RNA–Protein interactions for RNA: ENST00000265636.9

PPP6R3-201, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PPP6R3, Length 4,794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-201ENST00000265636 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
PPP6R3-201ENST00000265636 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.48
PPP6R3-201ENST00000265636 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
PPP6R3-201ENST00000265636 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
PPP6R3-201ENST00000265636 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
PPP6R3-201ENST00000265636 FAM9AQ8IZU1 332 aaPredicted RBP16.95■□□□□ 0.3
PPP6R3-201ENST00000265636 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
PPP6R3-201ENST00000265636 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
PPP6R3-201ENST00000265636 APLP2Q06481 763 aa16.77■□□□□ 0.28
PPP6R3-201ENST00000265636 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
PPP6R3-201ENST00000265636 TRIM41Q8WV44 630 aa16.59■□□□□ 0.25
PPP6R3-201ENST00000265636 RANGAP1P46060 587 aaPredicted RBP16.52■□□□□ 0.23
PPP6R3-201ENST00000265636 CCER1Q8TC90 406 aaPredicted RBP16.46■□□□□ 0.22
PPP6R3-201ENST00000265636 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
PPP6R3-201ENST00000265636 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
PPP6R3-201ENST00000265636 UBTFP17480 764 aaKnown RBP16.33■□□□□ 0.2
PPP6R3-201ENST00000265636 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
PPP6R3-201ENST00000265636 ATP1B4Q9UN42 357 aaPredicted RBP16.24■□□□□ 0.19
PPP6R3-201ENST00000265636 LOC105371045A0A1W2PR82 267 aa16.15■□□□□ 0.18
PPP6R3-201ENST00000265636 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
PPP6R3-201ENST00000265636 YTHDC1Q96MU7 727 aaKnown RBP16.14■□□□□ 0.17
PPP6R3-201ENST00000265636 CHIC1Q5VXU3 224 aa16.12■□□□□ 0.17
PPP6R3-201ENST00000265636 HRCP23327 699 aa16.11■□□□□ 0.17
PPP6R3-201ENST00000265636 ERICH6Q7L0X2 663 aa15.98■□□□□ 0.15
PPP6R3-201ENST00000265636 NEFLP07196 543 aa15.89■□□□□ 0.13
PPP6R3-201ENST00000265636 ITGAEP38570 1179 aa15.86■□□□□ 0.13
PPP6R3-201ENST00000265636 HNRNPUL2Q1KMD3 747 aaKnown RBP15.83■□□□□ 0.12
PPP6R3-201ENST00000265636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.75■□□□□ 0.11
PPP6R3-201ENST00000265636 DIEXFQ68CQ4 756 aaKnown RBP15.6■□□□□ 0.09
PPP6R3-201ENST00000265636 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
PPP6R3-201ENST00000265636 MYT1Q01538 1121 aa15.59■□□□□ 0.09
PPP6R3-201ENST00000265636 CNGB1Q14028 1251 aaPredicted RBP15.56■□□□□ 0.08
PPP6R3-201ENST00000265636 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
PPP6R3-201ENST00000265636 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
PPP6R3-201ENST00000265636 ABCC9O60706 1549 aa15.42■□□□□ 0.06
PPP6R3-201ENST00000265636 FAM50AQ14320 339 aaKnown RBP15.4■□□□□ 0.06
PPP6R3-201ENST00000265636 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
PPP6R3-201ENST00000265636 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
PPP6R3-201ENST00000265636 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
PPP6R3-201ENST00000265636 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
PPP6R3-201ENST00000265636 BCANQ96GW7 911 aa15.24■□□□□ 0.03
PPP6R3-201ENST00000265636 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
PPP6R3-201ENST00000265636 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
PPP6R3-201ENST00000265636 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
PPP6R3-201ENST00000265636 ANP32CO43423 234 aa15.13■□□□□ 0.01
PPP6R3-201ENST00000265636 ACIN1Q9UKV3 1341 aaKnown RBP15.12■□□□□ 0.01
PPP6R3-201ENST00000265636 ZNF326Q5BKZ1 582 aaKnown RBP15.12■□□□□ 0.01
PPP6R3-201ENST00000265636 P3H3Q8IVL6 736 aa15.11■□□□□ 0.01
PPP6R3-201ENST00000265636 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0.01
PPP6R3-201ENST00000265636 RTL5Q5HYW3 569 aaPredicted RBP15.06■□□□□ 0
PPP6R3-201ENST00000265636 ARID3CA6NKF2 412 aa15.02□□□□□ -0.01
PPP6R3-201ENST00000265636 FBLN2P98095 1184 aa15□□□□□ -0.01
PPP6R3-201ENST00000265636 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
PPP6R3-201ENST00000265636 CDK11AQ9UQ88 783 aaPredicted RBP14.97□□□□□ -0.01
PPP6R3-201ENST00000265636 DCAF1Q9Y4B6 1507 aa14.97□□□□□ -0.01
PPP6R3-201ENST00000265636 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
PPP6R3-201ENST00000265636 ZNF777Q9ULD5 760 aaPredicted RBP14.85□□□□□ -0.03
PPP6R3-201ENST00000265636 DDX10Q13206 875 aaKnown RBP14.84□□□□□ -0.03
PPP6R3-201ENST00000265636 FKBP8Q14318 412 aa14.82□□□□□ -0.04
PPP6R3-201ENST00000265636 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
PPP6R3-201ENST00000265636 TONSLQ96HA7 1378 aa14.78□□□□□ -0.04
PPP6R3-201ENST00000265636 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
PPP6R3-201ENST00000265636 BCL11AQ9H165 835 aa14.74□□□□□ -0.05
PPP6R3-201ENST00000265636 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
PPP6R3-201ENST00000265636 MIER1Q8N108 512 aa14.74□□□□□ -0.05
PPP6R3-201ENST00000265636 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
PPP6R3-201ENST00000265636 FAM9BQ8IZU0 186 aa14.72□□□□□ -0.05
PPP6R3-201ENST00000265636 CHIC2Q9UKJ5 165 aa14.72□□□□□ -0.05
PPP6R3-201ENST00000265636 NPM2Q86SE8 214 aaKnown RBP14.69□□□□□ -0.06
PPP6R3-201ENST00000265636 ANP32AP39687 249 aaKnown RBP14.69□□□□□ -0.06
PPP6R3-201ENST00000265636 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
PPP6R3-201ENST00000265636 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
PPP6R3-201ENST00000265636 SALL2Q9Y467 1007 aaPredicted RBP14.65□□□□□ -0.06
PPP6R3-201ENST00000265636 CLIP1P30622 1438 aa14.64□□□□□ -0.07
PPP6R3-201ENST00000265636 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
PPP6R3-201ENST00000265636 SLC24A1O60721 1099 aa14.61□□□□□ -0.07
PPP6R3-201ENST00000265636 NEFMP07197 916 aa14.59□□□□□ -0.07
PPP6R3-201ENST00000265636 CEP162Q5TB80 1403 aa14.57□□□□□ -0.08
PPP6R3-201ENST00000265636 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
PPP6R3-201ENST00000265636 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
PPP6R3-201ENST00000265636 MRS2Q9HD23 443 aa14.56□□□□□ -0.08
PPP6R3-201ENST00000265636 CHGAP10645 457 aaKnown RBP14.56□□□□□ -0.08
PPP6R3-201ENST00000265636 MTUS2Q5JR59 1369 aa14.55□□□□□ -0.08
PPP6R3-201ENST00000265636 CCDC180Q9P1Z9 1646 aa14.55□□□□□ -0.08
PPP6R3-201ENST00000265636 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
PPP6R3-201ENST00000265636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.53□□□□□ -0.081e-6■■□□□ 14
PPP6R3-201ENST00000265636 CCDC136Q96JN2 1154 aa14.53□□□□□ -0.08
PPP6R3-201ENST00000265636 RRP7BPQ9NSQ0 103 aa14.51□□□□□ -0.09
PPP6R3-201ENST00000265636 TSPY4P0CV99 314 aa14.48□□□□□ -0.09
PPP6R3-201ENST00000265636 TSPY10P0CW01 314 aa14.48□□□□□ -0.09
PPP6R3-201ENST00000265636 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
PPP6R3-201ENST00000265636 EIF4G2P78344 907 aaKnown RBP eCLIP14.46□□□□□ -0.09
PPP6R3-201ENST00000265636 EEA1Q15075 1411 aa14.46□□□□□ -0.1
PPP6R3-201ENST00000265636 NBR1Q14596 966 aa14.45□□□□□ -0.1
PPP6R3-201ENST00000265636 WRNQ14191 1432 aaPredicted RBP eCLIP14.44□□□□□ -0.1
PPP6R3-201ENST00000265636 TNIKQ9UKE5 1360 aa14.42□□□□□ -0.1
PPP6R3-201ENST00000265636 SENP3-EIF4A1A0A087X0R7 540 aa14.41□□□□□ -0.1
PPP6R3-201ENST00000265636 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
PPP6R3-201ENST00000265636 WDR43Q15061 677 aaKnown RBP eCLIP14.39□□□□□ -0.11
PPP6R3-201ENST00000265636 HSP90AA1P07900 732 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms