Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF103-CHMP3A0A140T963 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF103-CHMP3A0A140T963 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF103-CHMP3A0A140T963 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF103-CHMP3A0A140T963 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF103-CHMP3A0A140T963 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF103-CHMP3A0A140T963 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.39■■□□□ 1.34
RNF103-CHMP3A0A140T963 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.39■■□□□ 1.34
RNF103-CHMP3A0A140T963 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF103-CHMP3A0A140T963 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
RNF103-CHMP3A0A140T963 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF103-CHMP3A0A140T963 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF103-CHMP3A0A140T963 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF103-CHMP3A0A140T963 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF103-CHMP3A0A140T963 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF103-CHMP3A0A140T963 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.37■■□□□ 1.33
RNF103-CHMP3A0A140T963 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RNF103-CHMP3A0A140T963 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF103-CHMP3A0A140T963 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF103-CHMP3A0A140T963 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF103-CHMP3A0A140T963 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF103-CHMP3A0A140T963 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF103-CHMP3A0A140T963 LINC01971-201ENST00000617888 1048 ntBASIC23.35■■□□□ 1.33
RNF103-CHMP3A0A140T963 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF103-CHMP3A0A140T963 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF103-CHMP3A0A140T963 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.34■■□□□ 1.33
RNF103-CHMP3A0A140T963 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF103-CHMP3A0A140T963 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF103-CHMP3A0A140T963 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF103-CHMP3A0A140T963 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
RNF103-CHMP3A0A140T963 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RNF103-CHMP3A0A140T963 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF103-CHMP3A0A140T963 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF103-CHMP3A0A140T963 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF103-CHMP3A0A140T963 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF103-CHMP3A0A140T963 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RNF103-CHMP3A0A140T963 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF103-CHMP3A0A140T963 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF103-CHMP3A0A140T963 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF103-CHMP3A0A140T963 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 AP004609.3-201ENST00000610705 1884 ntBASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF103-CHMP3A0A140T963 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF103-CHMP3A0A140T963 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF103-CHMP3A0A140T963 DUSP8P4-201ENST00000399538 1761 ntBASIC23.3■■□□□ 1.32
RNF103-CHMP3A0A140T963 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
RNF103-CHMP3A0A140T963 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF103-CHMP3A0A140T963 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF103-CHMP3A0A140T963 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF103-CHMP3A0A140T963 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF103-CHMP3A0A140T963 WHAMMP3-201ENST00000611636 1609 ntBASIC23.29■■□□□ 1.32
RNF103-CHMP3A0A140T963 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
RNF103-CHMP3A0A140T963 AC092803.2-201ENST00000564287 1899 ntBASIC23.28■■□□□ 1.32
RNF103-CHMP3A0A140T963 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF103-CHMP3A0A140T963 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RNF103-CHMP3A0A140T963 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF103-CHMP3A0A140T963 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF103-CHMP3A0A140T963 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF103-CHMP3A0A140T963 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
RNF103-CHMP3A0A140T963 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L13-201ENST00000554103 1267 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L15-201ENST00000611059 1267 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L23-201ENST00000615195 1269 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L24-201ENST00000617576 1269 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L22-201ENST00000618238 1269 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L20-201ENST00000619712 1269 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L21-201ENST00000622058 1269 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L10-201ENST00000622460 1267 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 DUX4L25-201ENST00000624915 1269 ntBASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF103-CHMP3A0A140T963 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF103-CHMP3A0A140T963 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF103-CHMP3A0A140T963 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF103-CHMP3A0A140T963 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF103-CHMP3A0A140T963 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF103-CHMP3A0A140T963 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF103-CHMP3A0A140T963 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RNF103-CHMP3A0A140T963 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RNF103-CHMP3A0A140T963 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RNF103-CHMP3A0A140T963 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.23■■□□□ 1.31
RNF103-CHMP3A0A140T963 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.23■■□□□ 1.31
RNF103-CHMP3A0A140T963 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms