aaPredicted RBP10.51□□□□□ -0.73
KPNA6-201ENST00000373625 SENP3Q9H4L4 574 aaPredicted RBP10.51□□□□□ -0.73
KPNA6-201ENST00000373625 A0A0G2JS52 829 aa10.5□□□□□ -0.73
KPNA6-201ENST00000373625 CLIP1P30622 1438 aa10.5□□□□□ -0.73
KPNA6-201ENST00000373625 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
KPNA6-201ENST00000373625 KIF27Q86VH2 1401 aa10.49□□□□□ -0.73
KPNA6-201ENST00000373625 WDR43Q15061 677 aaKnown RBP eCLIP10.49□□□□□ -0.73
KPNA6-201ENST00000373625 SMARCA2P51531 1590 aa10.49□□□□□ -0.73
KPNA6-201ENST00000373625 WRNQ14191 1432 aaPredicted RBP eCLIP10.48□□□□□ -0.73
KPNA6-201ENST00000373625 PLEKHD1A6NEE1 506 aa10.47□□□□□ -0.73
KPNA6-201ENST00000373625 PLEKHG5O94827 1062 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms