RNA–Protein interactions for RNA: ENST00000573692.1

SRRM2-217, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-217ENST00000573692 NISCHQ9Y2I1 1504 aa41.06■■■■■ 4.16
SRRM2-217ENST00000573692 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.39
SRRM2-217ENST00000573692 ABCC9O60706 1549 aa34.96■■■■□ 3.19
SRRM2-217ENST00000573692 ZCCHC6Q5VYS8 1495 aaKnown RBP34.31■■■■□ 3.08
SRRM2-217ENST00000573692 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
SRRM2-217ENST00000573692 DCAF1Q9Y4B6 1507 aa33.95■■■■□ 3.03
SRRM2-217ENST00000573692 NACADO15069 1562 aa33.94■■■■□ 3.02
SRRM2-217ENST00000573692 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
SRRM2-217ENST00000573692 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
SRRM2-217ENST00000573692 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
SRRM2-217ENST00000573692 UNC13AQ9UPW8 1703 aa33.13■■■□□ 2.89
SRRM2-217ENST00000573692 SHROOM4Q9ULL8 1493 aa32.89■■■□□ 2.86
SRRM2-217ENST00000573692 BICRAQ9NZM4 1560 aa32.79■■■□□ 2.84
SRRM2-217ENST00000573692 PABPN1Q86U42 306 aaKnown RBP eCLIP32.78■■■□□ 2.843e-10■■□□□ 13
SRRM2-217ENST00000573692 CECR2Q9BXF3 1484 aa31.94■■■□□ 2.7
SRRM2-217ENST00000573692 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
SRRM2-217ENST00000573692 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
SRRM2-217ENST00000573692 SMARCA4P51532 1647 aa31.76■■■□□ 2.67
SRRM2-217ENST00000573692 MROH2BQ7Z745 1585 aa31.67■■■□□ 2.66
SRRM2-217ENST00000573692 CC2D2AQ9P2K1 1620 aa31.63■■■□□ 2.65
SRRM2-217ENST00000573692 DNAJC5BQ9UF47 199 aa31.52■■■□□ 2.64
SRRM2-217ENST00000573692 RSF1Q96T23 1441 aaPredicted RBP31.5■■■□□ 2.63
SRRM2-217ENST00000573692 SMARCA2P51531 1590 aa31.42■■■□□ 2.62
SRRM2-217ENST00000573692 ATAD2BQ9ULI0 1458 aa31.4■■■□□ 2.62
SRRM2-217ENST00000573692 WIZO95785 1651 aa31.4■■■□□ 2.62
SRRM2-217ENST00000573692 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.61
SRRM2-217ENST00000573692 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
SRRM2-217ENST00000573692 SUPT5HO00267 1087 aaKnown RBP31.25■■■□□ 2.59
SRRM2-217ENST00000573692 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
SRRM2-217ENST00000573692 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
SRRM2-217ENST00000573692 TOP2AP11388 1531 aaKnown RBP31.06■■■□□ 2.56
SRRM2-217ENST00000573692 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.51
SRRM2-217ENST00000573692 CADPSQ9ULU8 1353 aa30.42■■■□□ 2.46
SRRM2-217ENST00000573692 NESP48681 1621 aa30.42■■■□□ 2.46
SRRM2-217ENST00000573692 LAMC3Q9Y6N6 1575 aa30.4■■■□□ 2.46
SRRM2-217ENST00000573692 CFTRP13569 1480 aa30.36■■■□□ 2.45
SRRM2-217ENST00000573692 PRDM2Q13029 1718 aa30.25■■■□□ 2.43
SRRM2-217ENST00000573692 PDS5BQ9NTI5 1447 aa30.18■■■□□ 2.42
SRRM2-217ENST00000573692 FANCD2Q9BXW9 1451 aa30.1■■■□□ 2.41
SRRM2-217ENST00000573692 KIF21AQ7Z4S6 1674 aa30.1■■■□□ 2.41
SRRM2-217ENST00000573692 ERCC6Q03468 1493 aa30.09■■■□□ 2.41
SRRM2-217ENST00000573692 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.4
SRRM2-217ENST00000573692 MRC2Q9UBG0 1479 aa29.84■■■□□ 2.37
SRRM2-217ENST00000573692 THOC2Q8NI27 1593 aaKnown RBP29.8■■■□□ 2.36
SRRM2-217ENST00000573692 ABCC8Q09428 1581 aa29.79■■■□□ 2.36
SRRM2-217ENST00000573692 URB2Q14146 1524 aaKnown RBP29.76■■■□□ 2.35
SRRM2-217ENST00000573692 WDR62O43379 1518 aa29.71■■■□□ 2.35
SRRM2-217ENST00000573692 WRNQ14191 1432 aaPredicted RBP eCLIP29.71■■■□□ 2.35
SRRM2-217ENST00000573692 DNMBPQ6XZF7 1577 aa29.7■■■□□ 2.35
SRRM2-217ENST00000573692 CUX1P39880 1505 aa29.68■■■□□ 2.34
SRRM2-217ENST00000573692 TOPBP1Q92547 1522 aa29.68■■■□□ 2.34
SRRM2-217ENST00000573692 SYNJ1O43426 1573 aa29.61■■■□□ 2.33
SRRM2-217ENST00000573692 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
SRRM2-217ENST00000573692 BIVM-ERCC5R4GMW8 1640 aa29.58■■■□□ 2.33
SRRM2-217ENST00000573692 CUX2O14529 1486 aa29.5■■■□□ 2.31
SRRM2-217ENST00000573692 FGD5Q6ZNL6 1462 aa29.49■■■□□ 2.31
SRRM2-217ENST00000573692 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
SRRM2-217ENST00000573692 TRIM41Q8WV44 630 aa29.46■■■□□ 2.31
SRRM2-217ENST00000573692 POLA1P09884 1462 aaPredicted RBP29.46■■■□□ 2.31
SRRM2-217ENST00000573692 SOGA1O94964 1423 aa29.37■■■□□ 2.29
SRRM2-217ENST00000573692 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
SRRM2-217ENST00000573692 IFT140Q96RY7 1462 aa29.34■■■□□ 2.29
SRRM2-217ENST00000573692 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
SRRM2-217ENST00000573692 WDR97A6NE52 1622 aa29.22■■■□□ 2.27
SRRM2-217ENST00000573692 ABCA10Q8WWZ4 1543 aa29.2■■■□□ 2.27
SRRM2-217ENST00000573692 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
SRRM2-217ENST00000573692 TDRD9Q8NDG6 1382 aaKnown RBP29.14■■■□□ 2.26
SRRM2-217ENST00000573692 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.252e-11■■■■■ 27.5
SRRM2-217ENST00000573692 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
SRRM2-217ENST00000573692 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
SRRM2-217ENST00000573692 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
SRRM2-217ENST00000573692 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
SRRM2-217ENST00000573692 PBRM1Q86U86 1689 aa28.98■■■□□ 2.23
SRRM2-217ENST00000573692 RUSC2Q8N2Y8 1516 aa28.98■■■□□ 2.23
SRRM2-217ENST00000573692 GRIN2BQ13224 1484 aa28.94■■■□□ 2.22
SRRM2-217ENST00000573692 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.22
SRRM2-217ENST00000573692 ERICH3Q5RHP9 1530 aa28.87■■■□□ 2.21
SRRM2-217ENST00000573692 EEA1Q15075 1411 aa28.86■■■□□ 2.21
SRRM2-217ENST00000573692 IGF1RP08069 1367 aa28.84■■■□□ 2.21
SRRM2-217ENST00000573692 SNAPC4Q5SXM2 1469 aa28.84■■■□□ 2.21
SRRM2-217ENST00000573692 MAGI1Q96QZ7 1491 aaPredicted RBP28.79■■■□□ 2.2
SRRM2-217ENST00000573692 CSRNP3Q8WYN3 585 aa28.77■■■□□ 2.2
SRRM2-217ENST00000573692 DNAJC5Q9H3Z4 198 aa28.77■■■□□ 2.2
SRRM2-217ENST00000573692 CUL7Q14999 1698 aa28.76■■■□□ 2.19
SRRM2-217ENST00000573692 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
SRRM2-217ENST00000573692 FHAD1B1AJZ9 1412 aa28.71■■■□□ 2.19
SRRM2-217ENST00000573692 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.18
SRRM2-217ENST00000573692 FBLN2P98095 1184 aa28.69■■■□□ 2.18
SRRM2-217ENST00000573692 SYNJ2O15056 1496 aa28.68■■■□□ 2.18
SRRM2-217ENST00000573692 CHMP7Q8WUX9 453 aaPredicted RBP28.67■■■□□ 2.18
SRRM2-217ENST00000573692 CHD1O14646 1710 aa28.66■■■□□ 2.18
SRRM2-217ENST00000573692 PRXQ9BXM0 1461 aa28.6■■■□□ 2.17
SRRM2-217ENST00000573692 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
SRRM2-217ENST00000573692 GRIN2AQ12879 1464 aa28.57■■■□□ 2.16
SRRM2-217ENST00000573692 KIF21BO75037 1637 aa28.54■■■□□ 2.16
SRRM2-217ENST00000573692 EHMT2Q96KQ7 1210 aa28.51■■■□□ 2.15
SRRM2-217ENST00000573692 OSCARQ8IYS5 282 aa28.43■■■□□ 2.14
SRRM2-217ENST00000573692 GOLGA3Q08378 1498 aa28.42■■■□□ 2.14
SRRM2-217ENST00000573692 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
SRRM2-217ENST00000573692 NUP160Q12769 1436 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms