RNA–Protein interactions for RNA: ENST00000529710.5

PPP6R3-218, Transcript of protein phosphatase 6 regulatory subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PPP6R3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R3-218ENST00000529710 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
PPP6R3-218ENST00000529710 CCDC180Q9P1Z9 1646 aa16.53■□□□□ 0.24
PPP6R3-218ENST00000529710 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
PPP6R3-218ENST00000529710 ABCC9O60706 1549 aa16.01■□□□□ 0.15
PPP6R3-218ENST00000529710 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
PPP6R3-218ENST00000529710 SHROOM4Q9ULL8 1493 aa15.83■□□□□ 0.13
PPP6R3-218ENST00000529710 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
PPP6R3-218ENST00000529710 NACADO15069 1562 aa15.48■□□□□ 0.07
PPP6R3-218ENST00000529710 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
PPP6R3-218ENST00000529710 SCRIBQ14160 1630 aa15.41■□□□□ 0.06
PPP6R3-218ENST00000529710 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
PPP6R3-218ENST00000529710 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
PPP6R3-218ENST00000529710 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
PPP6R3-218ENST00000529710 UNC13AQ9UPW8 1703 aa15.08■□□□□ 0
PPP6R3-218ENST00000529710 BICRAQ9NZM4 1560 aa14.96□□□□□ -0.02
PPP6R3-218ENST00000529710 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
PPP6R3-218ENST00000529710 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
PPP6R3-218ENST00000529710 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
PPP6R3-218ENST00000529710 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
PPP6R3-218ENST00000529710 WIZO95785 1651 aa14.68□□□□□ -0.06
PPP6R3-218ENST00000529710 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
PPP6R3-218ENST00000529710 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
PPP6R3-218ENST00000529710 ATAD2BQ9ULI0 1458 aa14.49□□□□□ -0.09
PPP6R3-218ENST00000529710 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
PPP6R3-218ENST00000529710 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
PPP6R3-218ENST00000529710 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
PPP6R3-218ENST00000529710 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
PPP6R3-218ENST00000529710 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
PPP6R3-218ENST00000529710 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
PPP6R3-218ENST00000529710 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
PPP6R3-218ENST00000529710 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
PPP6R3-218ENST00000529710 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
PPP6R3-218ENST00000529710 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
PPP6R3-218ENST00000529710 HMGXB3Q12766 1538 aa14.25□□□□□ -0.13
PPP6R3-218ENST00000529710 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
PPP6R3-218ENST00000529710 ABCC8Q09428 1581 aa14.11□□□□□ -0.15
PPP6R3-218ENST00000529710 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
PPP6R3-218ENST00000529710 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
PPP6R3-218ENST00000529710 MYT1Q01538 1121 aa14.03□□□□□ -0.16
PPP6R3-218ENST00000529710 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.16
PPP6R3-218ENST00000529710 NESP48681 1621 aa14.02□□□□□ -0.17
PPP6R3-218ENST00000529710 CFTRP13569 1480 aa14.01□□□□□ -0.17
PPP6R3-218ENST00000529710 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
PPP6R3-218ENST00000529710 SLC24A1O60721 1099 aa13.97□□□□□ -0.17
PPP6R3-218ENST00000529710 LOC105371045A0A1W2PR82 267 aa13.97□□□□□ -0.17
PPP6R3-218ENST00000529710 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
PPP6R3-218ENST00000529710 FANCD2Q9BXW9 1451 aa13.89□□□□□ -0.19
PPP6R3-218ENST00000529710 SOGA1O94964 1423 aa13.85□□□□□ -0.19
PPP6R3-218ENST00000529710 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.2
PPP6R3-218ENST00000529710 CUX1P39880 1505 aa13.83□□□□□ -0.2
PPP6R3-218ENST00000529710 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
PPP6R3-218ENST00000529710 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
PPP6R3-218ENST00000529710 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
PPP6R3-218ENST00000529710 CEP164Q9UPV0 1460 aa13.79□□□□□ -0.2
PPP6R3-218ENST00000529710 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
PPP6R3-218ENST00000529710 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
PPP6R3-218ENST00000529710 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
PPP6R3-218ENST00000529710 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
PPP6R3-218ENST00000529710 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
PPP6R3-218ENST00000529710 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
PPP6R3-218ENST00000529710 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
PPP6R3-218ENST00000529710 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
PPP6R3-218ENST00000529710 TOPBP1Q92547 1522 aa13.7□□□□□ -0.22
PPP6R3-218ENST00000529710 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
PPP6R3-218ENST00000529710 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
PPP6R3-218ENST00000529710 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
PPP6R3-218ENST00000529710 CUX2O14529 1486 aa13.65□□□□□ -0.22
PPP6R3-218ENST00000529710 POLA1P09884 1462 aaPredicted RBP13.65□□□□□ -0.22
PPP6R3-218ENST00000529710 EEA1Q15075 1411 aa13.64□□□□□ -0.23
PPP6R3-218ENST00000529710 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
PPP6R3-218ENST00000529710 RANGAP1P46060 587 aaPredicted RBP13.62□□□□□ -0.23
PPP6R3-218ENST00000529710 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
PPP6R3-218ENST00000529710 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
PPP6R3-218ENST00000529710 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
PPP6R3-218ENST00000529710 RAPGEF2Q9Y4G8 1499 aa13.54□□□□□ -0.24
PPP6R3-218ENST00000529710 IGF1RP08069 1367 aa13.53□□□□□ -0.24
PPP6R3-218ENST00000529710 GOLGA3Q08378 1498 aa13.52□□□□□ -0.24
PPP6R3-218ENST00000529710 ABCA10Q8WWZ4 1543 aa13.52□□□□□ -0.25
PPP6R3-218ENST00000529710 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.254e-7■■■■■ 26.8
PPP6R3-218ENST00000529710 WDR62O43379 1518 aa13.49□□□□□ -0.25
PPP6R3-218ENST00000529710 CARMIL1Q5VZK9 1371 aa13.49□□□□□ -0.25
PPP6R3-218ENST00000529710 THOC2Q8NI27 1593 aaKnown RBP13.47□□□□□ -0.25
PPP6R3-218ENST00000529710 TNIKQ9UKE5 1360 aa13.47□□□□□ -0.25
PPP6R3-218ENST00000529710 PRXQ9BXM0 1461 aa13.47□□□□□ -0.25
PPP6R3-218ENST00000529710 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
PPP6R3-218ENST00000529710 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
PPP6R3-218ENST00000529710 KIF21BO75037 1637 aa13.45□□□□□ -0.26
PPP6R3-218ENST00000529710 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
PPP6R3-218ENST00000529710 CEP162Q5TB80 1403 aa13.44□□□□□ -0.26
PPP6R3-218ENST00000529710 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
PPP6R3-218ENST00000529710 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
PPP6R3-218ENST00000529710 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
PPP6R3-218ENST00000529710 FBLN2P98095 1184 aa13.39□□□□□ -0.27
PPP6R3-218ENST00000529710 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
PPP6R3-218ENST00000529710 HRCP23327 699 aa13.37□□□□□ -0.27
PPP6R3-218ENST00000529710 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
PPP6R3-218ENST00000529710 CLIP1P30622 1438 aa13.37□□□□□ -0.27
PPP6R3-218ENST00000529710 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
PPP6R3-218ENST00000529710 GRIN2BQ13224 1484 aa13.33□□□□□ -0.27
PPP6R3-218ENST00000529710 APLP2Q06481 763 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms