RNA–Protein interactions for RNA: ENST00000394593.7

LRRC8D-202, Transcript of leucine rich repeat containing 8 VRAC subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC8D, Length 3,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8D-202ENST00000394593 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.72
LRRC8D-202ENST00000394593 CCDC180Q9P1Z9 1646 aa17.29■□□□□ 0.36
LRRC8D-202ENST00000394593 SHROOM4Q9ULL8 1493 aa16.87■□□□□ 0.29
LRRC8D-202ENST00000394593 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
LRRC8D-202ENST00000394593 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
LRRC8D-202ENST00000394593 DCAF1Q9Y4B6 1507 aa16.42■□□□□ 0.22
LRRC8D-202ENST00000394593 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
LRRC8D-202ENST00000394593 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
LRRC8D-202ENST00000394593 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
LRRC8D-202ENST00000394593 NACADO15069 1562 aa15.94■□□□□ 0.14
LRRC8D-202ENST00000394593 HRCP23327 699 aa15.86■□□□□ 0.13
LRRC8D-202ENST00000394593 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
LRRC8D-202ENST00000394593 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
LRRC8D-202ENST00000394593 RB1CC1Q8TDY2 1594 aa15.72■□□□□ 0.11
LRRC8D-202ENST00000394593 ABCC9O60706 1549 aa15.72■□□□□ 0.11
LRRC8D-202ENST00000394593 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
LRRC8D-202ENST00000394593 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
LRRC8D-202ENST00000394593 SCRIBQ14160 1630 aa15.49■□□□□ 0.07
LRRC8D-202ENST00000394593 RSF1Q96T23 1441 aaPredicted RBP15.46■□□□□ 0.07
LRRC8D-202ENST00000394593 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
LRRC8D-202ENST00000394593 FAM9AQ8IZU1 332 aaPredicted RBP15.36■□□□□ 0.05
LRRC8D-202ENST00000394593 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
LRRC8D-202ENST00000394593 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
LRRC8D-202ENST00000394593 BICRAQ9NZM4 1560 aa15.32■□□□□ 0.04
LRRC8D-202ENST00000394593 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
LRRC8D-202ENST00000394593 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
LRRC8D-202ENST00000394593 WIZO95785 1651 aa15.1■□□□□ 0.01
LRRC8D-202ENST00000394593 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0.01
LRRC8D-202ENST00000394593 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
LRRC8D-202ENST00000394593 SMARCA4P51532 1647 aa15.04■□□□□ -0
LRRC8D-202ENST00000394593 ZEB1P37275 1124 aaPredicted RBP15□□□□□ -0.01
LRRC8D-202ENST00000394593 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
LRRC8D-202ENST00000394593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
LRRC8D-202ENST00000394593 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
LRRC8D-202ENST00000394593 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
LRRC8D-202ENST00000394593 TTBK1Q5TCY1 1321 aaPredicted RBP14.84□□□□□ -0.03
LRRC8D-202ENST00000394593 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
LRRC8D-202ENST00000394593 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
LRRC8D-202ENST00000394593 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
LRRC8D-202ENST00000394593 CCER1Q8TC90 406 aaPredicted RBP14.76□□□□□ -0.05
LRRC8D-202ENST00000394593 SOGA1O94964 1423 aa14.74□□□□□ -0.05
LRRC8D-202ENST00000394593 HMGXB3Q12766 1538 aa14.73□□□□□ -0.05
LRRC8D-202ENST00000394593 RUSC2Q8N2Y8 1516 aa14.7□□□□□ -0.06
LRRC8D-202ENST00000394593 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
LRRC8D-202ENST00000394593 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
LRRC8D-202ENST00000394593 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
LRRC8D-202ENST00000394593 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
LRRC8D-202ENST00000394593 WRNQ14191 1432 aaPredicted RBP eCLIP14.63□□□□□ -0.071e-13■■■■■ 64
LRRC8D-202ENST00000394593 UBTFP17480 764 aaKnown RBP14.61□□□□□ -0.07
LRRC8D-202ENST00000394593 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
LRRC8D-202ENST00000394593 TNIKQ9UKE5 1360 aa14.59□□□□□ -0.07
LRRC8D-202ENST00000394593 NEUROD1Q13562 356 aa14.56□□□□□ -0.08
LRRC8D-202ENST00000394593 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
LRRC8D-202ENST00000394593 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.08
LRRC8D-202ENST00000394593 PRDM2Q13029 1718 aa14.52□□□□□ -0.08
LRRC8D-202ENST00000394593 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
LRRC8D-202ENST00000394593 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
LRRC8D-202ENST00000394593 EEA1Q15075 1411 aa14.48□□□□□ -0.09
LRRC8D-202ENST00000394593 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
LRRC8D-202ENST00000394593 SYNJ1O43426 1573 aa14.46□□□□□ -0.1
LRRC8D-202ENST00000394593 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
LRRC8D-202ENST00000394593 RANGAP1P46060 587 aaPredicted RBP14.42□□□□□ -0.1
LRRC8D-202ENST00000394593 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
LRRC8D-202ENST00000394593 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
LRRC8D-202ENST00000394593 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
LRRC8D-202ENST00000394593 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
LRRC8D-202ENST00000394593 CLIP1P30622 1438 aa14.37□□□□□ -0.11
LRRC8D-202ENST00000394593 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
LRRC8D-202ENST00000394593 KIF21BO75037 1637 aa14.33□□□□□ -0.11
LRRC8D-202ENST00000394593 CENPBP07199 599 aaPredicted RBP14.32□□□□□ -0.12
LRRC8D-202ENST00000394593 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
LRRC8D-202ENST00000394593 CFTRP13569 1480 aa14.3□□□□□ -0.12
LRRC8D-202ENST00000394593 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
LRRC8D-202ENST00000394593 BIVM-ERCC5R4GMW8 1640 aa14.28□□□□□ -0.12
LRRC8D-202ENST00000394593 MIER1Q8N108 512 aa14.27□□□□□ -0.13
LRRC8D-202ENST00000394593 APLP2Q06481 763 aa14.23□□□□□ -0.13
LRRC8D-202ENST00000394593 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
LRRC8D-202ENST00000394593 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
LRRC8D-202ENST00000394593 KANK4Q5T7N3 995 aaPredicted RBP14.17□□□□□ -0.14
LRRC8D-202ENST00000394593 ARAP1Q96P48 1450 aa14.13□□□□□ -0.15
LRRC8D-202ENST00000394593 PRXQ9BXM0 1461 aa14.12□□□□□ -0.15
LRRC8D-202ENST00000394593 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
LRRC8D-202ENST00000394593 DHX57Q6P158 1386 aaKnown RBP14.09□□□□□ -0.15
LRRC8D-202ENST00000394593 CUX1P39880 1505 aa14.08□□□□□ -0.15
LRRC8D-202ENST00000394593 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
LRRC8D-202ENST00000394593 ITGAEP38570 1179 aa14.02□□□□□ -0.16
LRRC8D-202ENST00000394593 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
LRRC8D-202ENST00000394593 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
LRRC8D-202ENST00000394593 WDR97A6NE52 1622 aa13.99□□□□□ -0.17
LRRC8D-202ENST00000394593 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
LRRC8D-202ENST00000394593 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
LRRC8D-202ENST00000394593 CLSPNQ9HAW4 1339 aa13.96□□□□□ -0.17
LRRC8D-202ENST00000394593 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
LRRC8D-202ENST00000394593 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
LRRC8D-202ENST00000394593 CCNB3Q8WWL7 1395 aa13.94□□□□□ -0.18
LRRC8D-202ENST00000394593 IGF1RP08069 1367 aa13.9□□□□□ -0.18
LRRC8D-202ENST00000394593 CUX2O14529 1486 aa13.89□□□□□ -0.19
LRRC8D-202ENST00000394593 NESP48681 1621 aa13.88□□□□□ -0.19
LRRC8D-202ENST00000394593 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
LRRC8D-202ENST00000394593 RAB3GAP2Q9H2M9 1393 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms