RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-222ENST00000575009 NISCHQ9Y2I1 1504 aa64.08■■■■■ 7.85
SRRM2-222ENST00000575009 CCDC180Q9P1Z9 1646 aa57.06■■■■■ 6.72
SRRM2-222ENST00000575009 ABCC9O60706 1549 aa56.12■■■■■ 6.57
SRRM2-222ENST00000575009 RB1CC1Q8TDY2 1594 aa53.78■■■■■ 6.2
SRRM2-222ENST00000575009 DCAF8L2P0C7V8 631 aa53.65■■■■■ 6.18
SRRM2-222ENST00000575009 NACADO15069 1562 aa53.65■■■■■ 6.18
SRRM2-222ENST00000575009 ZCCHC6Q5VYS8 1495 aaKnown RBP53.33■■■■■ 6.13
SRRM2-222ENST00000575009 MYO15BQ96JP2 1530 aa53.19■■■■■ 6.11
SRRM2-222ENST00000575009 DCAF1Q9Y4B6 1507 aa52.91■■■■■ 6.06
SRRM2-222ENST00000575009 UNC13AQ9UPW8 1703 aa52.74■■■■■ 6.03
SRRM2-222ENST00000575009 PABPN1Q86U42 306 aaKnown RBP eCLIP52.39■■■■■ 5.98
SRRM2-222ENST00000575009 BICRAQ9NZM4 1560 aa52.26■■■■■ 5.96
SRRM2-222ENST00000575009 SCRIBQ14160 1630 aa52.15■■■■■ 5.94
SRRM2-222ENST00000575009 DNAJC5BQ9UF47 199 aa51.7■■■■■ 5.87
SRRM2-222ENST00000575009 SHROOM4Q9ULL8 1493 aa51.48■■■■■ 5.83
SRRM2-222ENST00000575009 EIF4G1Q04637 1599 aaKnown RBP50.86■■■■■ 5.73
SRRM2-222ENST00000575009 CC2D2AQ9P2K1 1620 aa50.73■■■■■ 5.71
SRRM2-222ENST00000575009 CECR2Q9BXF3 1484 aa50.38■■■■■ 5.66
SRRM2-222ENST00000575009 SMARCA4P51532 1647 aa49.81■■■■■ 5.56
SRRM2-222ENST00000575009 BAZ1AQ9NRL2 1556 aaPredicted RBP49.65■■■■■ 5.54
SRRM2-222ENST00000575009 ATAD2BQ9ULI0 1458 aa49.55■■■■■ 5.52
SRRM2-222ENST00000575009 NCAPD3P42695 1498 aa49.5■■■■■ 5.51
SRRM2-222ENST00000575009 MROH2BQ7Z745 1585 aa49.44■■■■■ 5.5
SRRM2-222ENST00000575009 SMARCA2P51531 1590 aa49.43■■■■■ 5.5
SRRM2-222ENST00000575009 HMGXB3Q12766 1538 aa49.26■■■■■ 5.48
SRRM2-222ENST00000575009 PEG3Q9GZU2 1588 aa49.25■■■■■ 5.47
SRRM2-222ENST00000575009 BAZ1BQ9UIG0 1483 aaKnown RBP49.12■■■■■ 5.45
SRRM2-222ENST00000575009 WIZO95785 1651 aa48.94■■■■■ 5.42
SRRM2-222ENST00000575009 RSF1Q96T23 1441 aaPredicted RBP48.75■■■■■ 5.39
SRRM2-222ENST00000575009 NESP48681 1621 aa48.52■■■■■ 5.36
SRRM2-222ENST00000575009 TOP2AP11388 1531 aaKnown RBP48.32■■■■■ 5.33
SRRM2-222ENST00000575009 ERCC6Q03468 1493 aa48.31■■■■■ 5.32
SRRM2-222ENST00000575009 LAMC3Q9Y6N6 1575 aa48.26■■■■■ 5.32
SRRM2-222ENST00000575009 CADPSQ9ULU8 1353 aa48.05■■■■■ 5.28
SRRM2-222ENST00000575009 KIF21AQ7Z4S6 1674 aa47.97■■■■■ 5.27
SRRM2-222ENST00000575009 PDS5BQ9NTI5 1447 aa47.89■■■■■ 5.26
SRRM2-222ENST00000575009 CUX2O14529 1486 aa47.82■■■■■ 5.25
SRRM2-222ENST00000575009 THOC2Q8NI27 1593 aaKnown RBP47.81■■■■■ 5.24
SRRM2-222ENST00000575009 CCDC88BA6NC98 1476 aa47.77■■■■■ 5.24
SRRM2-222ENST00000575009 CFTRP13569 1480 aa47.74■■■■■ 5.23
SRRM2-222ENST00000575009 FANCD2Q9BXW9 1451 aa47.55■■■■■ 5.2
SRRM2-222ENST00000575009 CEP164Q9UPV0 1460 aa47.5■■■■■ 5.19
SRRM2-222ENST00000575009 MRC2Q9UBG0 1479 aa47.48■■■■■ 5.19
SRRM2-222ENST00000575009 PRDM2Q13029 1718 aa47.46■■■■■ 5.19
SRRM2-222ENST00000575009 SUPT5HO00267 1087 aaKnown RBP47.39■■■■■ 5.18
SRRM2-222ENST00000575009 WDR62O43379 1518 aa47.34■■■■■ 5.17
SRRM2-222ENST00000575009 URB2Q14146 1524 aaKnown RBP47.14■■■■■ 5.14
SRRM2-222ENST00000575009 TOPBP1Q92547 1522 aa46.79■■■■■ 5.08
SRRM2-222ENST00000575009 DNMBPQ6XZF7 1577 aa46.7■■■■■ 5.07
SRRM2-222ENST00000575009 ABCC8Q09428 1581 aa46.64■■■■■ 5.06
SRRM2-222ENST00000575009 DNAJC5Q9H3Z4 198 aa46.61■■■■■ 5.05
SRRM2-222ENST00000575009 IFT140Q96RY7 1462 aa46.48■■■■■ 5.03
SRRM2-222ENST00000575009 CUX1P39880 1505 aa46.39■■■■■ 5.02
SRRM2-222ENST00000575009 ZNF608Q9ULD9 1512 aaPredicted RBP46.39■■■■■ 5.02
SRRM2-222ENST00000575009 POLA1P09884 1462 aaPredicted RBP46.38■■■■■ 5.01
SRRM2-222ENST00000575009 TARBP1Q13395 1621 aaKnown RBP46.32■■■■■ 5
SRRM2-222ENST00000575009 FGD5Q6ZNL6 1462 aa46.25■■■■■ 4.99
SRRM2-222ENST00000575009 RAD54L2Q9Y4B4 1467 aa46.22■■■■■ 4.99
SRRM2-222ENST00000575009 EIF4G3O43432 1585 aaKnown RBP46.21■■■■■ 4.99
SRRM2-222ENST00000575009 SOGA1O94964 1423 aa46.14■■■■■ 4.98
SRRM2-222ENST00000575009 AQRO60306 1485 aaKnown RBP eCLIP46.08■■■■■ 4.976e-9■■■■□ 24.4
SRRM2-222ENST00000575009 TDRD9Q8NDG6 1382 aaKnown RBP45.96■■■■■ 4.95
SRRM2-222ENST00000575009 WRNQ14191 1432 aaPredicted RBP eCLIP45.94■■■■■ 4.95
SRRM2-222ENST00000575009 SYNJ1O43426 1573 aa45.94■■■■■ 4.94
SRRM2-222ENST00000575009 WDR97A6NE52 1622 aa45.92■■■■■ 4.94
SRRM2-222ENST00000575009 BIVM-ERCC5R4GMW8 1640 aa45.92■■■■■ 4.94
SRRM2-222ENST00000575009 TOP2BQ02880 1626 aa45.89■■■■■ 4.94
SRRM2-222ENST00000575009 OSCARQ8IYS5 282 aa45.79■■■■■ 4.92
SRRM2-222ENST00000575009 ABCA10Q8WWZ4 1543 aa45.73■■■■■ 4.91
SRRM2-222ENST00000575009 CHD1O14646 1710 aa45.71■■■■■ 4.91
SRRM2-222ENST00000575009 SNAPC4Q5SXM2 1469 aa45.65■■■■■ 4.9
SRRM2-222ENST00000575009 ABCA5Q8WWZ7 1642 aa45.63■■■■■ 4.9
SRRM2-222ENST00000575009 PBRM1Q86U86 1689 aa45.63■■■■■ 4.89
SRRM2-222ENST00000575009 GRIN2BQ13224 1484 aa45.61■■■■■ 4.89
SRRM2-222ENST00000575009 GAPVD1Q14C86 1478 aa45.61■■■■■ 4.89
SRRM2-222ENST00000575009 FBLN2P98095 1184 aa45.55■■■■■ 4.88
SRRM2-222ENST00000575009 MAGI1Q96QZ7 1491 aaPredicted RBP45.5■■■■■ 4.87
SRRM2-222ENST00000575009 SYNJ2O15056 1496 aa45.35■■■■■ 4.85
SRRM2-222ENST00000575009 CHMP7Q8WUX9 453 aaPredicted RBP45.33■■■■■ 4.85
SRRM2-222ENST00000575009 ADAMTS12P58397 1594 aa45.22■■■■■ 4.83
SRRM2-222ENST00000575009 RIMBP3CA6NJZ7 1639 aa45.22■■■■■ 4.83
SRRM2-222ENST00000575009 RIMBP3BA6NNM3 1639 aa45.22■■■■■ 4.83
SRRM2-222ENST00000575009 RIMBP3Q9UFD9 1639 aa45.22■■■■■ 4.83
SRRM2-222ENST00000575009 ERICH3Q5RHP9 1530 aa45.16■■■■■ 4.82
SRRM2-222ENST00000575009 ARHGEF11O15085 1522 aa45.15■■■■■ 4.82
SRRM2-222ENST00000575009 CLASP1Q7Z460 1538 aa45.13■■■■■ 4.82
SRRM2-222ENST00000575009 TRIM41Q8WV44 630 aa45.1■■■■■ 4.81
SRRM2-222ENST00000575009 GRIN2AQ12879 1464 aa45.06■■■■■ 4.8
SRRM2-222ENST00000575009 FHAD1B1AJZ9 1412 aa45.05■■■■■ 4.8
SRRM2-222ENST00000575009 KIF27Q86VH2 1401 aa44.96■■■■■ 4.79
SRRM2-222ENST00000575009 CEP170Q5SW79 1584 aa44.91■■■■■ 4.78
SRRM2-222ENST00000575009 NUP160Q12769 1436 aa44.85■■■■■ 4.77
SRRM2-222ENST00000575009 IGF1RP08069 1367 aa44.83■■■■■ 4.77
SRRM2-222ENST00000575009 ARAP1Q96P48 1450 aa44.79■■■■■ 4.76
SRRM2-222ENST00000575009 CUL7Q14999 1698 aa44.75■■■■■ 4.75
SRRM2-222ENST00000575009 CYB5RLQ6IPT4 315 aa44.71■■■■■ 4.75
SRRM2-222ENST00000575009 RUSC2Q8N2Y8 1516 aa44.65■■■■■ 4.74
SRRM2-222ENST00000575009 ERCC6L2Q5T890 1561 aa44.59■■■■■ 4.73
SRRM2-222ENST00000575009 SHROOM2Q13796 1616 aa44.57■■■■■ 4.73
SRRM2-222ENST00000575009 CARMIL1Q5VZK9 1371 aa44.56■■■■■ 4.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms