RNA–Protein interactions for RNA: ENST00000293760.9

LEMD2-201, Transcript of LEM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD2, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-201ENST00000293760 NISCHQ9Y2I1 1504 aa37.67■■■■□ 3.62
LEMD2-201ENST00000293760 SHROOM4Q9ULL8 1493 aa33.45■■■□□ 2.95
LEMD2-201ENST00000293760 SUPT5HO00267 1087 aaKnown RBP33.02■■■□□ 2.88
LEMD2-201ENST00000293760 DCAF8L2P0C7V8 631 aa32.35■■■□□ 2.77
LEMD2-201ENST00000293760 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
LEMD2-201ENST00000293760 MYO15BQ96JP2 1530 aa31.9■■■□□ 2.7
LEMD2-201ENST00000293760 CHIC1Q5VXU3 224 aa31.84■■■□□ 2.69
LEMD2-201ENST00000293760 HRCP23327 699 aa31.74■■■□□ 2.67
LEMD2-201ENST00000293760 PCGF6Q9BYE7 350 aa31.71■■■□□ 2.67
LEMD2-201ENST00000293760 CCDC180Q9P1Z9 1646 aa31.48■■■□□ 2.63
LEMD2-201ENST00000293760 PPARGC1BQ86YN6 1023 aaKnown RBP31.43■■■□□ 2.62
LEMD2-201ENST00000293760 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
LEMD2-201ENST00000293760 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
LEMD2-201ENST00000293760 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
LEMD2-201ENST00000293760 FAM9AQ8IZU1 332 aaPredicted RBP30.68■■■□□ 2.5
LEMD2-201ENST00000293760 TRIM26Q12899 539 aaPredicted RBP30.61■■■□□ 2.49
LEMD2-201ENST00000293760 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
LEMD2-201ENST00000293760 ABCC9O60706 1549 aa30.21■■■□□ 2.43
LEMD2-201ENST00000293760 SCRIBQ14160 1630 aa30.19■■■□□ 2.42
LEMD2-201ENST00000293760 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
LEMD2-201ENST00000293760 ZEB1P37275 1124 aaPredicted RBP30.01■■■□□ 2.39
LEMD2-201ENST00000293760 RB1CC1Q8TDY2 1594 aa29.99■■■□□ 2.39
LEMD2-201ENST00000293760 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
LEMD2-201ENST00000293760 SCAF1Q9H7N4 1312 aaKnown RBP29.73■■■□□ 2.35
LEMD2-201ENST00000293760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.7■■■□□ 2.34
LEMD2-201ENST00000293760 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
LEMD2-201ENST00000293760 CCER1Q8TC90 406 aaPredicted RBP29.53■■■□□ 2.32
LEMD2-201ENST00000293760 MROH2BQ7Z745 1585 aa29.48■■■□□ 2.31
LEMD2-201ENST00000293760 WIZO95785 1651 aa29.38■■■□□ 2.29
LEMD2-201ENST00000293760 PELP1Q8IZL8 1130 aaKnown RBP29.34■■■□□ 2.29
LEMD2-201ENST00000293760 NEUROD1Q13562 356 aa29.2■■■□□ 2.27
LEMD2-201ENST00000293760 ACIN1Q9UKV3 1341 aaKnown RBP29.15■■■□□ 2.26
LEMD2-201ENST00000293760 DIEXFQ68CQ4 756 aaKnown RBP29.11■■■□□ 2.25
LEMD2-201ENST00000293760 NACADO15069 1562 aa29.1■■■□□ 2.25
LEMD2-201ENST00000293760 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
LEMD2-201ENST00000293760 UBTFP17480 764 aaKnown RBP29.06■■■□□ 2.24
LEMD2-201ENST00000293760 GTF3C3Q9Y5Q9 886 aa28.99■■■□□ 2.23
LEMD2-201ENST00000293760 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
LEMD2-201ENST00000293760 CCDC88BA6NC98 1476 aa28.99■■■□□ 2.23
LEMD2-201ENST00000293760 SOGA1O94964 1423 aa28.92■■■□□ 2.22
LEMD2-201ENST00000293760 RANGAP1P46060 587 aaPredicted RBP28.91■■■□□ 2.22
LEMD2-201ENST00000293760 EIF4G1Q04637 1599 aaKnown RBP28.9■■■□□ 2.22
LEMD2-201ENST00000293760 CEP162Q5TB80 1403 aa28.9■■■□□ 2.22
LEMD2-201ENST00000293760 YTHDC1Q96MU7 727 aaKnown RBP28.89■■■□□ 2.22
LEMD2-201ENST00000293760 CENPBP07199 599 aaPredicted RBP28.88■■■□□ 2.21
LEMD2-201ENST00000293760 HNRNPUL2Q1KMD3 747 aaKnown RBP28.82■■■□□ 2.2
LEMD2-201ENST00000293760 RUSC2Q8N2Y8 1516 aa28.8■■■□□ 2.2
LEMD2-201ENST00000293760 PABPN1Q86U42 306 aaKnown RBP eCLIP28.78■■■□□ 2.26e-9■□□□□ 10.2
LEMD2-201ENST00000293760 CSRNP3Q8WYN3 585 aa28.76■■■□□ 2.19
LEMD2-201ENST00000293760 WRNQ14191 1432 aaPredicted RBP eCLIP28.73■■■□□ 2.19
LEMD2-201ENST00000293760 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
LEMD2-201ENST00000293760 TNIKQ9UKE5 1360 aa28.66■■■□□ 2.18
LEMD2-201ENST00000293760 ZNF316A6NFI3 1004 aaPredicted RBP28.65■■■□□ 2.18
LEMD2-201ENST00000293760 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
LEMD2-201ENST00000293760 SMARCA4P51532 1647 aa28.59■■■□□ 2.17
LEMD2-201ENST00000293760 MIER1Q8N108 512 aa28.47■■■□□ 2.15
LEMD2-201ENST00000293760 GOLGA3Q08378 1498 aa28.44■■■□□ 2.14
LEMD2-201ENST00000293760 EEA1Q15075 1411 aa28.39■■■□□ 2.14
LEMD2-201ENST00000293760 APLP2Q06481 763 aa28.38■■■□□ 2.13
LEMD2-201ENST00000293760 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
LEMD2-201ENST00000293760 CLIP1P30622 1438 aa28.26■■■□□ 2.12
LEMD2-201ENST00000293760 CEP164Q9UPV0 1460 aa28.18■■■□□ 2.1
LEMD2-201ENST00000293760 SYNJ1O43426 1573 aa28.16■■■□□ 2.1
LEMD2-201ENST00000293760 VPS8Q8N3P4 1428 aa28.09■■■□□ 2.09
LEMD2-201ENST00000293760 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
LEMD2-201ENST00000293760 ITGAEP38570 1179 aa28.06■■■□□ 2.08
LEMD2-201ENST00000293760 KIF21BO75037 1637 aa28.01■■■□□ 2.08
LEMD2-201ENST00000293760 KANK4Q5T7N3 995 aaPredicted RBP27.95■■■□□ 2.06
LEMD2-201ENST00000293760 BICRAQ9NZM4 1560 aa27.89■■■□□ 2.06
LEMD2-201ENST00000293760 MYT1Q01538 1121 aa27.87■■■□□ 2.05
LEMD2-201ENST00000293760 BAZ1BQ9UIG0 1483 aaKnown RBP27.84■■■□□ 2.05
LEMD2-201ENST00000293760 DHX57Q6P158 1386 aaKnown RBP27.81■■■□□ 2.04
LEMD2-201ENST00000293760 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
LEMD2-201ENST00000293760 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
LEMD2-201ENST00000293760 SUPT16HQ9Y5B9 1047 aaKnown RBP27.69■■■□□ 2.02
LEMD2-201ENST00000293760 ARAP1Q96P48 1450 aa27.66■■■□□ 2.02
LEMD2-201ENST00000293760 KCNH8Q96L42 1107 aa27.66■■■□□ 2.02
LEMD2-201ENST00000293760 ATP1B4Q9UN42 357 aaPredicted RBP27.6■■■□□ 2.01
LEMD2-201ENST00000293760 CLSPNQ9HAW4 1339 aa27.6■■■□□ 2.01
LEMD2-201ENST00000293760 TOP2BQ02880 1626 aa27.6■■■□□ 2.01
LEMD2-201ENST00000293760 BCANQ96GW7 911 aa27.54■■■□□ 2
LEMD2-201ENST00000293760 PRXQ9BXM0 1461 aa27.52■■■□□ 2
LEMD2-201ENST00000293760 P3H3Q8IVL6 736 aa27.51■■□□□ 1.99
LEMD2-201ENST00000293760 HIRIP3Q9BW71 556 aaPredicted RBP27.51■■□□□ 1.99
LEMD2-201ENST00000293760 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
LEMD2-201ENST00000293760 FAM50AQ14320 339 aaKnown RBP27.45■■□□□ 1.98
LEMD2-201ENST00000293760 ERICH3Q5RHP9 1530 aa27.44■■□□□ 1.98
LEMD2-201ENST00000293760 SIN3AQ96ST3 1273 aa27.43■■□□□ 1.98
LEMD2-201ENST00000293760 RRBP1Q9P2E9 1410 aaKnown RBP27.43■■□□□ 1.98
LEMD2-201ENST00000293760 DDX10Q13206 875 aaKnown RBP27.41■■□□□ 1.98
LEMD2-201ENST00000293760 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
LEMD2-201ENST00000293760 TSHZ2Q9NRE2 1034 aa27.37■■□□□ 1.97
LEMD2-201ENST00000293760 KIF27Q86VH2 1401 aa27.37■■□□□ 1.97
LEMD2-201ENST00000293760 CUX1P39880 1505 aa27.36■■□□□ 1.97
LEMD2-201ENST00000293760 RAB3GAP2Q9H2M9 1393 aa27.36■■□□□ 1.97
LEMD2-201ENST00000293760 ARHGAP35Q9NRY4 1499 aa27.34■■□□□ 1.97
LEMD2-201ENST00000293760 FKBP8Q14318 412 aa27.22■■□□□ 1.95
LEMD2-201ENST00000293760 CUX2O14529 1486 aa27.21■■□□□ 1.95
LEMD2-201ENST00000293760 MAPKBP1O60336 1514 aa27.21■■□□□ 1.95
LEMD2-201ENST00000293760 TRIM52Q96A61 297 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms