RNA–Protein interactions for RNA: ENST00000483789.5

CCNL1-224, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 667 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-224ENST00000483789 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
CCNL1-224ENST00000483789 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
CCNL1-224ENST00000483789 SENP3Q9H4L4 574 aaPredicted RBP21.1■□□□□ 0.97
CCNL1-224ENST00000483789 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
CCNL1-224ENST00000483789 FOXD1Q16676 465 aa19.56■□□□□ 0.72
CCNL1-224ENST00000483789 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
CCNL1-224ENST00000483789 MSH5O43196 834 aa18.43■□□□□ 0.54
CCNL1-224ENST00000483789 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
CCNL1-224ENST00000483789 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
CCNL1-224ENST00000483789 ADRA2BP18089 450 aa18.21■□□□□ 0.51
CCNL1-224ENST00000483789 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
CCNL1-224ENST00000483789 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
CCNL1-224ENST00000483789 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
CCNL1-224ENST00000483789 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
CCNL1-224ENST00000483789 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
CCNL1-224ENST00000483789 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
CCNL1-224ENST00000483789 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
CCNL1-224ENST00000483789 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
CCNL1-224ENST00000483789 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
CCNL1-224ENST00000483789 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
CCNL1-224ENST00000483789 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
CCNL1-224ENST00000483789 RNF39Q9H2S5 420 aa15.66■□□□□ 0.1
CCNL1-224ENST00000483789 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
CCNL1-224ENST00000483789 NPM3O75607 178 aaKnown RBP15.51■□□□□ 0.07
CCNL1-224ENST00000483789 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
CCNL1-224ENST00000483789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.051e-7■■□□□ 13.9
CCNL1-224ENST00000483789 KCNA4P22459 653 aa15.18■□□□□ 0.02
CCNL1-224ENST00000483789 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
CCNL1-224ENST00000483789 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
CCNL1-224ENST00000483789 CAPN15O75808 1086 aa14.75□□□□□ -0.05
CCNL1-224ENST00000483789 APLP2Q06481 763 aa14.72□□□□□ -0.05
CCNL1-224ENST00000483789 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
CCNL1-224ENST00000483789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
CCNL1-224ENST00000483789 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
CCNL1-224ENST00000483789 DSG3P32926 999 aa14.65□□□□□ -0.06
CCNL1-224ENST00000483789 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
CCNL1-224ENST00000483789 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
CCNL1-224ENST00000483789 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
CCNL1-224ENST00000483789 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
CCNL1-224ENST00000483789 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
CCNL1-224ENST00000483789 ABCB7O75027 752 aa14.36□□□□□ -0.11
CCNL1-224ENST00000483789 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
CCNL1-224ENST00000483789 POLA2Q14181 598 aa14.12□□□□□ -0.15
CCNL1-224ENST00000483789 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
CCNL1-224ENST00000483789 POTEHQ6S545 545 aa14.06□□□□□ -0.16
CCNL1-224ENST00000483789 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
CCNL1-224ENST00000483789 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
CCNL1-224ENST00000483789 ZBTB22O15209 634 aa13.9□□□□□ -0.18
CCNL1-224ENST00000483789 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
CCNL1-224ENST00000483789 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
CCNL1-224ENST00000483789 CHRDL2Q6WN34 429 aa13.7□□□□□ -0.22
CCNL1-224ENST00000483789 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
CCNL1-224ENST00000483789 FBLN2P98095 1184 aa13.57□□□□□ -0.24
CCNL1-224ENST00000483789 REM2Q8IYK8 340 aaPredicted RBP13.55□□□□□ -0.24
CCNL1-224ENST00000483789 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
CCNL1-224ENST00000483789 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
CCNL1-224ENST00000483789 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
CCNL1-224ENST00000483789 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
CCNL1-224ENST00000483789 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
CCNL1-224ENST00000483789 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
CCNL1-224ENST00000483789 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
CCNL1-224ENST00000483789 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCNL1-224ENST00000483789 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
CCNL1-224ENST00000483789 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
CCNL1-224ENST00000483789 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
CCNL1-224ENST00000483789 SP7Q8TDD2 431 aaPredicted RBP13.18□□□□□ -0.3
CCNL1-224ENST00000483789 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
CCNL1-224ENST00000483789 HAX1O00165 279 aa13.15□□□□□ -0.3
CCNL1-224ENST00000483789 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
CCNL1-224ENST00000483789 PRKAR2AP13861 404 aaKnown RBP13.06□□□□□ -0.32
CCNL1-224ENST00000483789 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
CCNL1-224ENST00000483789 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
CCNL1-224ENST00000483789 EVX2Q03828 476 aa12.87□□□□□ -0.35
CCNL1-224ENST00000483789 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
CCNL1-224ENST00000483789 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
CCNL1-224ENST00000483789 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
CCNL1-224ENST00000483789 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
CCNL1-224ENST00000483789 FARP1Q9Y4F1 1045 aaPredicted RBP12.73□□□□□ -0.37
CCNL1-224ENST00000483789 GABBR2O75899 941 aa12.66□□□□□ -0.38
CCNL1-224ENST00000483789 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
CCNL1-224ENST00000483789 CLCN6P51797 869 aa12.62□□□□□ -0.39
CCNL1-224ENST00000483789 CREBZFQ9NS37 354 aa12.59□□□□□ -0.39
CCNL1-224ENST00000483789 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCNL1-224ENST00000483789 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
CCNL1-224ENST00000483789 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
CCNL1-224ENST00000483789 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
CCNL1-224ENST00000483789 PROM2Q8N271 834 aa12.45□□□□□ -0.42
CCNL1-224ENST00000483789 DCBLD2Q96PD2 775 aa12.38□□□□□ -0.43
CCNL1-224ENST00000483789 LHX8Q68G74 356 aa12.37□□□□□ -0.43
CCNL1-224ENST00000483789 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
CCNL1-224ENST00000483789 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
CCNL1-224ENST00000483789 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
CCNL1-224ENST00000483789 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
CCNL1-224ENST00000483789 PHF12Q96QT6 1004 aa12.24□□□□□ -0.45
CCNL1-224ENST00000483789 MIER1Q8N108 512 aa12.21□□□□□ -0.45
CCNL1-224ENST00000483789 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
CCNL1-224ENST00000483789 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
CCNL1-224ENST00000483789 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
CCNL1-224ENST00000483789 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
CCNL1-224ENST00000483789 FKBP8Q14318 412 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms