RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
SLF2-201ENST00000238961 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
SLF2-201ENST00000238961 ERICH6Q7L0X2 663 aa16.49■□□□□ 0.23
SLF2-201ENST00000238961 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
SLF2-201ENST00000238961 CCER1Q8TC90 406 aaPredicted RBP16.21■□□□□ 0.19
SLF2-201ENST00000238961 FAM9AQ8IZU1 332 aaPredicted RBP16.11■□□□□ 0.17
SLF2-201ENST00000238961 APLP2Q06481 763 aa16.06■□□□□ 0.16
SLF2-201ENST00000238961 MYT1Q01538 1121 aa16.04■□□□□ 0.16
SLF2-201ENST00000238961 NISCHQ9Y2I1 1504 aa16■□□□□ 0.15
SLF2-201ENST00000238961 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
SLF2-201ENST00000238961 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
SLF2-201ENST00000238961 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
SLF2-201ENST00000238961 NEFLP07196 543 aa15.63■□□□□ 0.09
SLF2-201ENST00000238961 ATP1B4Q9UN42 357 aaPredicted RBP15.6■□□□□ 0.09
SLF2-201ENST00000238961 CENPBP07199 599 aaPredicted RBP15.57■□□□□ 0.08
SLF2-201ENST00000238961 RANGAP1P46060 587 aaPredicted RBP15.51■□□□□ 0.07
SLF2-201ENST00000238961 YTHDC1Q96MU7 727 aaKnown RBP15.46■□□□□ 0.07
SLF2-201ENST00000238961 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
SLF2-201ENST00000238961 MYT1LQ9UL68 1186 aa15.37■□□□□ 0.05
SLF2-201ENST00000238961 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
SLF2-201ENST00000238961 POLR3GLQ9BT43 218 aa15.25■□□□□ 0.03
SLF2-201ENST00000238961 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
SLF2-201ENST00000238961 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
SLF2-201ENST00000238961 ZNF316A6NFI3 1004 aaPredicted RBP15.18■□□□□ 0.02
SLF2-201ENST00000238961 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
SLF2-201ENST00000238961 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
SLF2-201ENST00000238961 RTL5Q5HYW3 569 aaPredicted RBP15.03■□□□□ -0
SLF2-201ENST00000238961 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
SLF2-201ENST00000238961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
SLF2-201ENST00000238961 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
SLF2-201ENST00000238961 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
SLF2-201ENST00000238961 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
SLF2-201ENST00000238961 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
SLF2-201ENST00000238961 BCL11AQ9H165 835 aa14.86□□□□□ -0.03
SLF2-201ENST00000238961 ITGAEP38570 1179 aa14.72□□□□□ -0.05
SLF2-201ENST00000238961 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
SLF2-201ENST00000238961 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
SLF2-201ENST00000238961 CDK11BP21127 795 aaKnown RBP14.53□□□□□ -0.08
SLF2-201ENST00000238961 CDK11AQ9UQ88 783 aaPredicted RBP14.53□□□□□ -0.08
SLF2-201ENST00000238961 BCANQ96GW7 911 aa14.53□□□□□ -0.08
SLF2-201ENST00000238961 CANXP27824 592 aaKnown RBP14.51□□□□□ -0.09
SLF2-201ENST00000238961 EIF5BO60841 1220 aaKnown RBP14.45□□□□□ -0.1
SLF2-201ENST00000238961 ANP32BQ92688 251 aaKnown RBP14.45□□□□□ -0.1
SLF2-201ENST00000238961 NEFMP07197 916 aa14.44□□□□□ -0.1
SLF2-201ENST00000238961 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.12
SLF2-201ENST00000238961 GLIPR1L2Q4G1C9 344 aa14.28□□□□□ -0.12
SLF2-201ENST00000238961 TULP1O00294 542 aaPredicted RBP14.26□□□□□ -0.13
SLF2-201ENST00000238961 TRIM52Q96A61 297 aa14.26□□□□□ -0.13
SLF2-201ENST00000238961 ZNF326Q5BKZ1 582 aaKnown RBP14.26□□□□□ -0.13
SLF2-201ENST00000238961 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
SLF2-201ENST00000238961 A0A0G2JS52 829 aa14.23□□□□□ -0.13
SLF2-201ENST00000238961 ABCC9O60706 1549 aa14.22□□□□□ -0.13
SLF2-201ENST00000238961 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.13
SLF2-201ENST00000238961 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
SLF2-201ENST00000238961 ANP32AP39687 249 aaKnown RBP14.15□□□□□ -0.14
SLF2-201ENST00000238961 FAM50AQ14320 339 aaKnown RBP14.13□□□□□ -0.15
SLF2-201ENST00000238961 ARXQ96QS3 562 aa14.11□□□□□ -0.15
SLF2-201ENST00000238961 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
SLF2-201ENST00000238961 NEUROD1Q13562 356 aa14.1□□□□□ -0.15
SLF2-201ENST00000238961 HRCP23327 699 aa14.08□□□□□ -0.16
SLF2-201ENST00000238961 ESF1Q9H501 851 aaKnown RBP14.07□□□□□ -0.16
SLF2-201ENST00000238961 UPF2Q9HAU5 1272 aaKnown RBP14.06□□□□□ -0.16
SLF2-201ENST00000238961 ANP32CO43423 234 aa14.04□□□□□ -0.16
SLF2-201ENST00000238961 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
SLF2-201ENST00000238961 TRIM26Q12899 539 aaPredicted RBP14.02□□□□□ -0.16
SLF2-201ENST00000238961 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
SLF2-201ENST00000238961 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
SLF2-201ENST00000238961 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
SLF2-201ENST00000238961 PLEKHG5O94827 1062 aa13.9□□□□□ -0.18
SLF2-201ENST00000238961 PRM3Q9NNZ6 103 aa13.9□□□□□ -0.18
SLF2-201ENST00000238961 FBLN2P98095 1184 aa13.89□□□□□ -0.19
SLF2-201ENST00000238961 CLSTN1O94985 981 aa13.88□□□□□ -0.19
SLF2-201ENST00000238961 ZBTB7CA1YPR0 619 aa13.87□□□□□ -0.19
SLF2-201ENST00000238961 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
SLF2-201ENST00000238961 ZRSR1Q15695 479 aaKnown RBP13.87□□□□□ -0.19
SLF2-201ENST00000238961 TRIM44Q96DX7 344 aaPredicted RBP13.86□□□□□ -0.19
SLF2-201ENST00000238961 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
SLF2-201ENST00000238961 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
SLF2-201ENST00000238961 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
SLF2-201ENST00000238961 NBR1Q14596 966 aa13.79□□□□□ -0.2
SLF2-201ENST00000238961 NPHP1O15259 732 aa13.78□□□□□ -0.2
SLF2-201ENST00000238961 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.2
SLF2-201ENST00000238961 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.21
SLF2-201ENST00000238961 GTF3C3Q9Y5Q9 886 aa13.77□□□□□ -0.21
SLF2-201ENST00000238961 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
SLF2-201ENST00000238961 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
SLF2-201ENST00000238961 SALL2Q9Y467 1007 aaPredicted RBP13.75□□□□□ -0.21
SLF2-201ENST00000238961 C14orf37Q86TY3 774 aa13.75□□□□□ -0.21
SLF2-201ENST00000238961 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.75□□□□□ -0.21
SLF2-201ENST00000238961 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
SLF2-201ENST00000238961 KRI1Q8N9T8 703 aaKnown RBP13.71□□□□□ -0.21
SLF2-201ENST00000238961 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
SLF2-201ENST00000238961 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
SLF2-201ENST00000238961 GOLGA6L22H0YM25 854 aa13.63□□□□□ -0.23
SLF2-201ENST00000238961 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
SLF2-201ENST00000238961 ISY1Q9ULR0 285 aaKnown RBP13.6□□□□□ -0.23
SLF2-201ENST00000238961 GOLGA6L6A8MZA4 724 aa13.6□□□□□ -0.23
SLF2-201ENST00000238961 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
SLF2-201ENST00000238961 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
SLF2-201ENST00000238961 SENP3Q9H4L4 574 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms