RNA–Protein interactions for RNA: ENST00000609386.1

SLF2-205, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS ALT2 BASIC

Gene SLF2, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-205ENST00000609386 NISCHQ9Y2I1 1504 aa45.33■■■■■ 4.85
SLF2-205ENST00000609386 CCDC180Q9P1Z9 1646 aa40.53■■■■■ 4.08
SLF2-205ENST00000609386 ABCC9O60706 1549 aa40.06■■■■■ 4
SLF2-205ENST00000609386 RB1CC1Q8TDY2 1594 aa38.33■■■■□ 3.73
SLF2-205ENST00000609386 NACADO15069 1562 aa38.14■■■■□ 3.7
SLF2-205ENST00000609386 DCAF8L2P0C7V8 631 aa38.14■■■■□ 3.7
SLF2-205ENST00000609386 MYO15BQ96JP2 1530 aa37.7■■■■□ 3.63
SLF2-205ENST00000609386 ZCCHC6Q5VYS8 1495 aaKnown RBP37.68■■■■□ 3.62
SLF2-205ENST00000609386 UNC13AQ9UPW8 1703 aa37.56■■■■□ 3.6
SLF2-205ENST00000609386 DCAF1Q9Y4B6 1507 aa37.42■■■■□ 3.58
SLF2-205ENST00000609386 PABPN1Q86U42 306 aaKnown RBP eCLIP37.34■■■■□ 3.57
SLF2-205ENST00000609386 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
SLF2-205ENST00000609386 DNAJC5BQ9UF47 199 aa37.03■■■■□ 3.52
SLF2-205ENST00000609386 SCRIBQ14160 1630 aa37.03■■■■□ 3.52
SLF2-205ENST00000609386 SHROOM4Q9ULL8 1493 aa36.66■■■■□ 3.46
SLF2-205ENST00000609386 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
SLF2-205ENST00000609386 CC2D2AQ9P2K1 1620 aa36.22■■■■□ 3.39
SLF2-205ENST00000609386 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
SLF2-205ENST00000609386 SMARCA4P51532 1647 aa35.32■■■■□ 3.24
SLF2-205ENST00000609386 BAZ1AQ9NRL2 1556 aaPredicted RBP35.18■■■■□ 3.22
SLF2-205ENST00000609386 ATAD2BQ9ULI0 1458 aa35.16■■■■□ 3.22
SLF2-205ENST00000609386 NCAPD3P42695 1498 aa35.15■■■■□ 3.22
SLF2-205ENST00000609386 SMARCA2P51531 1590 aa35.13■■■■□ 3.21
SLF2-205ENST00000609386 HMGXB3Q12766 1538 aa35■■■■□ 3.19
SLF2-205ENST00000609386 MROH2BQ7Z745 1585 aa34.96■■■■□ 3.19
SLF2-205ENST00000609386 BAZ1BQ9UIG0 1483 aaKnown RBP34.9■■■■□ 3.18
SLF2-205ENST00000609386 PEG3Q9GZU2 1588 aa34.88■■■■□ 3.17
SLF2-205ENST00000609386 WIZO95785 1651 aa34.63■■■■□ 3.13
SLF2-205ENST00000609386 ERCC6Q03468 1493 aa34.58■■■■□ 3.13
SLF2-205ENST00000609386 NESP48681 1621 aa34.54■■■■□ 3.12
SLF2-205ENST00000609386 LAMC3Q9Y6N6 1575 aa34.37■■■■□ 3.09
SLF2-205ENST00000609386 RSF1Q96T23 1441 aaPredicted RBP34.37■■■■□ 3.09
SLF2-205ENST00000609386 CUX2O14529 1486 aa34.27■■■■□ 3.08
SLF2-205ENST00000609386 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
SLF2-205ENST00000609386 TOP2AP11388 1531 aaKnown RBP34.18■■■■□ 3.06
SLF2-205ENST00000609386 CADPSQ9ULU8 1353 aa34.13■■■■□ 3.05
SLF2-205ENST00000609386 PDS5BQ9NTI5 1447 aa34.13■■■■□ 3.05
SLF2-205ENST00000609386 THOC2Q8NI27 1593 aaKnown RBP34.11■■■■□ 3.05
SLF2-205ENST00000609386 CFTRP13569 1480 aa33.85■■■■□ 3.01
SLF2-205ENST00000609386 MRC2Q9UBG0 1479 aa33.82■■■■□ 3.01
SLF2-205ENST00000609386 CEP164Q9UPV0 1460 aa33.82■■■■□ 3
SLF2-205ENST00000609386 FANCD2Q9BXW9 1451 aa33.8■■■■□ 3
SLF2-205ENST00000609386 CCDC88BA6NC98 1476 aa33.76■■■□□ 2.99
SLF2-205ENST00000609386 WDR62O43379 1518 aa33.72■■■□□ 2.99
SLF2-205ENST00000609386 PRDM2Q13029 1718 aa33.71■■■□□ 2.99
SLF2-205ENST00000609386 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
SLF2-205ENST00000609386 URB2Q14146 1524 aaKnown RBP33.48■■■□□ 2.95
SLF2-205ENST00000609386 SUPT5HO00267 1087 aaKnown RBP33.31■■■□□ 2.92
SLF2-205ENST00000609386 TOPBP1Q92547 1522 aa33.21■■■□□ 2.91
SLF2-205ENST00000609386 DNMBPQ6XZF7 1577 aa33.16■■■□□ 2.9
SLF2-205ENST00000609386 ABCC8Q09428 1581 aa33.14■■■□□ 2.9
SLF2-205ENST00000609386 IFT140Q96RY7 1462 aa33.08■■■□□ 2.89
SLF2-205ENST00000609386 ZNF608Q9ULD9 1512 aaPredicted RBP33■■■□□ 2.87
SLF2-205ENST00000609386 POLA1P09884 1462 aaPredicted RBP32.9■■■□□ 2.86
SLF2-205ENST00000609386 EIF4G3O43432 1585 aaKnown RBP32.9■■■□□ 2.86
SLF2-205ENST00000609386 TARBP1Q13395 1621 aaKnown RBP32.89■■■□□ 2.86
SLF2-205ENST00000609386 CUX1P39880 1505 aa32.83■■■□□ 2.85
SLF2-205ENST00000609386 FGD5Q6ZNL6 1462 aa32.79■■■□□ 2.84
SLF2-205ENST00000609386 RAD54L2Q9Y4B4 1467 aa32.79■■■□□ 2.84
SLF2-205ENST00000609386 OSCARQ8IYS5 282 aa32.77■■■□□ 2.84
SLF2-205ENST00000609386 AQRO60306 1485 aaKnown RBP eCLIP32.75■■■□□ 2.83
SLF2-205ENST00000609386 SOGA1O94964 1423 aa32.75■■■□□ 2.83
SLF2-205ENST00000609386 TDRD9Q8NDG6 1382 aaKnown RBP32.62■■■□□ 2.81
SLF2-205ENST00000609386 CHD1O14646 1710 aa32.61■■■□□ 2.81
SLF2-205ENST00000609386 WDR97A6NE52 1622 aa32.57■■■□□ 2.8
SLF2-205ENST00000609386 TRIM41Q8WV44 630 aa32.51■■■□□ 2.79
SLF2-205ENST00000609386 FBLN2P98095 1184 aa32.5■■■□□ 2.79
SLF2-205ENST00000609386 SNAPC4Q5SXM2 1469 aa32.48■■■□□ 2.79
SLF2-205ENST00000609386 BIVM-ERCC5R4GMW8 1640 aa32.47■■■□□ 2.79
SLF2-205ENST00000609386 WRNQ14191 1432 aaPredicted RBP eCLIP32.45■■■□□ 2.79
SLF2-205ENST00000609386 SYNJ1O43426 1573 aa32.45■■■□□ 2.78
SLF2-205ENST00000609386 TOP2BQ02880 1626 aa32.44■■■□□ 2.78
SLF2-205ENST00000609386 PBRM1Q86U86 1689 aa32.44■■■□□ 2.78
SLF2-205ENST00000609386 GRIN2BQ13224 1484 aa32.42■■■□□ 2.78
SLF2-205ENST00000609386 ABCA10Q8WWZ4 1543 aa32.41■■■□□ 2.78
SLF2-205ENST00000609386 RIMBP3CA6NJZ7 1639 aa32.39■■■□□ 2.78
SLF2-205ENST00000609386 RIMBP3BA6NNM3 1639 aa32.39■■■□□ 2.78
SLF2-205ENST00000609386 RIMBP3Q9UFD9 1639 aa32.39■■■□□ 2.78
SLF2-205ENST00000609386 GAPVD1Q14C86 1478 aa32.38■■■□□ 2.77
SLF2-205ENST00000609386 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
SLF2-205ENST00000609386 MAGI1Q96QZ7 1491 aaPredicted RBP32.36■■■□□ 2.77
SLF2-205ENST00000609386 CHMP7Q8WUX9 453 aaPredicted RBP32.29■■■□□ 2.76
SLF2-205ENST00000609386 ARHGEF11O15085 1522 aa32.29■■■□□ 2.76
SLF2-205ENST00000609386 SYNJ2O15056 1496 aa32.24■■■□□ 2.75
SLF2-205ENST00000609386 CLASP1Q7Z460 1538 aa32.14■■■□□ 2.74
SLF2-205ENST00000609386 ADAMTS12P58397 1594 aa32.1■■■□□ 2.73
SLF2-205ENST00000609386 ERICH3Q5RHP9 1530 aa32.02■■■□□ 2.72
SLF2-205ENST00000609386 CYB5RLQ6IPT4 315 aa32.01■■■□□ 2.71
SLF2-205ENST00000609386 GRIN2AQ12879 1464 aa32.01■■■□□ 2.71
SLF2-205ENST00000609386 ARAP1Q96P48 1450 aa32■■■□□ 2.71
SLF2-205ENST00000609386 FHAD1B1AJZ9 1412 aa31.96■■■□□ 2.71
SLF2-205ENST00000609386 CEP170Q5SW79 1584 aa31.9■■■□□ 2.7
SLF2-205ENST00000609386 NUP160Q12769 1436 aa31.83■■■□□ 2.69
SLF2-205ENST00000609386 KIF27Q86VH2 1401 aa31.8■■■□□ 2.68
SLF2-205ENST00000609386 ERCC6L2Q5T890 1561 aa31.72■■■□□ 2.67
SLF2-205ENST00000609386 CUL7Q14999 1698 aa31.71■■■□□ 2.67
SLF2-205ENST00000609386 SHROOM2Q13796 1616 aa31.69■■■□□ 2.66
SLF2-205ENST00000609386 IGF1RP08069 1367 aa31.67■■■□□ 2.66
SLF2-205ENST00000609386 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
SLF2-205ENST00000609386 TRHP20396 242 aaPredicted RBP31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms