RNA–Protein interactions for RNA: ENST00000611817.4

SPTBN2-210, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

TSL 2 BASIC

Gene SPTBN2, Length 2,890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-210ENST00000611817 NISCHQ9Y2I1 1504 aa28.35■■■□□ 2.13
SPTBN2-210ENST00000611817 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
SPTBN2-210ENST00000611817 ZCCHC6Q5VYS8 1495 aaKnown RBP23.89■■□□□ 1.42
SPTBN2-210ENST00000611817 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
SPTBN2-210ENST00000611817 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.35
SPTBN2-210ENST00000611817 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
SPTBN2-210ENST00000611817 MYO15BQ96JP2 1530 aa23.16■■□□□ 1.3
SPTBN2-210ENST00000611817 NACADO15069 1562 aa22.85■■□□□ 1.25
SPTBN2-210ENST00000611817 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
SPTBN2-210ENST00000611817 ABCC9O60706 1549 aa22.81■■□□□ 1.24
SPTBN2-210ENST00000611817 HRCP23327 699 aa22.57■■□□□ 1.2
SPTBN2-210ENST00000611817 SCRIBQ14160 1630 aa22.57■■□□□ 1.2
SPTBN2-210ENST00000611817 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
SPTBN2-210ENST00000611817 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
SPTBN2-210ENST00000611817 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
SPTBN2-210ENST00000611817 PPARGC1BQ86YN6 1023 aaKnown RBP22.07■■□□□ 1.12
SPTBN2-210ENST00000611817 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
SPTBN2-210ENST00000611817 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
SPTBN2-210ENST00000611817 PELP1Q8IZL8 1130 aaKnown RBP21.93■■□□□ 1.1
SPTBN2-210ENST00000611817 CECR2Q9BXF3 1484 aa21.92■■□□□ 1.1
SPTBN2-210ENST00000611817 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.09
SPTBN2-210ENST00000611817 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
SPTBN2-210ENST00000611817 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
SPTBN2-210ENST00000611817 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
SPTBN2-210ENST00000611817 WIZO95785 1651 aa21.72■■□□□ 1.07
SPTBN2-210ENST00000611817 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
SPTBN2-210ENST00000611817 PABPN1Q86U42 306 aaKnown RBP eCLIP21.52■■□□□ 1.04
SPTBN2-210ENST00000611817 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
SPTBN2-210ENST00000611817 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
SPTBN2-210ENST00000611817 SMARCA2P51531 1590 aa21.35■■□□□ 1.01
SPTBN2-210ENST00000611817 EIF4G1Q04637 1599 aaKnown RBP21.34■■□□□ 1.01
SPTBN2-210ENST00000611817 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
SPTBN2-210ENST00000611817 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
SPTBN2-210ENST00000611817 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
SPTBN2-210ENST00000611817 TRIM41Q8WV44 630 aa21.27■■□□□ 1
SPTBN2-210ENST00000611817 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
SPTBN2-210ENST00000611817 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
SPTBN2-210ENST00000611817 BAZ1BQ9UIG0 1483 aaKnown RBP21.15■□□□□ 0.98
SPTBN2-210ENST00000611817 MYT1Q01538 1121 aa21.11■□□□□ 0.97
SPTBN2-210ENST00000611817 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
SPTBN2-210ENST00000611817 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
SPTBN2-210ENST00000611817 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
SPTBN2-210ENST00000611817 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
SPTBN2-210ENST00000611817 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
SPTBN2-210ENST00000611817 ACIN1Q9UKV3 1341 aaKnown RBP20.85■□□□□ 0.93
SPTBN2-210ENST00000611817 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.929e-6■■■■■ 50.1
SPTBN2-210ENST00000611817 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
SPTBN2-210ENST00000611817 EEA1Q15075 1411 aa20.75■□□□□ 0.91
SPTBN2-210ENST00000611817 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
SPTBN2-210ENST00000611817 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
SPTBN2-210ENST00000611817 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
SPTBN2-210ENST00000611817 GTF3C3Q9Y5Q9 886 aa20.68■□□□□ 0.9
SPTBN2-210ENST00000611817 CFTRP13569 1480 aa20.67■□□□□ 0.9
SPTBN2-210ENST00000611817 TOP2BQ02880 1626 aa20.63■□□□□ 0.89
SPTBN2-210ENST00000611817 BIVM-ERCC5R4GMW8 1640 aa20.63■□□□□ 0.89
SPTBN2-210ENST00000611817 SOGA1O94964 1423 aa20.59■□□□□ 0.89
SPTBN2-210ENST00000611817 CENPBP07199 599 aaPredicted RBP20.57■□□□□ 0.88
SPTBN2-210ENST00000611817 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
SPTBN2-210ENST00000611817 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
SPTBN2-210ENST00000611817 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
SPTBN2-210ENST00000611817 KIF21BO75037 1637 aa20.45■□□□□ 0.86
SPTBN2-210ENST00000611817 CUX1P39880 1505 aa20.44■□□□□ 0.86
SPTBN2-210ENST00000611817 DIEXFQ68CQ4 756 aaKnown RBP20.44■□□□□ 0.86
SPTBN2-210ENST00000611817 TNIKQ9UKE5 1360 aa20.43■□□□□ 0.86
SPTBN2-210ENST00000611817 GOLGA3Q08378 1498 aa20.41■□□□□ 0.86
SPTBN2-210ENST00000611817 CEP164Q9UPV0 1460 aa20.39■□□□□ 0.85
SPTBN2-210ENST00000611817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.38■□□□□ 0.85
SPTBN2-210ENST00000611817 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
SPTBN2-210ENST00000611817 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
SPTBN2-210ENST00000611817 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
SPTBN2-210ENST00000611817 CEP162Q5TB80 1403 aa20.3■□□□□ 0.84
SPTBN2-210ENST00000611817 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
SPTBN2-210ENST00000611817 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
SPTBN2-210ENST00000611817 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
SPTBN2-210ENST00000611817 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
SPTBN2-210ENST00000611817 DNMBPQ6XZF7 1577 aa20.2■□□□□ 0.82
SPTBN2-210ENST00000611817 TTBK1Q5TCY1 1321 aaPredicted RBP20.17■□□□□ 0.82
SPTBN2-210ENST00000611817 RAPGEF2Q9Y4G8 1499 aa20.17■□□□□ 0.82
SPTBN2-210ENST00000611817 FGD5Q6ZNL6 1462 aa20.15■□□□□ 0.82
SPTBN2-210ENST00000611817 NESP48681 1621 aa20.14■□□□□ 0.81
SPTBN2-210ENST00000611817 YTHDC1Q96MU7 727 aaKnown RBP20.1■□□□□ 0.81
SPTBN2-210ENST00000611817 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
SPTBN2-210ENST00000611817 PDS5BQ9NTI5 1447 aa20.09■□□□□ 0.81
SPTBN2-210ENST00000611817 CUX2O14529 1486 aa20.06■□□□□ 0.8
SPTBN2-210ENST00000611817 CLIP1P30622 1438 aa20.06■□□□□ 0.8
SPTBN2-210ENST00000611817 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
SPTBN2-210ENST00000611817 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
SPTBN2-210ENST00000611817 ZNF316A6NFI3 1004 aaPredicted RBP20.02■□□□□ 0.8
SPTBN2-210ENST00000611817 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
SPTBN2-210ENST00000611817 IGF1RP08069 1367 aa20.01■□□□□ 0.79
SPTBN2-210ENST00000611817 URB2Q14146 1524 aaKnown RBP19.99■□□□□ 0.79
SPTBN2-210ENST00000611817 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
SPTBN2-210ENST00000611817 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
SPTBN2-210ENST00000611817 VPS8Q8N3P4 1428 aa19.97■□□□□ 0.79
SPTBN2-210ENST00000611817 DNAJC5BQ9UF47 199 aa19.94■□□□□ 0.78
SPTBN2-210ENST00000611817 CUL7Q14999 1698 aa19.91■□□□□ 0.78
SPTBN2-210ENST00000611817 CARMIL1Q5VZK9 1371 aa19.91■□□□□ 0.78
SPTBN2-210ENST00000611817 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
SPTBN2-210ENST00000611817 MIER1Q8N108 512 aa19.89■□□□□ 0.78
SPTBN2-210ENST00000611817 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms