RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 CHIC1Q5VXU3 224 aa10.1□□□□□ -0.79
CCNL1-214ENST00000471247 AEBP2Q6ZN18 517 aaPredicted RBP10.02□□□□□ -0.8
CCNL1-214ENST00000471247 PHF23Q9BUL5 403 aaPredicted RBP8.85□□□□□ -0.99
CCNL1-214ENST00000471247 SENP3Q9H4L4 574 aaPredicted RBP8.51□□□□□ -1.05
CCNL1-214ENST00000471247 PLPPR3Q6T4P5 718 aa8.21□□□□□ -1.1
CCNL1-214ENST00000471247 FOXD1Q16676 465 aa7.81□□□□□ -1.16
CCNL1-214ENST00000471247 PPP6R1Q9UPN7 881 aa7.59□□□□□ -1.19
CCNL1-214ENST00000471247 ADRA2BP18089 450 aa7.5□□□□□ -1.21
CCNL1-214ENST00000471247 DNAJC5BQ9UF47 199 aa7.41□□□□□ -1.22
CCNL1-214ENST00000471247 PIAS4Q8N2W9 510 aaPredicted RBP7.23□□□□□ -1.25
CCNL1-214ENST00000471247 MSH5O43196 834 aa7.23□□□□□ -1.25
CCNL1-214ENST00000471247 PPP4R3CPQ6ZMV5 832 aa7.2□□□□□ -1.26
CCNL1-214ENST00000471247 KCNA4P22459 653 aa7.15□□□□□ -1.27
CCNL1-214ENST00000471247 NCBP3Q53F19 620 aaKnown RBP7.11□□□□□ -1.27
CCNL1-214ENST00000471247 CNKSR2Q8WXI2 1034 aa7.06□□□□□ -1.28
CCNL1-214ENST00000471247 SCAF1Q9H7N4 1312 aaKnown RBP7.03□□□□□ -1.28
CCNL1-214ENST00000471247 NPM3O75607 178 aaKnown RBP6.98□□□□□ -1.29
CCNL1-214ENST00000471247 RNF216Q9NWF9 866 aaPredicted RBP6.95□□□□□ -1.3
CCNL1-214ENST00000471247 HOXD11P31277 338 aaPredicted RBP6.94□□□□□ -1.3
CCNL1-214ENST00000471247 DMRT2Q9Y5R5 561 aa6.92□□□□□ -1.3
CCNL1-214ENST00000471247 SLC4A1APQ9BWU0 796 aaKnown RBP6.84□□□□□ -1.31
CCNL1-214ENST00000471247 CSRNP3Q8WYN3 585 aa6.79□□□□□ -1.32
CCNL1-214ENST00000471247 MAPK8IP2Q13387 824 aaPredicted RBP6.72□□□□□ -1.33
CCNL1-214ENST00000471247 ZBTB22O15209 634 aa6.68□□□□□ -1.34
CCNL1-214ENST00000471247 ATXN8OSP0DMR3 200 aa6.67□□□□□ -1.34
CCNL1-214ENST00000471247 FOXD4L1Q9NU39 408 aa6.65□□□□□ -1.34
CCNL1-214ENST00000471247 NISCHQ9Y2I1 1504 aa6.65□□□□□ -1.35
CCNL1-214ENST00000471247 SLC4A2P04920 1241 aa6.6□□□□□ -1.35
CCNL1-214ENST00000471247 EHMT2Q96KQ7 1210 aa6.53□□□□□ -1.36
CCNL1-214ENST00000471247 MYCNP04198 464 aaPredicted RBP6.5□□□□□ -1.37
CCNL1-214ENST00000471247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.36□□□□□ -1.39
CCNL1-214ENST00000471247 HNRNPUL2Q1KMD3 747 aaKnown RBP6.36□□□□□ -1.39
CCNL1-214ENST00000471247 SAMD1Q6SPF0 538 aaPredicted RBP6.32□□□□□ -1.4
CCNL1-214ENST00000471247 U3KPZ7 1027 aaPredicted RBP6.31□□□□□ -1.4
CCNL1-214ENST00000471247 APLP2Q06481 763 aa6.28□□□□□ -1.4
CCNL1-214ENST00000471247 PROM2Q8N271 834 aa6.24□□□□□ -1.41
CCNL1-214ENST00000471247 RNF39Q9H2S5 420 aa6.22□□□□□ -1.41
CCNL1-214ENST00000471247 ATF5Q9Y2D1 282 aaPredicted RBP6.19□□□□□ -1.42
CCNL1-214ENST00000471247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.17□□□□□ -1.427e-8■■■□□ 15.2
CCNL1-214ENST00000471247 C1QBPQ07021 282 aaKnown RBP6.17□□□□□ -1.42
CCNL1-214ENST00000471247 CCDC180Q9P1Z9 1646 aa6.15□□□□□ -1.43
CCNL1-214ENST00000471247 ZNF219Q9P2Y4 722 aaPredicted RBP6.13□□□□□ -1.43
CCNL1-214ENST00000471247 POTEDQ86YR6 584 aa6.1□□□□□ -1.43
CCNL1-214ENST00000471247 DCAF8L1A6NGE4 600 aa6.03□□□□□ -1.44
CCNL1-214ENST00000471247 MKRN4PQ13434 485 aaPredicted RBP6.03□□□□□ -1.44
CCNL1-214ENST00000471247 ZBTB12Q9Y330 459 aaPredicted RBP6.02□□□□□ -1.45
CCNL1-214ENST00000471247 AMER1Q5JTC6 1135 aaPredicted RBP5.96□□□□□ -1.46
CCNL1-214ENST00000471247 DSG3P32926 999 aa5.92□□□□□ -1.46
CCNL1-214ENST00000471247 FKBP8Q14318 412 aa5.91□□□□□ -1.46
CCNL1-214ENST00000471247 SSUH2Q9Y2M2 353 aa5.91□□□□□ -1.46
CCNL1-214ENST00000471247 FBLN2P98095 1184 aa5.9□□□□□ -1.47
CCNL1-214ENST00000471247 SPINK5Q9NQ38 1064 aaPredicted RBP5.9□□□□□ -1.47
CCNL1-214ENST00000471247 FBXO3Q9UK99 471 aa5.87□□□□□ -1.47
CCNL1-214ENST00000471247 SPDYE4A6NLX3 237 aa5.86□□□□□ -1.47
CCNL1-214ENST00000471247 DCAF1Q9Y4B6 1507 aa5.84□□□□□ -1.48
CCNL1-214ENST00000471247 SPDYE2BA6NHP3 402 aa5.83□□□□□ -1.48
CCNL1-214ENST00000471247 SPDYE6P0CI01 402 aa5.83□□□□□ -1.48
CCNL1-214ENST00000471247 POLA2Q14181 598 aa5.83□□□□□ -1.48
CCNL1-214ENST00000471247 SPDYE2Q495Y8 402 aa5.83□□□□□ -1.48
CCNL1-214ENST00000471247 STAG3Q9UJ98 1225 aa5.8□□□□□ -1.48
CCNL1-214ENST00000471247 MYO15BQ96JP2 1530 aa5.79□□□□□ -1.48
CCNL1-214ENST00000471247 CAPN15O75808 1086 aa5.75□□□□□ -1.49
CCNL1-214ENST00000471247 DNAJC5Q9H3Z4 198 aa5.75□□□□□ -1.49
CCNL1-214ENST00000471247 RTN4Q9NQC3 1192 aaKnown RBP5.73□□□□□ -1.49
CCNL1-214ENST00000471247 VASPP50552 380 aaPredicted RBP5.72□□□□□ -1.49
CCNL1-214ENST00000471247 UNC13AQ9UPW8 1703 aa5.72□□□□□ -1.49
CCNL1-214ENST00000471247 ZCCHC6Q5VYS8 1495 aaKnown RBP5.72□□□□□ -1.49
CCNL1-214ENST00000471247 TRHP20396 242 aaPredicted RBP5.71□□□□□ -1.49
CCNL1-214ENST00000471247 IFNLR1Q8IU57 520 aaPredicted RBP5.68□□□□□ -1.5
CCNL1-214ENST00000471247 AKT1S1Q96B36 256 aa5.67□□□□□ -1.5
CCNL1-214ENST00000471247 TRIM41Q8WV44 630 aa5.63□□□□□ -1.51
CCNL1-214ENST00000471247 CHRM1P11229 460 aaPredicted RBP5.62□□□□□ -1.51
CCNL1-214ENST00000471247 SGIP1Q9BQI5 828 aa5.62□□□□□ -1.51
CCNL1-214ENST00000471247 ZNF692Q9BU19 519 aaPredicted RBP5.61□□□□□ -1.51
CCNL1-214ENST00000471247 PKD2Q13563 968 aa5.61□□□□□ -1.51
CCNL1-214ENST00000471247 RBM42Q9BTD8 480 aaKnown RBP5.61□□□□□ -1.51
CCNL1-214ENST00000471247 ABCB7O75027 752 aa5.6□□□□□ -1.51
CCNL1-214ENST00000471247 OSCARQ8IYS5 282 aa5.6□□□□□ -1.51
CCNL1-214ENST00000471247 SPOCK2Q92563 424 aa5.59□□□□□ -1.51
CCNL1-214ENST00000471247 MNX1P50219 401 aaPredicted RBP5.59□□□□□ -1.51
CCNL1-214ENST00000471247 CACNB1Q02641 598 aaPredicted RBP5.59□□□□□ -1.51
CCNL1-214ENST00000471247 ZBTB47Q9UFB7 747 aaPredicted RBP5.57□□□□□ -1.52
CCNL1-214ENST00000471247 PABPN1Q86U42 306 aaKnown RBP eCLIP5.54□□□□□ -1.528e-6■□□□□ 8.9
CCNL1-214ENST00000471247 NUBP1P53384 320 aa5.54□□□□□ -1.52
CCNL1-214ENST00000471247 CREBZFQ9NS37 354 aa5.54□□□□□ -1.52
CCNL1-214ENST00000471247 EIF4G1Q04637 1599 aaKnown RBP5.53□□□□□ -1.52
CCNL1-214ENST00000471247 SLC24A1O60721 1099 aa5.52□□□□□ -1.53
CCNL1-214ENST00000471247 SPDYE1Q8NFV5 336 aaPredicted RBP5.52□□□□□ -1.53
CCNL1-214ENST00000471247 REM2Q8IYK8 340 aaPredicted RBP5.5□□□□□ -1.53
CCNL1-214ENST00000471247 BBXQ8WY36 941 aaPredicted RBP5.49□□□□□ -1.53
CCNL1-214ENST00000471247 GSE1Q14687 1217 aa5.47□□□□□ -1.53
CCNL1-214ENST00000471247 FXR2P51116 673 aaKnown RBP eCLIP5.46□□□□□ -1.54
CCNL1-214ENST00000471247 PLCB2Q00722 1185 aa5.45□□□□□ -1.54
CCNL1-214ENST00000471247 HS6ST3Q8IZP7 471 aa5.44□□□□□ -1.54
CCNL1-214ENST00000471247 BICRAQ9NZM4 1560 aa5.43□□□□□ -1.54
CCNL1-214ENST00000471247 PEG3Q9GZU2 1588 aa5.43□□□□□ -1.54
CCNL1-214ENST00000471247 ABCC9O60706 1549 aa5.43□□□□□ -1.54
CCNL1-214ENST00000471247 VSIG10Q8N0Z9 540 aa5.41□□□□□ -1.54
CCNL1-214ENST00000471247 NACADO15069 1562 aa5.4□□□□□ -1.55
CCNL1-214ENST00000471247 PITPNM1O00562 1244 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms