RNA–Protein interactions for RNA: ENST00000435708.5

DVL3-204, Transcript of dishevelled segment polarity protein 3, humanhuman

TSL 5

Gene DVL3, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DVL3-204ENST00000435708 NISCHQ9Y2I1 1504 aa55.47■■■■■ 6.47
DVL3-204ENST00000435708 CCDC180Q9P1Z9 1646 aa49.42■■■■■ 5.5
DVL3-204ENST00000435708 ABCC9O60706 1549 aa48.25■■■■■ 5.31
DVL3-204ENST00000435708 RB1CC1Q8TDY2 1594 aa46.47■■■■■ 5.03
DVL3-204ENST00000435708 NACADO15069 1562 aa46.4■■■■■ 5.02
DVL3-204ENST00000435708 DCAF8L2P0C7V8 631 aa46.23■■■■■ 4.99
DVL3-204ENST00000435708 ZCCHC6Q5VYS8 1495 aaKnown RBP46.22■■■■■ 4.99
DVL3-204ENST00000435708 MYO15BQ96JP2 1530 aa46.13■■■■■ 4.97
DVL3-204ENST00000435708 DCAF1Q9Y4B6 1507 aa45.93■■■■■ 4.94
DVL3-204ENST00000435708 UNC13AQ9UPW8 1703 aa45.52■■■■■ 4.88
DVL3-204ENST00000435708 BICRAQ9NZM4 1560 aa45.07■■■■■ 4.8
DVL3-204ENST00000435708 PABPN1Q86U42 306 aaKnown RBP eCLIP45.03■■■■■ 4.83e-9■■□□□ 13.3
DVL3-204ENST00000435708 SCRIBQ14160 1630 aa45.03■■■■■ 4.8
DVL3-204ENST00000435708 DNAJC5BQ9UF47 199 aa44.77■■■■■ 4.76
DVL3-204ENST00000435708 SHROOM4Q9ULL8 1493 aa44.59■■■■■ 4.73
DVL3-204ENST00000435708 EIF4G1Q04637 1599 aaKnown RBP43.87■■■■■ 4.61
DVL3-204ENST00000435708 CC2D2AQ9P2K1 1620 aa43.7■■■■■ 4.59
DVL3-204ENST00000435708 CECR2Q9BXF3 1484 aa43.36■■■■■ 4.53
DVL3-204ENST00000435708 SMARCA4P51532 1647 aa43.08■■■■■ 4.49
DVL3-204ENST00000435708 BAZ1AQ9NRL2 1556 aaPredicted RBP43.01■■■■■ 4.48
DVL3-204ENST00000435708 ATAD2BQ9ULI0 1458 aa42.81■■■■■ 4.44
DVL3-204ENST00000435708 SMARCA2P51531 1590 aa42.78■■■■■ 4.44
DVL3-204ENST00000435708 NCAPD3P42695 1498 aa42.78■■■■■ 4.44
DVL3-204ENST00000435708 MROH2BQ7Z745 1585 aa42.74■■■■■ 4.43
DVL3-204ENST00000435708 PEG3Q9GZU2 1588 aa42.67■■■■■ 4.42
DVL3-204ENST00000435708 HMGXB3Q12766 1538 aa42.61■■■■■ 4.41
DVL3-204ENST00000435708 BAZ1BQ9UIG0 1483 aaKnown RBP42.46■■■■■ 4.39
DVL3-204ENST00000435708 WIZO95785 1651 aa42.32■■■■■ 4.37
DVL3-204ENST00000435708 RSF1Q96T23 1441 aaPredicted RBP42.22■■■■■ 4.35
DVL3-204ENST00000435708 TOP2AP11388 1531 aaKnown RBP41.86■■■■■ 4.29
DVL3-204ENST00000435708 NESP48681 1621 aa41.76■■■■■ 4.28
DVL3-204ENST00000435708 LAMC3Q9Y6N6 1575 aa41.7■■■■■ 4.27
DVL3-204ENST00000435708 ERCC6Q03468 1493 aa41.59■■■■■ 4.25
DVL3-204ENST00000435708 CADPSQ9ULU8 1353 aa41.5■■■■■ 4.23
DVL3-204ENST00000435708 PDS5BQ9NTI5 1447 aa41.36■■■■■ 4.21
DVL3-204ENST00000435708 KIF21AQ7Z4S6 1674 aa41.36■■■■■ 4.21
DVL3-204ENST00000435708 CCDC88BA6NC98 1476 aa41.33■■■■■ 4.21
DVL3-204ENST00000435708 CFTRP13569 1480 aa41.28■■■■■ 4.2
DVL3-204ENST00000435708 CUX2O14529 1486 aa41.21■■■■■ 4.19
DVL3-204ENST00000435708 THOC2Q8NI27 1593 aaKnown RBP41.2■■■■■ 4.19
DVL3-204ENST00000435708 PRDM2Q13029 1718 aa41.13■■■■■ 4.18
DVL3-204ENST00000435708 SUPT5HO00267 1087 aaKnown RBP41.07■■■■■ 4.17
DVL3-204ENST00000435708 FANCD2Q9BXW9 1451 aa41.06■■■■■ 4.16
DVL3-204ENST00000435708 CEP164Q9UPV0 1460 aa41.02■■■■■ 4.16
DVL3-204ENST00000435708 MRC2Q9UBG0 1479 aa40.97■■■■■ 4.15
DVL3-204ENST00000435708 WDR62O43379 1518 aa40.86■■■■■ 4.13
DVL3-204ENST00000435708 DNAJC5Q9H3Z4 198 aa40.67■■■■■ 4.1
DVL3-204ENST00000435708 URB2Q14146 1524 aaKnown RBP40.67■■■■■ 4.1
DVL3-204ENST00000435708 TOPBP1Q92547 1522 aa40.42■■■■■ 4.06
DVL3-204ENST00000435708 ABCC8Q09428 1581 aa40.41■■■■■ 4.06
DVL3-204ENST00000435708 DNMBPQ6XZF7 1577 aa40.4■■■■■ 4.06
DVL3-204ENST00000435708 IFT140Q96RY7 1462 aa40.16■■■■■ 4.02
DVL3-204ENST00000435708 CUX1P39880 1505 aa40.11■■■■■ 4.01
DVL3-204ENST00000435708 POLA1P09884 1462 aaPredicted RBP40.07■■■■■ 4
DVL3-204ENST00000435708 TARBP1Q13395 1621 aaKnown RBP40.02■■■■■ 4
DVL3-204ENST00000435708 FGD5Q6ZNL6 1462 aa39.97■■■■□ 3.99
DVL3-204ENST00000435708 ZNF608Q9ULD9 1512 aaPredicted RBP39.96■■■■□ 3.99
DVL3-204ENST00000435708 SOGA1O94964 1423 aa39.87■■■■□ 3.97
DVL3-204ENST00000435708 EIF4G3O43432 1585 aaKnown RBP39.87■■■■□ 3.97
DVL3-204ENST00000435708 RAD54L2Q9Y4B4 1467 aa39.87■■■■□ 3.97
DVL3-204ENST00000435708 WRNQ14191 1432 aaPredicted RBP eCLIP39.82■■■■□ 3.96
DVL3-204ENST00000435708 BIVM-ERCC5R4GMW8 1640 aa39.81■■■■□ 3.96
DVL3-204ENST00000435708 TOP2BQ02880 1626 aa39.79■■■■□ 3.96
DVL3-204ENST00000435708 SYNJ1O43426 1573 aa39.77■■■■□ 3.96
DVL3-204ENST00000435708 WDR97A6NE52 1622 aa39.73■■■■□ 3.95
DVL3-204ENST00000435708 AQRO60306 1485 aaKnown RBP eCLIP39.72■■■■□ 3.953e-7■■■■□ 20.9
DVL3-204ENST00000435708 TDRD9Q8NDG6 1382 aaKnown RBP39.63■■■■□ 3.93
DVL3-204ENST00000435708 ABCA10Q8WWZ4 1543 aa39.59■■■■□ 3.93
DVL3-204ENST00000435708 ABCA5Q8WWZ7 1642 aa39.48■■■■□ 3.91
DVL3-204ENST00000435708 PBRM1Q86U86 1689 aa39.45■■■■□ 3.91
DVL3-204ENST00000435708 GRIN2BQ13224 1484 aa39.43■■■■□ 3.9
DVL3-204ENST00000435708 GAPVD1Q14C86 1478 aa39.43■■■■□ 3.9
DVL3-204ENST00000435708 CHD1O14646 1710 aa39.41■■■■□ 3.9
DVL3-204ENST00000435708 OSCARQ8IYS5 282 aa39.41■■■■□ 3.9
DVL3-204ENST00000435708 SNAPC4Q5SXM2 1469 aa39.38■■■■□ 3.9
DVL3-204ENST00000435708 MAGI1Q96QZ7 1491 aaPredicted RBP39.35■■■■□ 3.89
DVL3-204ENST00000435708 FBLN2P98095 1184 aa39.2■■■■□ 3.87
DVL3-204ENST00000435708 SYNJ2O15056 1496 aa39.18■■■■□ 3.86
DVL3-204ENST00000435708 ERICH3Q5RHP9 1530 aa39.13■■■■□ 3.85
DVL3-204ENST00000435708 TRIM41Q8WV44 630 aa39.12■■■■□ 3.85
DVL3-204ENST00000435708 CHMP7Q8WUX9 453 aaPredicted RBP39.1■■■■□ 3.85
DVL3-204ENST00000435708 ADAMTS12P58397 1594 aa39.09■■■■□ 3.85
DVL3-204ENST00000435708 KIF27Q86VH2 1401 aa38.98■■■■□ 3.83
DVL3-204ENST00000435708 FHAD1B1AJZ9 1412 aa38.97■■■■□ 3.83
DVL3-204ENST00000435708 RIMBP3CA6NJZ7 1639 aa38.95■■■■□ 3.83
DVL3-204ENST00000435708 RIMBP3BA6NNM3 1639 aa38.95■■■■□ 3.83
DVL3-204ENST00000435708 RIMBP3Q9UFD9 1639 aa38.95■■■■□ 3.83
DVL3-204ENST00000435708 CLASP1Q7Z460 1538 aa38.94■■■■□ 3.82
DVL3-204ENST00000435708 GRIN2AQ12879 1464 aa38.93■■■■□ 3.82
DVL3-204ENST00000435708 ARHGEF11O15085 1522 aa38.84■■■■□ 3.81
DVL3-204ENST00000435708 IGF1RP08069 1367 aa38.81■■■■□ 3.8
DVL3-204ENST00000435708 CUL7Q14999 1698 aa38.81■■■■□ 3.8
DVL3-204ENST00000435708 CEP170Q5SW79 1584 aa38.77■■■■□ 3.8
DVL3-204ENST00000435708 NUP160Q12769 1436 aa38.76■■■■□ 3.8
DVL3-204ENST00000435708 RUSC2Q8N2Y8 1516 aa38.63■■■■□ 3.77
DVL3-204ENST00000435708 CARMIL1Q5VZK9 1371 aa38.57■■■■□ 3.77
DVL3-204ENST00000435708 SHROOM2Q13796 1616 aa38.53■■■■□ 3.76
DVL3-204ENST00000435708 ARAP1Q96P48 1450 aa38.53■■■■□ 3.76
DVL3-204ENST00000435708 CYB5RLQ6IPT4 315 aa38.47■■■■□ 3.75
DVL3-204ENST00000435708 RAPGEF2Q9Y4G8 1499 aa38.38■■■■□ 3.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms