RNA–Protein interactions for RNA: ENST00000358792.11

GTPBP3-202, Transcript of GTP binding protein 3, mitochondrial, humanhuman

APPRIS P4 TSL 2 BASIC

Gene GTPBP3, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-202ENST00000358792 NISCHQ9Y2I1 1504 aa52.87■■■■■ 6.05
GTPBP3-202ENST00000358792 CCDC180Q9P1Z9 1646 aa45.73■■■■■ 4.91
GTPBP3-202ENST00000358792 ZCCHC6Q5VYS8 1495 aaKnown RBP44.56■■■■■ 4.72
GTPBP3-202ENST00000358792 DCAF1Q9Y4B6 1507 aa43.71■■■■■ 4.59
GTPBP3-202ENST00000358792 SHROOM4Q9ULL8 1493 aa43.7■■■■■ 4.59
GTPBP3-202ENST00000358792 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
GTPBP3-202ENST00000358792 MYO15BQ96JP2 1530 aa42.9■■■■■ 4.46
GTPBP3-202ENST00000358792 ABCC9O60706 1549 aa42.56■■■■■ 4.4
GTPBP3-202ENST00000358792 SUPT5HO00267 1087 aaKnown RBP42.45■■■■■ 4.39
GTPBP3-202ENST00000358792 NACADO15069 1562 aa42.41■■■■■ 4.38
GTPBP3-202ENST00000358792 SCRIBQ14160 1630 aa42.18■■■■■ 4.34
GTPBP3-202ENST00000358792 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.29
GTPBP3-202ENST00000358792 RSF1Q96T23 1441 aaPredicted RBP41.32■■■■■ 4.2
GTPBP3-202ENST00000358792 UNC13AQ9UPW8 1703 aa41.07■■■■■ 4.17
GTPBP3-202ENST00000358792 CHIC1Q5VXU3 224 aa41.03■■■■■ 4.16
GTPBP3-202ENST00000358792 CECR2Q9BXF3 1484 aa41.02■■■■■ 4.16
GTPBP3-202ENST00000358792 MROH2BQ7Z745 1585 aa40.88■■■■■ 4.14
GTPBP3-202ENST00000358792 BAZ1AQ9NRL2 1556 aaPredicted RBP40.77■■■■■ 4.12
GTPBP3-202ENST00000358792 WIZO95785 1651 aa40.6■■■■■ 4.09
GTPBP3-202ENST00000358792 BICRAQ9NZM4 1560 aa40.59■■■■■ 4.09
GTPBP3-202ENST00000358792 SMARCA4P51532 1647 aa40.48■■■■■ 4.07
GTPBP3-202ENST00000358792 PABPN1Q86U42 306 aaKnown RBP eCLIP40.3■■■■■ 4.04
GTPBP3-202ENST00000358792 TOP2AP11388 1531 aaKnown RBP40.19■■■■■ 4.02
GTPBP3-202ENST00000358792 PEG3Q9GZU2 1588 aa39.94■■■■□ 3.98
GTPBP3-202ENST00000358792 TRIM41Q8WV44 630 aa39.86■■■■□ 3.97
GTPBP3-202ENST00000358792 SMARCA2P51531 1590 aa39.84■■■■□ 3.97
GTPBP3-202ENST00000358792 EIF4G1Q04637 1599 aaKnown RBP39.82■■■■□ 3.96
GTPBP3-202ENST00000358792 CCDC88BA6NC98 1476 aa39.8■■■■□ 3.96
GTPBP3-202ENST00000358792 ATAD2BQ9ULI0 1458 aa39.61■■■■□ 3.93
GTPBP3-202ENST00000358792 LOC105371045A0A1W2PR82 267 aa39.5■■■■□ 3.91
GTPBP3-202ENST00000358792 BAZ1BQ9UIG0 1483 aaKnown RBP39.45■■■■□ 3.91
GTPBP3-202ENST00000358792 ABCC8Q09428 1581 aa39.22■■■■□ 3.87
GTPBP3-202ENST00000358792 HMGXB3Q12766 1538 aa39.16■■■■□ 3.86
GTPBP3-202ENST00000358792 FAM9AQ8IZU1 332 aaPredicted RBP39.15■■■■□ 3.86
GTPBP3-202ENST00000358792 NCAPD3P42695 1498 aa39.14■■■■□ 3.86
GTPBP3-202ENST00000358792 WRNQ14191 1432 aaPredicted RBP eCLIP38.88■■■■□ 3.81
GTPBP3-202ENST00000358792 EEA1Q15075 1411 aa38.75■■■■□ 3.79
GTPBP3-202ENST00000358792 SYNJ1O43426 1573 aa38.68■■■■□ 3.78
GTPBP3-202ENST00000358792 SOGA1O94964 1423 aa38.64■■■■□ 3.78
GTPBP3-202ENST00000358792 EHMT2Q96KQ7 1210 aa38.57■■■■□ 3.76
GTPBP3-202ENST00000358792 CC2D2AQ9P2K1 1620 aa38.54■■■■□ 3.76
GTPBP3-202ENST00000358792 PCGF6Q9BYE7 350 aa38.53■■■■□ 3.76
GTPBP3-202ENST00000358792 CFTRP13569 1480 aa38.5■■■■□ 3.75
GTPBP3-202ENST00000358792 TOP2BQ02880 1626 aa38.48■■■■□ 3.75
GTPBP3-202ENST00000358792 CSRNP3Q8WYN3 585 aa38.46■■■■□ 3.75
GTPBP3-202ENST00000358792 RUSC2Q8N2Y8 1516 aa38.45■■■■□ 3.75
GTPBP3-202ENST00000358792 BIVM-ERCC5R4GMW8 1640 aa38.42■■■■□ 3.74
GTPBP3-202ENST00000358792 PRDM2Q13029 1718 aa38.36■■■■□ 3.73
GTPBP3-202ENST00000358792 TRIM26Q12899 539 aaPredicted RBP38.35■■■■□ 3.73
GTPBP3-202ENST00000358792 TNIKQ9UKE5 1360 aa38.28■■■■□ 3.72
GTPBP3-202ENST00000358792 GOLGA3Q08378 1498 aa38.25■■■■□ 3.71
GTPBP3-202ENST00000358792 CADPSQ9ULU8 1353 aa38.2■■■■□ 3.71
GTPBP3-202ENST00000358792 KIF21BO75037 1637 aa38.2■■■■□ 3.71
GTPBP3-202ENST00000358792 CUX1P39880 1505 aa38.17■■■■□ 3.7
GTPBP3-202ENST00000358792 CEP164Q9UPV0 1460 aa38.17■■■■□ 3.7
GTPBP3-202ENST00000358792 CEP162Q5TB80 1403 aa38.12■■■■□ 3.69
GTPBP3-202ENST00000358792 HRCP23327 699 aa38.07■■■■□ 3.68
GTPBP3-202ENST00000358792 UBTFP17480 764 aaKnown RBP38.05■■■■□ 3.68
GTPBP3-202ENST00000358792 KIF27Q86VH2 1401 aa37.83■■■■□ 3.65
GTPBP3-202ENST00000358792 RAPGEF2Q9Y4G8 1499 aa37.82■■■■□ 3.65
GTPBP3-202ENST00000358792 ERICH3Q5RHP9 1530 aa37.8■■■■□ 3.64
GTPBP3-202ENST00000358792 FANCD2Q9BXW9 1451 aa37.79■■■■□ 3.64
GTPBP3-202ENST00000358792 PRXQ9BXM0 1461 aa37.76■■■■□ 3.63
GTPBP3-202ENST00000358792 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.62
GTPBP3-202ENST00000358792 CLIP1P30622 1438 aa37.65■■■■□ 3.62
GTPBP3-202ENST00000358792 FGD5Q6ZNL6 1462 aa37.64■■■■□ 3.62
GTPBP3-202ENST00000358792 NESP48681 1621 aa37.61■■■■□ 3.61
GTPBP3-202ENST00000358792 DNMBPQ6XZF7 1577 aa37.6■■■■□ 3.61
GTPBP3-202ENST00000358792 PPARGC1BQ86YN6 1023 aaKnown RBP37.58■■■■□ 3.61
GTPBP3-202ENST00000358792 CUX2O14529 1486 aa37.55■■■■□ 3.6
GTPBP3-202ENST00000358792 TOPBP1Q92547 1522 aa37.47■■■■□ 3.59
GTPBP3-202ENST00000358792 VPS8Q8N3P4 1428 aa37.44■■■■□ 3.58
GTPBP3-202ENST00000358792 IGF1RP08069 1367 aa37.4■■■■□ 3.58
GTPBP3-202ENST00000358792 PDS5BQ9NTI5 1447 aa37.38■■■■□ 3.57
GTPBP3-202ENST00000358792 POLA1P09884 1462 aaPredicted RBP37.34■■■■□ 3.57
GTPBP3-202ENST00000358792 ABCA10Q8WWZ4 1543 aa37.32■■■■□ 3.57
GTPBP3-202ENST00000358792 DNAJC5BQ9UF47 199 aa37.3■■■■□ 3.56
GTPBP3-202ENST00000358792 URB2Q14146 1524 aaKnown RBP37.27■■■■□ 3.56
GTPBP3-202ENST00000358792 ZEB1P37275 1124 aaPredicted RBP37.25■■■■□ 3.55
GTPBP3-202ENST00000358792 CARMIL1Q5VZK9 1371 aa37.24■■■■□ 3.55
GTPBP3-202ENST00000358792 RAD54L2Q9Y4B4 1467 aa37.23■■■■□ 3.55
GTPBP3-202ENST00000358792 RANGAP1P46060 587 aaPredicted RBP37.18■■■■□ 3.54
GTPBP3-202ENST00000358792 ARAP1Q96P48 1450 aa37.18■■■■□ 3.54
GTPBP3-202ENST00000358792 KIF21AQ7Z4S6 1674 aa37.17■■■■□ 3.54
GTPBP3-202ENST00000358792 WDR97A6NE52 1622 aa37.13■■■■□ 3.53
GTPBP3-202ENST00000358792 APLP2Q06481 763 aa37.13■■■■□ 3.53
GTPBP3-202ENST00000358792 TTBK1Q5TCY1 1321 aaPredicted RBP37.12■■■■□ 3.53
GTPBP3-202ENST00000358792 CUL7Q14999 1698 aa37.07■■■■□ 3.52
GTPBP3-202ENST00000358792 ARHGAP35Q9NRY4 1499 aa37.03■■■■□ 3.52
GTPBP3-202ENST00000358792 ABCA5Q8WWZ7 1642 aa36.96■■■■□ 3.51
GTPBP3-202ENST00000358792 MRC2Q9UBG0 1479 aa36.85■■■■□ 3.49
GTPBP3-202ENST00000358792 GAPVD1Q14C86 1478 aa36.85■■■■□ 3.49
GTPBP3-202ENST00000358792 TARBP1Q13395 1621 aaKnown RBP36.84■■■■□ 3.49
GTPBP3-202ENST00000358792 TDRD9Q8NDG6 1382 aaKnown RBP36.8■■■■□ 3.48
GTPBP3-202ENST00000358792 CTTNBP2Q8WZ74 1663 aa36.77■■■■□ 3.48
GTPBP3-202ENST00000358792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.72■■■■□ 3.47
GTPBP3-202ENST00000358792 CCER1Q8TC90 406 aaPredicted RBP36.71■■■■□ 3.47
GTPBP3-202ENST00000358792 EFCAB5A4FU69 1503 aa36.69■■■■□ 3.46
GTPBP3-202ENST00000358792 MAP3K1Q13233 1512 aa36.66■■■■□ 3.46
GTPBP3-202ENST00000358792 FHAD1B1AJZ9 1412 aa36.64■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms