RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
FDPS-209ENST00000471117 ABCC9O60706 1549 aa18.69■□□□□ 0.58
FDPS-209ENST00000471117 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
FDPS-209ENST00000471117 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
FDPS-209ENST00000471117 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
FDPS-209ENST00000471117 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
FDPS-209ENST00000471117 RB1CC1Q8TDY2 1594 aa17.25■□□□□ 0.35
FDPS-209ENST00000471117 UNC13AQ9UPW8 1703 aa16.97■□□□□ 0.31
FDPS-209ENST00000471117 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
FDPS-209ENST00000471117 NACADO15069 1562 aa16.85■□□□□ 0.29
FDPS-209ENST00000471117 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
FDPS-209ENST00000471117 CC2D2AQ9P2K1 1620 aa16.8■□□□□ 0.28
FDPS-209ENST00000471117 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
FDPS-209ENST00000471117 TRIM41Q8WV44 630 aa16.54■□□□□ 0.24
FDPS-209ENST00000471117 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
FDPS-209ENST00000471117 CUX2O14529 1486 aa16.4■□□□□ 0.22
FDPS-209ENST00000471117 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
FDPS-209ENST00000471117 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
FDPS-209ENST00000471117 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
FDPS-209ENST00000471117 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
FDPS-209ENST00000471117 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
FDPS-209ENST00000471117 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
FDPS-209ENST00000471117 AEBP2Q6ZN18 517 aaPredicted RBP15.79■□□□□ 0.12
FDPS-209ENST00000471117 NESP48681 1621 aa15.79■□□□□ 0.12
FDPS-209ENST00000471117 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
FDPS-209ENST00000471117 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
FDPS-209ENST00000471117 NCAPD3P42695 1498 aa15.58■□□□□ 0.08
FDPS-209ENST00000471117 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
FDPS-209ENST00000471117 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
FDPS-209ENST00000471117 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
FDPS-209ENST00000471117 TRHP20396 242 aaPredicted RBP15.51■□□□□ 0.07
FDPS-209ENST00000471117 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
FDPS-209ENST00000471117 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
FDPS-209ENST00000471117 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
FDPS-209ENST00000471117 ATAD2BQ9ULI0 1458 aa15.42■□□□□ 0.06
FDPS-209ENST00000471117 LAMC3Q9Y6N6 1575 aa15.39■□□□□ 0.05
FDPS-209ENST00000471117 HMGXB3Q12766 1538 aa15.35■□□□□ 0.05
FDPS-209ENST00000471117 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
FDPS-209ENST00000471117 CYB5RLQ6IPT4 315 aa15.33■□□□□ 0.04
FDPS-209ENST00000471117 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
FDPS-209ENST00000471117 ARHGEF11O15085 1522 aa15.31■□□□□ 0.04
FDPS-209ENST00000471117 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
FDPS-209ENST00000471117 WDR62O43379 1518 aa15.27■□□□□ 0.03
FDPS-209ENST00000471117 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
FDPS-209ENST00000471117 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
FDPS-209ENST00000471117 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
FDPS-209ENST00000471117 CADPSQ9ULU8 1353 aa15.08■□□□□ 0
FDPS-209ENST00000471117 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
FDPS-209ENST00000471117 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
FDPS-209ENST00000471117 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
FDPS-209ENST00000471117 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
FDPS-209ENST00000471117 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
FDPS-209ENST00000471117 CHD1O14646 1710 aa14.89□□□□□ -0.03
FDPS-209ENST00000471117 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.04
FDPS-209ENST00000471117 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
FDPS-209ENST00000471117 FBLN2P98095 1184 aa14.82□□□□□ -0.04
FDPS-209ENST00000471117 SUPT5HO00267 1087 aaKnown RBP14.76□□□□□ -0.05
FDPS-209ENST00000471117 IFT140Q96RY7 1462 aa14.75□□□□□ -0.05
FDPS-209ENST00000471117 EIF4G3O43432 1585 aaKnown RBP14.74□□□□□ -0.05
FDPS-209ENST00000471117 KDM4FA0A1W2PPD8 638 aa14.7□□□□□ -0.06
FDPS-209ENST00000471117 WIZO95785 1651 aa14.68□□□□□ -0.06
FDPS-209ENST00000471117 CFTRP13569 1480 aa14.68□□□□□ -0.06
FDPS-209ENST00000471117 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.069e-9■■■■■ 27.3
FDPS-209ENST00000471117 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
FDPS-209ENST00000471117 GAPVD1Q14C86 1478 aa14.56□□□□□ -0.08
FDPS-209ENST00000471117 KIF13AQ9H1H9 1805 aa14.55□□□□□ -0.08
FDPS-209ENST00000471117 TOPBP1Q92547 1522 aa14.55□□□□□ -0.08
FDPS-209ENST00000471117 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
FDPS-209ENST00000471117 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
FDPS-209ENST00000471117 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
FDPS-209ENST00000471117 TARBP1Q13395 1621 aaKnown RBP14.49□□□□□ -0.09
FDPS-209ENST00000471117 FBXO41Q8TF61 875 aa14.49□□□□□ -0.09
FDPS-209ENST00000471117 ERCC6L2Q5T890 1561 aa14.47□□□□□ -0.09
FDPS-209ENST00000471117 CHMP7Q8WUX9 453 aaPredicted RBP14.47□□□□□ -0.09
FDPS-209ENST00000471117 HECW2Q9P2P5 1572 aa14.46□□□□□ -0.09
FDPS-209ENST00000471117 LMTK3Q96Q04 1460 aa14.45□□□□□ -0.1
FDPS-209ENST00000471117 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
FDPS-209ENST00000471117 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
FDPS-209ENST00000471117 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
FDPS-209ENST00000471117 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
FDPS-209ENST00000471117 KDM6BO15054 1643 aa14.37□□□□□ -0.11
FDPS-209ENST00000471117 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
FDPS-209ENST00000471117 SOCS7O14512 581 aa14.35□□□□□ -0.11
FDPS-209ENST00000471117 FAM69CQ0P6D2 419 aa14.35□□□□□ -0.11
FDPS-209ENST00000471117 ILDR2Q71H61 639 aa14.34□□□□□ -0.11
FDPS-209ENST00000471117 POLA1P09884 1462 aaPredicted RBP14.33□□□□□ -0.12
FDPS-209ENST00000471117 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
FDPS-209ENST00000471117 ADGRL1O94910 1474 aa14.31□□□□□ -0.12
FDPS-209ENST00000471117 TSPOAP1O95153 1857 aa14.31□□□□□ -0.12
FDPS-209ENST00000471117 MAGI1Q96QZ7 1491 aaPredicted RBP14.3□□□□□ -0.12
FDPS-209ENST00000471117 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
FDPS-209ENST00000471117 SOGA1O94964 1423 aa14.27□□□□□ -0.12
FDPS-209ENST00000471117 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
FDPS-209ENST00000471117 GRIN2BQ13224 1484 aa14.22□□□□□ -0.13
FDPS-209ENST00000471117 CEP170Q5SW79 1584 aa14.21□□□□□ -0.14
FDPS-209ENST00000471117 DIP2BQ9P265 1576 aa14.2□□□□□ -0.14
FDPS-209ENST00000471117 DISP3Q9P2K9 1392 aa14.2□□□□□ -0.14
FDPS-209ENST00000471117 WDR97A6NE52 1622 aa14.16□□□□□ -0.14
FDPS-209ENST00000471117 PBRM1Q86U86 1689 aa14.16□□□□□ -0.14
FDPS-209ENST00000471117 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms