Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.568e-7■■■□□ 17.2
GTF2F1P35269 GREB1-210ENST00000628795 438 ntTSL 55.94□□□□□ -1.461e-7■■■□□ 17.2
GTF2F1P35269 SRRM2-218ENST00000574331 1759 ntTSL 219.68■□□□□ 0.744e-68■■■□□ 17.2
GTF2F1P35269 SRRM2-217ENST00000573692 459 ntTSL 318.41■□□□□ 0.544e-68■■■□□ 17.2
GTF2F1P35269 SRRM2-202ENST00000570539 431 ntTSL 211.51□□□□□ -0.574e-68■■■□□ 17.2
GTF2F1P35269 C1orf123-207ENST00000602807 490 nt25.99■■□□□ 1.752e-8■■■□□ 17.1
GTF2F1P35269 C1orf123-202ENST00000470385 1009 ntTSL 1 (best)24.92■■□□□ 1.582e-8■■■□□ 17.1
GTF2F1P35269 C1orf123-203ENST00000474227 841 ntTSL 223■■□□□ 1.272e-8■■■□□ 17.1
GTF2F1P35269 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.272e-8■■■□□ 17.1
GTF2F1P35269 TARDBP-225ENST00000621715 816 ntTSL 319.32■□□□□ 0.681e-25■■■□□ 17.1
GTF2F1P35269 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.222e-8■■■□□ 17.1
GTF2F1P35269 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.99■■□□□ 1.433e-7■■■□□ 17.1
GTF2F1P35269 MELTF-AS1-205ENST00000446695 204 ntTSL 313.24□□□□□ -0.293e-7■■■□□ 17.1
GTF2F1P35269 MELTF-AS1-203ENST00000424769 356 ntTSL 29.44□□□□□ -0.93e-7■■■□□ 17.1
GTF2F1P35269 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 32e-6■■■□□ 17.1
GTF2F1P35269 CYBA-207ENST00000566534 1006 ntTSL 515.01□□□□□ -0.012e-6■■■□□ 17.1
GTF2F1P35269 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.28■■□□□ 19e-7■■■□□ 17.1
GTF2F1P35269 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.73■□□□□ 0.119e-7■■■□□ 17.1
GTF2F1P35269 LRRC8D-205ENST00000525774 588 ntTSL 426.66■■□□□ 1.868e-7■■■□□ 17.1
GTF2F1P35269 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.438e-7■■■□□ 17.1
GTF2F1P35269 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.258e-7■■■□□ 17.1
GTF2F1P35269 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.68e-7■■■□□ 17.1
GTF2F1P35269 LTBP3-211ENST00000528966 553 ntTSL 420.83■□□□□ 0.932e-6■■■□□ 17.1
GTF2F1P35269 LTBP3-215ENST00000529764 528 ntTSL 57.25□□□□□ -1.252e-6■■■□□ 17.1
GTF2F1P35269 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.153e-6■■■□□ 17.1
GTF2F1P35269 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.573e-6■■■□□ 17.1
GTF2F1P35269 HMGA2-209ENST00000539662 485 ntTSL 311.82□□□□□ -0.523e-9■■■□□ 17.1
GTF2F1P35269 GPX4-208ENST00000592940 1184 ntTSL 524.61■■□□□ 1.532e-8■■■□□ 17.1
GTF2F1P35269 GPX4-203ENST00000585480 501 ntTSL 216.72■□□□□ 0.272e-8■■■□□ 17.1
GTF2F1P35269 GPX4-204ENST00000587648 536 ntTSL 29.68□□□□□ -0.862e-8■■■□□ 17.1
GTF2F1P35269 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.313e-8■■■□□ 17.1
GTF2F1P35269 FDPS-208ENST00000470171 746 ntTSL 216.88■□□□□ 0.293e-8■■■□□ 17.1
GTF2F1P35269 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.263e-8■■■□□ 17.1
GTF2F1P35269 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.253e-8■■■□□ 17.1
GTF2F1P35269 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.213e-8■■■□□ 17.1
GTF2F1P35269 FDPS-213ENST00000489003 976 ntTSL 216.37■□□□□ 0.213e-8■■■□□ 17.1
GTF2F1P35269 FDPS-216ENST00000491013 912 ntTSL 516.15■□□□□ 0.183e-8■■■□□ 17.1
GTF2F1P35269 FDPS-219ENST00000495308 808 ntTSL 214.76□□□□□ -0.053e-8■■■□□ 17.1
GTF2F1P35269 FDPS-207ENST00000468479 938 ntTSL 214.47□□□□□ -0.093e-8■■■□□ 17.1
GTF2F1P35269 FDPS-204ENST00000461507 1022 ntTSL 214.17□□□□□ -0.143e-8■■■□□ 17.1
GTF2F1P35269 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.193e-8■■■□□ 17.1
GTF2F1P35269 FDPS-211ENST00000477057 741 ntTSL 213.79□□□□□ -0.23e-8■■■□□ 17.1
GTF2F1P35269 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC13.69□□□□□ -0.223e-8■■■□□ 17.1
GTF2F1P35269 FDPS-209ENST00000471117 630 ntTSL 38.96□□□□□ -0.983e-8■■■□□ 17.1
GTF2F1P35269 CDC42SE1-205ENST00000491825 837 ntTSL 216.77■□□□□ 0.289e-8■■■□□ 17.1
GTF2F1P35269 CDC42SE1-203ENST00000470278 939 ntTSL 516.05■□□□□ 0.169e-8■■■□□ 17.1
GTF2F1P35269 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.449e-8■■■□□ 17.1
GTF2F1P35269 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.539e-8■■■□□ 17.1
GTF2F1P35269 CDC42SE1-206ENST00000492796 1174 ntTSL 211.63□□□□□ -0.559e-8■■■□□ 17.1
GTF2F1P35269 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.839e-8■■■□□ 17.1
GTF2F1P35269 CDC42SE1-204ENST00000483763 2379 ntTSL 1 (best)9.72□□□□□ -0.859e-8■■■□□ 17.1
GTF2F1P35269 EIF4A1-216ENST00000580888 710 ntTSL 219.35■□□□□ 0.691e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.27■□□□□ 0.521e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-208ENST00000578476 573 ntTSL 217.8■□□□□ 0.441e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.311e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-214ENST00000580461 909 ntTSL 213.91□□□□□ -0.181e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-226ENST00000582848 591 ntTSL 313.22□□□□□ -0.291e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-236ENST00000584901 1021 ntTSL 213.22□□□□□ -0.291e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-213ENST00000579139 568 ntTSL 412.63□□□□□ -0.391e-12■■■□□ 17.1
GTF2F1P35269 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.391e-12■■■□□ 17.1
GTF2F1P35269 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.44□□□□□ -0.421e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC12.37□□□□□ -0.431e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-218ENST00000581544 1444 ntTSL 212.29□□□□□ -0.441e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-223ENST00000582169 552 ntTSL 411.44□□□□□ -0.581e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-229ENST00000583802 563 ntTSL 411.35□□□□□ -0.591e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-209ENST00000578495 916 ntTSL 511.15□□□□□ -0.621e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-231ENST00000584054 716 ntTSL 210.56□□□□□ -0.721e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-215ENST00000580886 562 ntTSL 210.56□□□□□ -0.721e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-212ENST00000579085 569 ntTSL 410.17□□□□□ -0.781e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-232ENST00000584712 782 ntTSL 210.01□□□□□ -0.811e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-233ENST00000584784 818 ntTSL 59.98□□□□□ -0.811e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-237ENST00000585024 577 ntTSL 49.85□□□□□ -0.831e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-202ENST00000396527 1169 ntTSL 28.81□□□□□ -11e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-230ENST00000583899 665 ntTSL 36.96□□□□□ -1.31e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-211ENST00000578754 547 ntTSL 45.95□□□□□ -1.461e-12■■■□□ 17.1
GTF2F1P35269 EIF4A1-224ENST00000582213 560 ntTSL 44.46□□□□□ -1.71e-12■■■□□ 17.1
GTF2F1P35269 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.33e-7■■■□□ 17.1
GTF2F1P35269 BCAR1-222ENST00000569340 714 ntTSL 314.61□□□□□ -0.073e-7■■■□□ 17.1
GTF2F1P35269 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.51e-6■■■□□ 17.1
GTF2F1P35269 FLOT1-208ENST00000470643 852 ntTSL 324.19■■□□□ 1.461e-6■■■□□ 17.1
GTF2F1P35269 FLOT1-210ENST00000484168 1101 ntTSL 524.19■■□□□ 1.461e-6■■■□□ 17.1
GTF2F1P35269 CBFA2T2-207ENST00000471007 712 ntTSL 223.87■■□□□ 1.412e-8■■■□□ 17.1
GTF2F1P35269 AATK-AS1-201ENST00000414089 1577 ntTSL 222.49■■□□□ 1.192e-8■■■□□ 17.1
GTF2F1P35269 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.182e-8■■■□□ 17.1
GTF2F1P35269 AATK-AS1-202ENST00000571031 1488 ntTSL 1 (best)22.12■■□□□ 1.132e-8■■■□□ 17.1
GTF2F1P35269 FLOT1-211ENST00000484693 1001 ntTSL 221.77■■□□□ 1.081e-6■■■□□ 17.1
GTF2F1P35269 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.962e-8■■■□□ 17.1
GTF2F1P35269 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.462e-8■■■□□ 17.1
GTF2F1P35269 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.52■□□□□ 0.42e-8■■■□□ 17.1
GTF2F1P35269 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.33■□□□□ 0.372e-8■■■□□ 17.1
GTF2F1P35269 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.182e-8■■■□□ 17.1
GTF2F1P35269 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC15.38■□□□□ 0.052e-8■■■□□ 17.1
GTF2F1P35269 NEK6-202ENST00000373596 758 ntTSL 315.01□□□□□ -0.012e-8■■■□□ 17.1
GTF2F1P35269 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC13.59□□□□□ -0.232e-8■■■□□ 17.1
GTF2F1P35269 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC13.18□□□□□ -0.32e-8■■■□□ 17.1
GTF2F1P35269 LGR5-206ENST00000550851 4095 ntTSL 212.95□□□□□ -0.342e-8■■■□□ 17.1
GTF2F1P35269 NEK6-208ENST00000425237 806 ntTSL 312.18□□□□□ -0.462e-8■■■□□ 17.1
GTF2F1P35269 IGSF1-201ENST00000361420 4378 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.562e-8■■■□□ 17.1
GTF2F1P35269 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.572e-8■■■□□ 17.1
GTF2F1P35269 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.632e-8■■■□□ 17.1
Retrieved 100 of 18,214 protein–RNA pairs in 130.3 ms