RNA–Protein interactions for RNA: ENST00000484693.1

FLOT1-211, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-211ENST00000484693 NISCHQ9Y2I1 1504 aa48.22■■■■■ 5.31
FLOT1-211ENST00000484693 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
FLOT1-211ENST00000484693 ABCC9O60706 1549 aa43.19■■■■■ 4.5
FLOT1-211ENST00000484693 RB1CC1Q8TDY2 1594 aa41.16■■■■■ 4.18
FLOT1-211ENST00000484693 NACADO15069 1562 aa40.9■■■■■ 4.14
FLOT1-211ENST00000484693 DCAF8L2P0C7V8 631 aa40.54■■■■■ 4.08
FLOT1-211ENST00000484693 DNAJC5BQ9UF47 199 aa40.42■■■■■ 4.06
FLOT1-211ENST00000484693 MYO15BQ96JP2 1530 aa40.36■■■■■ 4.05
FLOT1-211ENST00000484693 UNC13AQ9UPW8 1703 aa40.24■■■■■ 4.03
FLOT1-211ENST00000484693 PABPN1Q86U42 306 aaKnown RBP eCLIP40.16■■■■■ 4.02
FLOT1-211ENST00000484693 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
FLOT1-211ENST00000484693 BICRAQ9NZM4 1560 aa39.97■■■■□ 3.99
FLOT1-211ENST00000484693 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
FLOT1-211ENST00000484693 SHROOM4Q9ULL8 1493 aa39.48■■■■□ 3.91
FLOT1-211ENST00000484693 SCRIBQ14160 1630 aa39.42■■■■□ 3.9
FLOT1-211ENST00000484693 CC2D2AQ9P2K1 1620 aa39.04■■■■□ 3.84
FLOT1-211ENST00000484693 EIF4G1Q04637 1599 aaKnown RBP38.98■■■■□ 3.83
FLOT1-211ENST00000484693 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
FLOT1-211ENST00000484693 NCAPD3P42695 1498 aa37.73■■■■□ 3.63
FLOT1-211ENST00000484693 ATAD2BQ9ULI0 1458 aa37.63■■■■□ 3.61
FLOT1-211ENST00000484693 SMARCA4P51532 1647 aa37.62■■■■□ 3.61
FLOT1-211ENST00000484693 SMARCA2P51531 1590 aa37.55■■■■□ 3.6
FLOT1-211ENST00000484693 HMGXB3Q12766 1538 aa37.5■■■■□ 3.59
FLOT1-211ENST00000484693 BAZ1AQ9NRL2 1556 aaPredicted RBP37.44■■■■□ 3.58
FLOT1-211ENST00000484693 ERCC6Q03468 1493 aa37.29■■■■□ 3.56
FLOT1-211ENST00000484693 PEG3Q9GZU2 1588 aa37.27■■■■□ 3.56
FLOT1-211ENST00000484693 BAZ1BQ9UIG0 1483 aaKnown RBP37.26■■■■□ 3.56
FLOT1-211ENST00000484693 CUX2O14529 1486 aa37.24■■■■□ 3.55
FLOT1-211ENST00000484693 MROH2BQ7Z745 1585 aa37.15■■■■□ 3.54
FLOT1-211ENST00000484693 NESP48681 1621 aa37.12■■■■□ 3.53
FLOT1-211ENST00000484693 DNAJC5Q9H3Z4 198 aa37.1■■■■□ 3.53
FLOT1-211ENST00000484693 LAMC3Q9Y6N6 1575 aa36.9■■■■□ 3.5
FLOT1-211ENST00000484693 THOC2Q8NI27 1593 aaKnown RBP36.79■■■■□ 3.48
FLOT1-211ENST00000484693 WIZO95785 1651 aa36.7■■■■□ 3.47
FLOT1-211ENST00000484693 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
FLOT1-211ENST00000484693 PDS5BQ9NTI5 1447 aa36.65■■■■□ 3.46
FLOT1-211ENST00000484693 CADPSQ9ULU8 1353 aa36.57■■■■□ 3.45
FLOT1-211ENST00000484693 RSF1Q96T23 1441 aaPredicted RBP36.38■■■■□ 3.41
FLOT1-211ENST00000484693 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
FLOT1-211ENST00000484693 WDR62O43379 1518 aa36.29■■■■□ 3.4
FLOT1-211ENST00000484693 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
FLOT1-211ENST00000484693 CEP164Q9UPV0 1460 aa36.22■■■■□ 3.39
FLOT1-211ENST00000484693 CFTRP13569 1480 aa36.18■■■■□ 3.38
FLOT1-211ENST00000484693 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
FLOT1-211ENST00000484693 URB2Q14146 1524 aaKnown RBP35.89■■■■□ 3.34
FLOT1-211ENST00000484693 PRDM2Q13029 1718 aa35.87■■■■□ 3.33
FLOT1-211ENST00000484693 CCDC88BA6NC98 1476 aa35.81■■■■□ 3.32
FLOT1-211ENST00000484693 TOPBP1Q92547 1522 aa35.51■■■■□ 3.27
FLOT1-211ENST00000484693 IFT140Q96RY7 1462 aa35.49■■■■□ 3.27
FLOT1-211ENST00000484693 TRIM41Q8WV44 630 aa35.47■■■■□ 3.27
FLOT1-211ENST00000484693 OSCARQ8IYS5 282 aa35.46■■■■□ 3.27
FLOT1-211ENST00000484693 ZNF608Q9ULD9 1512 aaPredicted RBP35.42■■■■□ 3.26
FLOT1-211ENST00000484693 ABCC8Q09428 1581 aa35.42■■■■□ 3.26
FLOT1-211ENST00000484693 DNMBPQ6XZF7 1577 aa35.4■■■■□ 3.26
FLOT1-211ENST00000484693 EIF4G3O43432 1585 aaKnown RBP35.26■■■■□ 3.24
FLOT1-211ENST00000484693 TARBP1Q13395 1621 aaKnown RBP35.2■■■■□ 3.23
FLOT1-211ENST00000484693 POLA1P09884 1462 aaPredicted RBP35.15■■■■□ 3.22
FLOT1-211ENST00000484693 RIMBP3CA6NJZ7 1639 aa35.08■■■■□ 3.21
FLOT1-211ENST00000484693 RIMBP3BA6NNM3 1639 aa35.08■■■■□ 3.21
FLOT1-211ENST00000484693 RIMBP3Q9UFD9 1639 aa35.08■■■■□ 3.21
FLOT1-211ENST00000484693 AQRO60306 1485 aaKnown RBP eCLIP35.08■■■■□ 3.213e-8■■■■■ 33
FLOT1-211ENST00000484693 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
FLOT1-211ENST00000484693 CHD1O14646 1710 aa34.99■■■■□ 3.19
FLOT1-211ENST00000484693 ARHGEF11O15085 1522 aa34.97■■■■□ 3.19
FLOT1-211ENST00000484693 SOGA1O94964 1423 aa34.94■■■■□ 3.18
FLOT1-211ENST00000484693 FGD5Q6ZNL6 1462 aa34.93■■■■□ 3.18
FLOT1-211ENST00000484693 CUX1P39880 1505 aa34.91■■■■□ 3.18
FLOT1-211ENST00000484693 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
FLOT1-211ENST00000484693 TDRD9Q8NDG6 1382 aaKnown RBP34.87■■■■□ 3.17
FLOT1-211ENST00000484693 FBLN2P98095 1184 aa34.79■■■■□ 3.16
FLOT1-211ENST00000484693 SNAPC4Q5SXM2 1469 aa34.77■■■■□ 3.16
FLOT1-211ENST00000484693 SUPT5HO00267 1087 aaKnown RBP34.72■■■■□ 3.15
FLOT1-211ENST00000484693 MAGI1Q96QZ7 1491 aaPredicted RBP34.68■■■■□ 3.14
FLOT1-211ENST00000484693 GRIN2BQ13224 1484 aa34.67■■■■□ 3.14
FLOT1-211ENST00000484693 ARAP1Q96P48 1450 aa34.64■■■■□ 3.14
FLOT1-211ENST00000484693 CYB5RLQ6IPT4 315 aa34.62■■■■□ 3.13
FLOT1-211ENST00000484693 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
FLOT1-211ENST00000484693 SYNJ1O43426 1573 aa34.57■■■■□ 3.12
FLOT1-211ENST00000484693 PBRM1Q86U86 1689 aa34.57■■■■□ 3.12
FLOT1-211ENST00000484693 CHMP7Q8WUX9 453 aaPredicted RBP34.56■■■■□ 3.12
FLOT1-211ENST00000484693 SYNJ2O15056 1496 aa34.56■■■■□ 3.12
FLOT1-211ENST00000484693 GAPVD1Q14C86 1478 aa34.55■■■■□ 3.12
FLOT1-211ENST00000484693 ABCA10Q8WWZ4 1543 aa34.55■■■■□ 3.12
FLOT1-211ENST00000484693 ABCA5Q8WWZ7 1642 aa34.52■■■■□ 3.12
FLOT1-211ENST00000484693 BIVM-ERCC5R4GMW8 1640 aa34.39■■■■□ 3.1
FLOT1-211ENST00000484693 WRNQ14191 1432 aaPredicted RBP eCLIP34.38■■■■□ 3.09
FLOT1-211ENST00000484693 TOP2BQ02880 1626 aa34.37■■■■□ 3.09
FLOT1-211ENST00000484693 ADAMTS12P58397 1594 aa34.26■■■■□ 3.07
FLOT1-211ENST00000484693 GRIN2AQ12879 1464 aa34.23■■■■□ 3.07
FLOT1-211ENST00000484693 TRHP20396 242 aaPredicted RBP34.21■■■■□ 3.07
FLOT1-211ENST00000484693 NUP160Q12769 1436 aa34.13■■■■□ 3.05
FLOT1-211ENST00000484693 ERICH3Q5RHP9 1530 aa34.12■■■■□ 3.05
FLOT1-211ENST00000484693 FHAD1B1AJZ9 1412 aa34.12■■■■□ 3.05
FLOT1-211ENST00000484693 CEP170Q5SW79 1584 aa34.11■■■■□ 3.05
FLOT1-211ENST00000484693 ERCC6L2Q5T890 1561 aa34.03■■■■□ 3.04
FLOT1-211ENST00000484693 SHROOM2Q13796 1616 aa33.99■■■■□ 3.03
FLOT1-211ENST00000484693 RUSC2Q8N2Y8 1516 aa33.77■■■■□ 3
FLOT1-211ENST00000484693 PRG4Q92954 1404 aaPredicted RBP33.76■■■□□ 2.99
FLOT1-211ENST00000484693 JPH4Q96JJ6 628 aa33.69■■■□□ 2.98
FLOT1-211ENST00000484693 KIF27Q86VH2 1401 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms