Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.11e-6■□□□□ 10.6
NCBP2P52298 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.021e-6■□□□□ 10.6
NCBP2P52298 ORAOV1-215ENST00000543562 444 ntTSL 1 (best)14.49□□□□□ -0.091e-6■□□□□ 10.6
NCBP2P52298 ORAOV1-202ENST00000355486 574 ntTSL 214.4□□□□□ -0.11e-6■□□□□ 10.6
NCBP2P52298 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.78□□□□□ -0.21e-6■□□□□ 10.6
NCBP2P52298 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC11.98□□□□□ -0.491e-6■□□□□ 10.6
NCBP2P52298 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC11.77□□□□□ -0.531e-6■□□□□ 10.6
NCBP2P52298 ORAOV1-203ENST00000441922 359 ntTSL 1 (best)9.6□□□□□ -0.871e-6■□□□□ 10.6
NCBP2P52298 LEMD2-202ENST00000421671 2323 ntTSL 320.21■□□□□ 0.835e-10■□□□□ 10.6
NCBP2P52298 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.465e-10■□□□□ 10.6
NCBP2P52298 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.295e-10■□□□□ 10.6
NCBP2P52298 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.085e-10■□□□□ 10.6
NCBP2P52298 SIK3-211ENST00000485363 764 ntTSL 1 (best)14.48□□□□□ -0.095e-10■□□□□ 10.6
NCBP2P52298 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.15e-10■□□□□ 10.6
NCBP2P52298 SIK3-204ENST00000445177 6331 ntAPPRIS ALT2 TSL 512.92□□□□□ -0.345e-10■□□□□ 10.6
NCBP2P52298 SIK3-203ENST00000415541 3816 ntTSL 1 (best)7.16□□□□□ -1.265e-10■□□□□ 10.6
NCBP2P52298 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.36e-7■□□□□ 10.6
NCBP2P52298 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.796e-7■□□□□ 10.6
NCBP2P52298 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.016e-7■□□□□ 10.6
NCBP2P52298 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.366e-7■□□□□ 10.6
NCBP2P52298 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.26□□□□□ -0.136e-6■□□□□ 10.6
NCBP2P52298 RBM14-209ENST00000512283 567 ntTSL 416.83■□□□□ 0.287e-22■□□□□ 10.6
NCBP2P52298 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.1□□□□□ -0.477e-22■□□□□ 10.6
NCBP2P52298 RBM14-203ENST00000409372 876 ntTSL 2 BASIC11.18□□□□□ -0.627e-22■□□□□ 10.6
NCBP2P52298 SLC36A4-202ENST00000524875 711 ntTSL 319.32■□□□□ 0.682e-8■□□□□ 10.6
NCBP2P52298 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.422e-8■□□□□ 10.6
NCBP2P52298 SLC36A4-205ENST00000527743 747 ntTSL 29.03□□□□□ -0.962e-8■□□□□ 10.6
NCBP2P52298 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.099e-12■□□□□ 10.6
NCBP2P52298 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.969e-12■□□□□ 10.6
NCBP2P52298 DVL3-204ENST00000435708 559 ntTSL 521.01■□□□□ 0.959e-12■□□□□ 10.6
NCBP2P52298 DVL3-205ENST00000462665 668 ntTSL 520.9■□□□□ 0.949e-12■□□□□ 10.6
NCBP2P52298 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.66■□□□□ 0.589e-12■□□□□ 10.6
NCBP2P52298 SLC39A14-209ENST00000520644 377 ntTSL 518.2■□□□□ 0.59e-12■□□□□ 10.6
NCBP2P52298 SLC39A14-212ENST00000524285 570 ntTSL 416.11■□□□□ 0.179e-12■□□□□ 10.6
NCBP2P52298 TNS3-205ENST00000434451 560 ntTSL 515.17■□□□□ 0.029e-12■□□□□ 10.6
NCBP2P52298 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.359e-12■□□□□ 10.6
NCBP2P52298 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.519e-12■□□□□ 10.6
NCBP2P52298 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.599e-12■□□□□ 10.6
NCBP2P52298 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.739e-12■□□□□ 10.6
NCBP2P52298 TNS3-208ENST00000457718 3836 ntTSL 510.44□□□□□ -0.749e-12■□□□□ 10.6
NCBP2P52298 TNS3-206ENST00000442536 1166 ntTSL 1 (best) BASIC9.81□□□□□ -0.849e-12■□□□□ 10.6
NCBP2P52298 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.57□□□□□ -1.529e-12■□□□□ 10.6
NCBP2P52298 PLCB1-224ENST00000636319 2930 ntTSL 517.58■□□□□ 0.411e-9■□□□□ 10.6
NCBP2P52298 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.075e-7■□□□□ 10.6
NCBP2P52298 MRS2-206ENST00000483634 1750 ntTSL 212.89□□□□□ -0.355e-7■□□□□ 10.6
NCBP2P52298 MRS2-203ENST00000378386 3313 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.65e-7■□□□□ 10.6
NCBP2P52298 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.765e-7■□□□□ 10.6
NCBP2P52298 MRS2-201ENST00000274747 3821 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.795e-7■□□□□ 10.6
NCBP2P52298 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.792e-9■□□□□ 10.6
NCBP2P52298 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.66■■□□□ 1.542e-9■□□□□ 10.6
NCBP2P52298 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.91■■□□□ 1.422e-9■□□□□ 10.6
NCBP2P52298 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.192e-9■□□□□ 10.6
NCBP2P52298 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.05□□□□□ -0.322e-9■□□□□ 10.6
NCBP2P52298 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.25□□□□□ -0.452e-9■□□□□ 10.6
NCBP2P52298 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC9.03□□□□□ -0.969e-9■□□□□ 10.6
NCBP2P52298 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC8.64□□□□□ -1.039e-9■□□□□ 10.6
NCBP2P52298 RAB2A-206ENST00000481569 506 ntTSL 25.78□□□□□ -1.489e-9■□□□□ 10.6
NCBP2P52298 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.62□□□□□ -1.512e-9■□□□□ 10.6
NCBP2P52298 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.49e-7■□□□□ 10.5
NCBP2P52298 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.059e-7■□□□□ 10.5
NCBP2P52298 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.58■□□□□ 0.564e-8■□□□□ 10.5
NCBP2P52298 EEF1D-210ENST00000525223 610 ntTSL 313.57□□□□□ -0.244e-8■□□□□ 10.5
NCBP2P52298 EEF1D-234ENST00000530616 749 ntTSL 312.43□□□□□ -0.424e-8■□□□□ 10.5
NCBP2P52298 CLK1-211ENST00000481641 690 ntTSL 416.86■□□□□ 0.291e-7■□□□□ 10.5
NCBP2P52298 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.89■□□□□ 0.298e-17■□□□□ 10.5
NCBP2P52298 DCTN5-202ENST00000563188 547 ntTSL 515.67■□□□□ 0.18e-17■□□□□ 10.5
NCBP2P52298 DCTN5-205ENST00000566053 571 ntTSL 46.81□□□□□ -1.328e-17■□□□□ 10.5
NCBP2P52298 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.72□□□□□ -1.338e-17■□□□□ 10.5
NCBP2P52298 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.438e-17■□□□□ 10.5
NCBP2P52298 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.34□□□□□ -1.718e-17■□□□□ 10.5
NCBP2P52298 NFE2L1-219ENST00000584137 529 ntTSL 420.22■□□□□ 0.835e-6■□□□□ 10.5
NCBP2P52298 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.435e-6■□□□□ 10.5
NCBP2P52298 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC12.32□□□□□ -0.445e-6■□□□□ 10.5
NCBP2P52298 NFE2L1-209ENST00000579889 568 ntTSL 312.21□□□□□ -0.455e-6■□□□□ 10.5
NCBP2P52298 NFE2L1-201ENST00000357480 4672 ntTSL 1 (best) BASIC10.48□□□□□ -0.735e-6■□□□□ 10.5
NCBP2P52298 CROCCP2-201ENST00000362058 2029 ntTSL 222.96■■□□□ 1.272e-9■□□□□ 10.5
NCBP2P52298 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.162e-7■□□□□ 10.5
NCBP2P52298 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.03■□□□□ 0.162e-7■□□□□ 10.5
NCBP2P52298 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.55□□□□□ -0.242e-7■□□□□ 10.5
NCBP2P52298 PLCB1-219ENST00000630495 759 ntTSL 57.42□□□□□ -1.222e-7■□□□□ 10.5
NCBP2P52298 PLCB1-212ENST00000625874 3206 ntTSL 27.15□□□□□ -1.272e-7■□□□□ 10.5
NCBP2P52298 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.03□□□□□ -1.762e-7■□□□□ 10.5
NCBP2P52298 CKLF-207ENST00000534692 546 ntTSL 321.16■□□□□ 0.986e-7■□□□□ 10.5
NCBP2P52298 CKLF-206ENST00000526149 564 ntTSL 220.62■□□□□ 0.896e-7■□□□□ 10.5
NCBP2P52298 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.25■□□□□ 0.836e-7■□□□□ 10.5
NCBP2P52298 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.586e-7■□□□□ 10.5
NCBP2P52298 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.546e-7■□□□□ 10.5
NCBP2P52298 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.196e-7■□□□□ 10.5
NCBP2P52298 CKLF-CMTM1-202ENST00000527845 504 ntTSL 315.8■□□□□ 0.126e-7■□□□□ 10.5
NCBP2P52298 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.086e-7■□□□□ 10.5
NCBP2P52298 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.286e-7■□□□□ 10.5
NCBP2P52298 CKLF-CMTM1-201ENST00000527729 585 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.96e-7■□□□□ 10.5
NCBP2P52298 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.77e-11■□□□□ 10.5
NCBP2P52298 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.497e-11■□□□□ 10.5
NCBP2P52298 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.387e-11■□□□□ 10.5
NCBP2P52298 SRRM2-222ENST00000575009 1146 ntTSL 524.07■■□□□ 1.442e-9■□□□□ 10.5
NCBP2P52298 SRRM2-226ENST00000576415 461 ntTSL 223.68■■□□□ 1.382e-9■□□□□ 10.5
NCBP2P52298 SRRM2-223ENST00000575701 860 ntTSL 323.33■■□□□ 1.332e-9■□□□□ 10.5
NCBP2P52298 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)19.52■□□□□ 0.712e-9■□□□□ 10.5
NCBP2P52298 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)16.02■□□□□ 0.162e-9■□□□□ 10.5
Retrieved 100 of 18,329 protein–RNA pairs in 299.7 ms