RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 NISCHQ9Y2I1 1504 aa45.94■■■■■ 4.94
LEMD2-202ENST00000421671 CCDC180Q9P1Z9 1646 aa39.41■■■■□ 3.9
LEMD2-202ENST00000421671 ZCCHC6Q5VYS8 1495 aaKnown RBP38.79■■■■□ 3.8
LEMD2-202ENST00000421671 SHROOM4Q9ULL8 1493 aa38.52■■■■□ 3.76
LEMD2-202ENST00000421671 DCAF8L2P0C7V8 631 aa38.08■■■■□ 3.69
LEMD2-202ENST00000421671 DCAF1Q9Y4B6 1507 aa37.81■■■■□ 3.64
LEMD2-202ENST00000421671 SUPT5HO00267 1087 aaKnown RBP37.53■■■■□ 3.6
LEMD2-202ENST00000421671 ABCC9O60706 1549 aa37.28■■■■□ 3.56
LEMD2-202ENST00000421671 MYO15BQ96JP2 1530 aa36.91■■■■□ 3.5
LEMD2-202ENST00000421671 SCRIBQ14160 1630 aa36.69■■■■□ 3.46
LEMD2-202ENST00000421671 NACADO15069 1562 aa36.55■■■■□ 3.44
LEMD2-202ENST00000421671 CHIC1Q5VXU3 224 aa36.41■■■■□ 3.42
LEMD2-202ENST00000421671 RB1CC1Q8TDY2 1594 aa36.19■■■■□ 3.38
LEMD2-202ENST00000421671 RSF1Q96T23 1441 aaPredicted RBP36.11■■■■□ 3.37
LEMD2-202ENST00000421671 HRCP23327 699 aa35.8■■■■□ 3.32
LEMD2-202ENST00000421671 CECR2Q9BXF3 1484 aa35.79■■■■□ 3.32
LEMD2-202ENST00000421671 UNC13AQ9UPW8 1703 aa35.67■■■■□ 3.3
LEMD2-202ENST00000421671 MROH2BQ7Z745 1585 aa35.65■■■■□ 3.3
LEMD2-202ENST00000421671 WIZO95785 1651 aa35.44■■■■□ 3.26
LEMD2-202ENST00000421671 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.266e-9■□□□□ 10.2
LEMD2-202ENST00000421671 BAZ1AQ9NRL2 1556 aaPredicted RBP35.32■■■■□ 3.24
LEMD2-202ENST00000421671 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
LEMD2-202ENST00000421671 LOC105371045A0A1W2PR82 267 aa35.21■■■■□ 3.23
LEMD2-202ENST00000421671 SMARCA4P51532 1647 aa35.1■■■■□ 3.21
LEMD2-202ENST00000421671 TRIM41Q8WV44 630 aa35.06■■■■□ 3.2
LEMD2-202ENST00000421671 PCGF6Q9BYE7 350 aa34.94■■■■□ 3.18
LEMD2-202ENST00000421671 TOP2AP11388 1531 aaKnown RBP34.93■■■■□ 3.18
LEMD2-202ENST00000421671 EIF4G1Q04637 1599 aaKnown RBP34.88■■■■□ 3.17
LEMD2-202ENST00000421671 PPARGC1BQ86YN6 1023 aaKnown RBP34.76■■■■□ 3.15
LEMD2-202ENST00000421671 SMARCA2P51531 1590 aa34.72■■■■□ 3.15
LEMD2-202ENST00000421671 CCDC88BA6NC98 1476 aa34.7■■■■□ 3.15
LEMD2-202ENST00000421671 FAM9AQ8IZU1 332 aaPredicted RBP34.66■■■■□ 3.14
LEMD2-202ENST00000421671 PELP1Q8IZL8 1130 aaKnown RBP34.6■■■■□ 3.13
LEMD2-202ENST00000421671 PEG3Q9GZU2 1588 aa34.53■■■■□ 3.12
LEMD2-202ENST00000421671 ABCC8Q09428 1581 aa34.42■■■■□ 3.1
LEMD2-202ENST00000421671 ATAD2BQ9ULI0 1458 aa34.33■■■■□ 3.09
LEMD2-202ENST00000421671 EHMT2Q96KQ7 1210 aa34.27■■■■□ 3.08
LEMD2-202ENST00000421671 TRIM26Q12899 539 aaPredicted RBP34.21■■■■□ 3.07
LEMD2-202ENST00000421671 BAZ1BQ9UIG0 1483 aaKnown RBP34.17■■■■□ 3.06
LEMD2-202ENST00000421671 SOGA1O94964 1423 aa33.97■■■■□ 3.03
LEMD2-202ENST00000421671 ZEB1P37275 1124 aaPredicted RBP33.91■■■■□ 3.02
LEMD2-202ENST00000421671 WRNQ14191 1432 aaPredicted RBP eCLIP33.91■■■■□ 3.02
LEMD2-202ENST00000421671 RUSC2Q8N2Y8 1516 aa33.85■■■■□ 3.01
LEMD2-202ENST00000421671 SYNJ1O43426 1573 aa33.82■■■■□ 3.01
LEMD2-202ENST00000421671 NCAPD3P42695 1498 aa33.82■■■■□ 3
LEMD2-202ENST00000421671 EEA1Q15075 1411 aa33.82■■■■□ 3
LEMD2-202ENST00000421671 HMGXB3Q12766 1538 aa33.75■■■□□ 2.99
LEMD2-202ENST00000421671 CSRNP3Q8WYN3 585 aa33.71■■■□□ 2.99
LEMD2-202ENST00000421671 SCAF1Q9H7N4 1312 aaKnown RBP33.68■■■□□ 2.98
LEMD2-202ENST00000421671 TNIKQ9UKE5 1360 aa33.63■■■□□ 2.97
LEMD2-202ENST00000421671 CEP162Q5TB80 1403 aa33.61■■■□□ 2.97
LEMD2-202ENST00000421671 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.97
LEMD2-202ENST00000421671 GOLGA3Q08378 1498 aa33.52■■■□□ 2.96
LEMD2-202ENST00000421671 TOP2BQ02880 1626 aa33.49■■■□□ 2.95
LEMD2-202ENST00000421671 KIF21BO75037 1637 aa33.43■■■□□ 2.94
LEMD2-202ENST00000421671 UBTFP17480 764 aaKnown RBP33.43■■■□□ 2.94
LEMD2-202ENST00000421671 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
LEMD2-202ENST00000421671 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
LEMD2-202ENST00000421671 MYT1Q01538 1121 aa33.32■■■□□ 2.92
LEMD2-202ENST00000421671 CFTRP13569 1480 aa33.31■■■□□ 2.92
LEMD2-202ENST00000421671 CUX1P39880 1505 aa33.23■■■□□ 2.91
LEMD2-202ENST00000421671 RAPGEF2Q9Y4G8 1499 aa33.2■■■□□ 2.9
LEMD2-202ENST00000421671 PRDM2Q13029 1718 aa33.15■■■□□ 2.9
LEMD2-202ENST00000421671 CADPSQ9ULU8 1353 aa33.09■■■□□ 2.89
LEMD2-202ENST00000421671 CLIP1P30622 1438 aa33.08■■■□□ 2.89
LEMD2-202ENST00000421671 DNAJC5BQ9UF47 199 aa33.07■■■□□ 2.88
LEMD2-202ENST00000421671 TTBK1Q5TCY1 1321 aaPredicted RBP33.06■■■□□ 2.88
LEMD2-202ENST00000421671 ACIN1Q9UKV3 1341 aaKnown RBP33.01■■■□□ 2.88
LEMD2-202ENST00000421671 PRXQ9BXM0 1461 aa33■■■□□ 2.87
LEMD2-202ENST00000421671 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
LEMD2-202ENST00000421671 NESP48681 1621 aa32.93■■■□□ 2.86
LEMD2-202ENST00000421671 VPS8Q8N3P4 1428 aa32.91■■■□□ 2.86
LEMD2-202ENST00000421671 KIF27Q86VH2 1401 aa32.9■■■□□ 2.86
LEMD2-202ENST00000421671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.87■■■□□ 2.85
LEMD2-202ENST00000421671 NEUROD1Q13562 356 aa32.8■■■□□ 2.84
LEMD2-202ENST00000421671 FANCD2Q9BXW9 1451 aa32.79■■■□□ 2.84
LEMD2-202ENST00000421671 RANGAP1P46060 587 aaPredicted RBP32.77■■■□□ 2.84
LEMD2-202ENST00000421671 CCER1Q8TC90 406 aaPredicted RBP32.73■■■□□ 2.83
LEMD2-202ENST00000421671 FGD5Q6ZNL6 1462 aa32.68■■■□□ 2.82
LEMD2-202ENST00000421671 CUX2O14529 1486 aa32.67■■■□□ 2.82
LEMD2-202ENST00000421671 ARAP1Q96P48 1450 aa32.67■■■□□ 2.82
LEMD2-202ENST00000421671 CENPBP07199 599 aaPredicted RBP32.67■■■□□ 2.82
LEMD2-202ENST00000421671 GTF3C3Q9Y5Q9 886 aa32.63■■■□□ 2.81
LEMD2-202ENST00000421671 IGF1RP08069 1367 aa32.6■■■□□ 2.81
LEMD2-202ENST00000421671 APLP2Q06481 763 aa32.56■■■□□ 2.8
LEMD2-202ENST00000421671 LAMC3Q9Y6N6 1575 aa32.54■■■□□ 2.8
LEMD2-202ENST00000421671 DNMBPQ6XZF7 1577 aa32.49■■■□□ 2.79
LEMD2-202ENST00000421671 TOPBP1Q92547 1522 aa32.48■■■□□ 2.79
LEMD2-202ENST00000421671 DIEXFQ68CQ4 756 aaKnown RBP32.48■■■□□ 2.79
LEMD2-202ENST00000421671 ARHGAP35Q9NRY4 1499 aa32.47■■■□□ 2.79
LEMD2-202ENST00000421671 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
LEMD2-202ENST00000421671 CARMIL1Q5VZK9 1371 aa32.42■■■□□ 2.78
LEMD2-202ENST00000421671 URB2Q14146 1524 aaKnown RBP32.41■■■□□ 2.78
LEMD2-202ENST00000421671 POLA1P09884 1462 aaPredicted RBP32.4■■■□□ 2.78
LEMD2-202ENST00000421671 HNRNPUL2Q1KMD3 747 aaKnown RBP32.39■■■□□ 2.78
LEMD2-202ENST00000421671 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
LEMD2-202ENST00000421671 ABCA10Q8WWZ4 1543 aa32.34■■■□□ 2.77
LEMD2-202ENST00000421671 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
LEMD2-202ENST00000421671 KANK4Q5T7N3 995 aaPredicted RBP32.32■■■□□ 2.76
LEMD2-202ENST00000421671 WDR97A6NE52 1622 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms