RNA–Protein interactions for RNA: ENST00000576924.5

SRRM2-230, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 3,314 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-230ENST00000576924 NISCHQ9Y2I1 1504 aa32.65■■■□□ 2.82
SRRM2-230ENST00000576924 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
SRRM2-230ENST00000576924 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
SRRM2-230ENST00000576924 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
SRRM2-230ENST00000576924 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
SRRM2-230ENST00000576924 PCGF6Q9BYE7 350 aa27.9■■■□□ 2.06
SRRM2-230ENST00000576924 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
SRRM2-230ENST00000576924 LOC105371045A0A1W2PR82 267 aa27.69■■■□□ 2.02
SRRM2-230ENST00000576924 FAM9AQ8IZU1 332 aaPredicted RBP27.64■■■□□ 2.02
SRRM2-230ENST00000576924 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
SRRM2-230ENST00000576924 PPARGC1BQ86YN6 1023 aaKnown RBP27.38■■□□□ 1.97
SRRM2-230ENST00000576924 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
SRRM2-230ENST00000576924 HRCP23327 699 aa27.15■■□□□ 1.94
SRRM2-230ENST00000576924 TRIM41Q8WV44 630 aa27.06■■□□□ 1.92
SRRM2-230ENST00000576924 TTBK1Q5TCY1 1321 aaPredicted RBP27.06■■□□□ 1.92
SRRM2-230ENST00000576924 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
SRRM2-230ENST00000576924 ABCC9O60706 1549 aa26.7■■□□□ 1.86
SRRM2-230ENST00000576924 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
SRRM2-230ENST00000576924 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
SRRM2-230ENST00000576924 RANGAP1P46060 587 aaPredicted RBP26.42■■□□□ 1.82
SRRM2-230ENST00000576924 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
SRRM2-230ENST00000576924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
SRRM2-230ENST00000576924 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
SRRM2-230ENST00000576924 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
SRRM2-230ENST00000576924 UBTFP17480 764 aaKnown RBP26.11■■□□□ 1.77
SRRM2-230ENST00000576924 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
SRRM2-230ENST00000576924 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
SRRM2-230ENST00000576924 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
SRRM2-230ENST00000576924 ZEB1P37275 1124 aaPredicted RBP25.89■■□□□ 1.73
SRRM2-230ENST00000576924 HNRNPUL2Q1KMD3 747 aaKnown RBP25.73■■□□□ 1.71
SRRM2-230ENST00000576924 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.7
SRRM2-230ENST00000576924 YTHDC1Q96MU7 727 aaKnown RBP25.66■■□□□ 1.7
SRRM2-230ENST00000576924 APLP2Q06481 763 aa25.57■■□□□ 1.68
SRRM2-230ENST00000576924 WIZO95785 1651 aa25.5■■□□□ 1.67
SRRM2-230ENST00000576924 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
SRRM2-230ENST00000576924 DIEXFQ68CQ4 756 aaKnown RBP25.39■■□□□ 1.65
SRRM2-230ENST00000576924 ABCC8Q09428 1581 aa25.39■■□□□ 1.65
SRRM2-230ENST00000576924 ITGAEP38570 1179 aa25.37■■□□□ 1.65
SRRM2-230ENST00000576924 SCAF1Q9H7N4 1312 aaKnown RBP25.33■■□□□ 1.65
SRRM2-230ENST00000576924 SOGA1O94964 1423 aa25.33■■□□□ 1.65
SRRM2-230ENST00000576924 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
SRRM2-230ENST00000576924 NACADO15069 1562 aa25.28■■□□□ 1.64
SRRM2-230ENST00000576924 ATP1B4Q9UN42 357 aaPredicted RBP25.28■■□□□ 1.64
SRRM2-230ENST00000576924 NEUROD1Q13562 356 aa25.17■■□□□ 1.62
SRRM2-230ENST00000576924 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
SRRM2-230ENST00000576924 CEP162Q5TB80 1403 aa25.14■■□□□ 1.62
SRRM2-230ENST00000576924 GTF3C3Q9Y5Q9 886 aa25.12■■□□□ 1.61
SRRM2-230ENST00000576924 CENPBP07199 599 aaPredicted RBP25.12■■□□□ 1.61
SRRM2-230ENST00000576924 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
SRRM2-230ENST00000576924 ACIN1Q9UKV3 1341 aaKnown RBP24.98■■□□□ 1.59
SRRM2-230ENST00000576924 ZNF316A6NFI3 1004 aaPredicted RBP24.92■■□□□ 1.58
SRRM2-230ENST00000576924 P3H3Q8IVL6 736 aa24.89■■□□□ 1.58
SRRM2-230ENST00000576924 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
SRRM2-230ENST00000576924 MIER1Q8N108 512 aa24.82■■□□□ 1.56
SRRM2-230ENST00000576924 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
SRRM2-230ENST00000576924 CLIP1P30622 1438 aa24.77■■□□□ 1.56
SRRM2-230ENST00000576924 TOP2AP11388 1531 aaKnown RBP24.73■■□□□ 1.55
SRRM2-230ENST00000576924 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
SRRM2-230ENST00000576924 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
SRRM2-230ENST00000576924 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
SRRM2-230ENST00000576924 FAM50AQ14320 339 aaKnown RBP24.66■■□□□ 1.54
SRRM2-230ENST00000576924 KANK4Q5T7N3 995 aaPredicted RBP24.61■■□□□ 1.53
SRRM2-230ENST00000576924 BAZ1BQ9UIG0 1483 aaKnown RBP24.59■■□□□ 1.53
SRRM2-230ENST00000576924 HIRIP3Q9BW71 556 aaPredicted RBP24.54■■□□□ 1.52
SRRM2-230ENST00000576924 RAPGEF2Q9Y4G8 1499 aa24.53■■□□□ 1.52
SRRM2-230ENST00000576924 PELP1Q8IZL8 1130 aaKnown RBP24.49■■□□□ 1.51
SRRM2-230ENST00000576924 ARID3CA6NKF2 412 aa24.49■■□□□ 1.51
SRRM2-230ENST00000576924 EEA1Q15075 1411 aa24.47■■□□□ 1.51
SRRM2-230ENST00000576924 CEP164Q9UPV0 1460 aa24.47■■□□□ 1.51
SRRM2-230ENST00000576924 BCANQ96GW7 911 aa24.41■■□□□ 1.5
SRRM2-230ENST00000576924 CNGB1Q14028 1251 aaPredicted RBP24.4■■□□□ 1.5
SRRM2-230ENST00000576924 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.49
SRRM2-230ENST00000576924 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
SRRM2-230ENST00000576924 VPS8Q8N3P4 1428 aa24.33■■□□□ 1.48
SRRM2-230ENST00000576924 SIN3AQ96ST3 1273 aa24.27■■□□□ 1.48
SRRM2-230ENST00000576924 DDX10Q13206 875 aaKnown RBP24.25■■□□□ 1.47
SRRM2-230ENST00000576924 EIF4G1Q04637 1599 aaKnown RBP24.24■■□□□ 1.47
SRRM2-230ENST00000576924 UNC13AQ9UPW8 1703 aa24.22■■□□□ 1.47
SRRM2-230ENST00000576924 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.46
SRRM2-230ENST00000576924 KCNH8Q96L42 1107 aa24.18■■□□□ 1.46
SRRM2-230ENST00000576924 KIF27Q86VH2 1401 aa24.11■■□□□ 1.45
SRRM2-230ENST00000576924 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
SRRM2-230ENST00000576924 CUX2O14529 1486 aa24.06■■□□□ 1.44
SRRM2-230ENST00000576924 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
SRRM2-230ENST00000576924 POLR3GLQ9BT43 218 aa24.05■■□□□ 1.44
SRRM2-230ENST00000576924 KIF21BO75037 1637 aa24.04■■□□□ 1.44
SRRM2-230ENST00000576924 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.44
SRRM2-230ENST00000576924 CCNB3Q8WWL7 1395 aa24■■□□□ 1.43
SRRM2-230ENST00000576924 ARAP1Q96P48 1450 aa23.96■■□□□ 1.43
SRRM2-230ENST00000576924 CARMIL1Q5VZK9 1371 aa23.94■■□□□ 1.42
SRRM2-230ENST00000576924 SENP3-EIF4A1A0A087X0R7 540 aa23.91■■□□□ 1.42
SRRM2-230ENST00000576924 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
SRRM2-230ENST00000576924 RRP7BPQ9NSQ0 103 aa23.9■■□□□ 1.42
SRRM2-230ENST00000576924 FKBP8Q14318 412 aa23.88■■□□□ 1.41
SRRM2-230ENST00000576924 NEFLP07196 543 aa23.85■■□□□ 1.41
SRRM2-230ENST00000576924 IRX6P78412 446 aaPredicted RBP23.82■■□□□ 1.4
SRRM2-230ENST00000576924 FBLN2P98095 1184 aa23.81■■□□□ 1.4
SRRM2-230ENST00000576924 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
SRRM2-230ENST00000576924 SUPT16HQ9Y5B9 1047 aaKnown RBP23.81■■□□□ 1.4
SRRM2-230ENST00000576924 IGF1RP08069 1367 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms