RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 NISCHQ9Y2I1 1504 aa51.35■■■■■ 5.81
CROCCP2-201ENST00000362058 CCDC180Q9P1Z9 1646 aa44.08■■■■■ 4.65
CROCCP2-201ENST00000362058 ZCCHC6Q5VYS8 1495 aaKnown RBP43.4■■■■■ 4.54
CROCCP2-201ENST00000362058 SHROOM4Q9ULL8 1493 aa43.08■■■■■ 4.49
CROCCP2-201ENST00000362058 DCAF1Q9Y4B6 1507 aa42.37■■■■■ 4.37
CROCCP2-201ENST00000362058 DCAF8L2P0C7V8 631 aa42.18■■■■■ 4.34
CROCCP2-201ENST00000362058 SUPT5HO00267 1087 aaKnown RBP42.15■■■■■ 4.34
CROCCP2-201ENST00000362058 MYO15BQ96JP2 1530 aa41.31■■■■■ 4.2
CROCCP2-201ENST00000362058 CHIC1Q5VXU3 224 aa41■■■■■ 4.15
CROCCP2-201ENST00000362058 ABCC9O60706 1549 aa40.93■■■■■ 4.14
CROCCP2-201ENST00000362058 SCRIBQ14160 1630 aa40.88■■■■■ 4.13
CROCCP2-201ENST00000362058 NACADO15069 1562 aa40.73■■■■■ 4.11
CROCCP2-201ENST00000362058 RSF1Q96T23 1441 aaPredicted RBP40.4■■■■■ 4.06
CROCCP2-201ENST00000362058 RB1CC1Q8TDY2 1594 aa40.08■■■■■ 4.01
CROCCP2-201ENST00000362058 CECR2Q9BXF3 1484 aa39.85■■■■□ 3.97
CROCCP2-201ENST00000362058 MROH2BQ7Z745 1585 aa39.77■■■■□ 3.96
CROCCP2-201ENST00000362058 WIZO95785 1651 aa39.58■■■■□ 3.93
CROCCP2-201ENST00000362058 LOC105371045A0A1W2PR82 267 aa39.57■■■■□ 3.92
CROCCP2-201ENST00000362058 BAZ1AQ9NRL2 1556 aaPredicted RBP39.54■■■■□ 3.92
CROCCP2-201ENST00000362058 TRIM41Q8WV44 630 aa39.47■■■■□ 3.91
CROCCP2-201ENST00000362058 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
CROCCP2-201ENST00000362058 PCGF6Q9BYE7 350 aa39.29■■■■□ 3.88
CROCCP2-201ENST00000362058 HRCP23327 699 aa39.25■■■■□ 3.87
CROCCP2-201ENST00000362058 SMARCA4P51532 1647 aa39.21■■■■□ 3.87
CROCCP2-201ENST00000362058 TOP2AP11388 1531 aaKnown RBP39.11■■■■□ 3.85
CROCCP2-201ENST00000362058 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
CROCCP2-201ENST00000362058 FAM9AQ8IZU1 332 aaPredicted RBP38.87■■■■□ 3.81
CROCCP2-201ENST00000362058 BICRAQ9NZM4 1560 aa38.86■■■■□ 3.81
CROCCP2-201ENST00000362058 TRIM26Q12899 539 aaPredicted RBP38.85■■■■□ 3.81
CROCCP2-201ENST00000362058 SMARCA2P51531 1590 aa38.81■■■■□ 3.8
CROCCP2-201ENST00000362058 CCDC88BA6NC98 1476 aa38.77■■■■□ 3.8
CROCCP2-201ENST00000362058 PEG3Q9GZU2 1588 aa38.58■■■■□ 3.77
CROCCP2-201ENST00000362058 PABPN1Q86U42 306 aaKnown RBP eCLIP38.58■■■■□ 3.77
CROCCP2-201ENST00000362058 ABCC8Q09428 1581 aa38.48■■■■□ 3.75
CROCCP2-201ENST00000362058 EHMT2Q96KQ7 1210 aa38.35■■■■□ 3.73
CROCCP2-201ENST00000362058 ATAD2BQ9ULI0 1458 aa38.19■■■■□ 3.7
CROCCP2-201ENST00000362058 PPARGC1BQ86YN6 1023 aaKnown RBP38.17■■■■□ 3.7
CROCCP2-201ENST00000362058 EEA1Q15075 1411 aa38.16■■■■□ 3.7
CROCCP2-201ENST00000362058 BAZ1BQ9UIG0 1483 aaKnown RBP38.09■■■■□ 3.69
CROCCP2-201ENST00000362058 ZEB1P37275 1124 aaPredicted RBP38.04■■■■□ 3.68
CROCCP2-201ENST00000362058 SOGA1O94964 1423 aa38.03■■■■□ 3.68
CROCCP2-201ENST00000362058 WRNQ14191 1432 aaPredicted RBP eCLIP38■■■■□ 3.67
CROCCP2-201ENST00000362058 TNIKQ9UKE5 1360 aa37.89■■■■□ 3.66
CROCCP2-201ENST00000362058 CSRNP3Q8WYN3 585 aa37.88■■■■□ 3.65
CROCCP2-201ENST00000362058 CEP162Q5TB80 1403 aa37.83■■■■□ 3.65
CROCCP2-201ENST00000362058 SYNJ1O43426 1573 aa37.81■■■■□ 3.64
CROCCP2-201ENST00000362058 RUSC2Q8N2Y8 1516 aa37.81■■■■□ 3.64
CROCCP2-201ENST00000362058 GOLGA3Q08378 1498 aa37.75■■■■□ 3.63
CROCCP2-201ENST00000362058 HMGXB3Q12766 1538 aa37.65■■■■□ 3.62
CROCCP2-201ENST00000362058 KIF21BO75037 1637 aa37.62■■■■□ 3.61
CROCCP2-201ENST00000362058 UBTFP17480 764 aaKnown RBP37.6■■■■□ 3.61
CROCCP2-201ENST00000362058 CEP164Q9UPV0 1460 aa37.59■■■■□ 3.61
CROCCP2-201ENST00000362058 NCAPD3P42695 1498 aa37.58■■■■□ 3.61
CROCCP2-201ENST00000362058 TOP2BQ02880 1626 aa37.52■■■■□ 3.6
CROCCP2-201ENST00000362058 BIVM-ERCC5R4GMW8 1640 aa37.46■■■■□ 3.59
CROCCP2-201ENST00000362058 CLIP1P30622 1438 aa37.22■■■■□ 3.55
CROCCP2-201ENST00000362058 RAPGEF2Q9Y4G8 1499 aa37.18■■■■□ 3.54
CROCCP2-201ENST00000362058 CFTRP13569 1480 aa37.16■■■■□ 3.54
CROCCP2-201ENST00000362058 CCER1Q8TC90 406 aaPredicted RBP37.14■■■■□ 3.54
CROCCP2-201ENST00000362058 PRDM2Q13029 1718 aa37.14■■■■□ 3.54
CROCCP2-201ENST00000362058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.12■■■■□ 3.53
CROCCP2-201ENST00000362058 TTBK1Q5TCY1 1321 aaPredicted RBP37.1■■■■□ 3.53
CROCCP2-201ENST00000362058 CUX1P39880 1505 aa37.09■■■■□ 3.53
CROCCP2-201ENST00000362058 ERICH3Q5RHP9 1530 aa37.09■■■■□ 3.53
CROCCP2-201ENST00000362058 VPS8Q8N3P4 1428 aa37.07■■■■□ 3.52
CROCCP2-201ENST00000362058 PRXQ9BXM0 1461 aa36.98■■■■□ 3.51
CROCCP2-201ENST00000362058 KIF27Q86VH2 1401 aa36.91■■■■□ 3.5
CROCCP2-201ENST00000362058 APLP2Q06481 763 aa36.84■■■■□ 3.49
CROCCP2-201ENST00000362058 CADPSQ9ULU8 1353 aa36.76■■■■□ 3.47
CROCCP2-201ENST00000362058 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
CROCCP2-201ENST00000362058 RANGAP1P46060 587 aaPredicted RBP36.65■■■■□ 3.46
CROCCP2-201ENST00000362058 ARAP1Q96P48 1450 aa36.64■■■■□ 3.46
CROCCP2-201ENST00000362058 CUX2O14529 1486 aa36.53■■■■□ 3.44
CROCCP2-201ENST00000362058 HNRNPUL2Q1KMD3 747 aaKnown RBP36.48■■■■□ 3.43
CROCCP2-201ENST00000362058 FGD5Q6ZNL6 1462 aa36.48■■■■□ 3.43
CROCCP2-201ENST00000362058 IGF1RP08069 1367 aa36.43■■■■□ 3.42
CROCCP2-201ENST00000362058 FANCD2Q9BXW9 1451 aa36.39■■■■□ 3.42
CROCCP2-201ENST00000362058 ARHGAP35Q9NRY4 1499 aa36.38■■■■□ 3.41
CROCCP2-201ENST00000362058 DNMBPQ6XZF7 1577 aa36.3■■■■□ 3.4
CROCCP2-201ENST00000362058 CARMIL1Q5VZK9 1371 aa36.3■■■■□ 3.4
CROCCP2-201ENST00000362058 DIEXFQ68CQ4 756 aaKnown RBP36.25■■■■□ 3.39
CROCCP2-201ENST00000362058 KANK4Q5T7N3 995 aaPredicted RBP36.22■■■■□ 3.39
CROCCP2-201ENST00000362058 RRBP1Q9P2E9 1410 aaKnown RBP36.18■■■■□ 3.38
CROCCP2-201ENST00000362058 TOPBP1Q92547 1522 aa36.15■■■■□ 3.38
CROCCP2-201ENST00000362058 ABCA10Q8WWZ4 1543 aa36.14■■■■□ 3.38
CROCCP2-201ENST00000362058 ZNF316A6NFI3 1004 aaPredicted RBP36.14■■■■□ 3.38
CROCCP2-201ENST00000362058 MAP3K1Q13233 1512 aa36.13■■■■□ 3.37
CROCCP2-201ENST00000362058 LAMC3Q9Y6N6 1575 aa36.1■■■■□ 3.37
CROCCP2-201ENST00000362058 POLA1P09884 1462 aaPredicted RBP36.08■■■■□ 3.37
CROCCP2-201ENST00000362058 CLSPNQ9HAW4 1339 aa36.07■■■■□ 3.36
CROCCP2-201ENST00000362058 NESP48681 1621 aa36.06■■■■□ 3.36
CROCCP2-201ENST00000362058 TIAM1Q13009 1591 aa36.04■■■■□ 3.36
CROCCP2-201ENST00000362058 CUL7Q14999 1698 aa36.04■■■■□ 3.36
CROCCP2-201ENST00000362058 RAD54L2Q9Y4B4 1467 aa36.02■■■■□ 3.36
CROCCP2-201ENST00000362058 CCNB3Q8WWL7 1395 aa35.98■■■■□ 3.35
CROCCP2-201ENST00000362058 FHAD1B1AJZ9 1412 aa35.98■■■■□ 3.35
CROCCP2-201ENST00000362058 WDR97A6NE52 1622 aa35.92■■■■□ 3.34
CROCCP2-201ENST00000362058 DHX57Q6P158 1386 aaKnown RBP35.92■■■■□ 3.34
CROCCP2-201ENST00000362058 CTTNBP2Q8WZ74 1663 aa35.9■■■■□ 3.34
CROCCP2-201ENST00000362058 EFCAB5A4FU69 1503 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms