RNA–Protein interactions for RNA: ENST00000449224.1

CRTAP-202, Transcript of cartilage associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CRTAP, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-202ENST00000449224 NISCHQ9Y2I1 1504 aa57.09■■■■■ 6.73
CRTAP-202ENST00000449224 CCDC180Q9P1Z9 1646 aa50■■■■■ 5.59
CRTAP-202ENST00000449224 ZCCHC6Q5VYS8 1495 aaKnown RBP47.88■■■■■ 5.25
CRTAP-202ENST00000449224 ABCC9O60706 1549 aa47.66■■■■■ 5.22
CRTAP-202ENST00000449224 DCAF8L2P0C7V8 631 aa47.28■■■■■ 5.16
CRTAP-202ENST00000449224 DCAF1Q9Y4B6 1507 aa47.21■■■■■ 5.15
CRTAP-202ENST00000449224 MYO15BQ96JP2 1530 aa46.82■■■■■ 5.09
CRTAP-202ENST00000449224 NACADO15069 1562 aa46.68■■■■■ 5.06
CRTAP-202ENST00000449224 RB1CC1Q8TDY2 1594 aa46.38■■■■■ 5.02
CRTAP-202ENST00000449224 SHROOM4Q9ULL8 1493 aa46.24■■■■■ 4.99
CRTAP-202ENST00000449224 SCRIBQ14160 1630 aa45.91■■■■■ 4.94
CRTAP-202ENST00000449224 UNC13AQ9UPW8 1703 aa45.39■■■■■ 4.86
CRTAP-202ENST00000449224 BICRAQ9NZM4 1560 aa44.97■■■■■ 4.79
CRTAP-202ENST00000449224 PABPN1Q86U42 306 aaKnown RBP eCLIP44.85■■■■■ 4.77
CRTAP-202ENST00000449224 CECR2Q9BXF3 1484 aa44.39■■■■■ 4.7
CRTAP-202ENST00000449224 SUPT5HO00267 1087 aaKnown RBP44.27■■■■■ 4.68
CRTAP-202ENST00000449224 BAZ1AQ9NRL2 1556 aaPredicted RBP44.13■■■■■ 4.66
CRTAP-202ENST00000449224 RSF1Q96T23 1441 aaPredicted RBP44.11■■■■■ 4.65
CRTAP-202ENST00000449224 MROH2BQ7Z745 1585 aa44.09■■■■■ 4.65
CRTAP-202ENST00000449224 SMARCA4P51532 1647 aa43.98■■■■■ 4.63
CRTAP-202ENST00000449224 WIZO95785 1651 aa43.7■■■■■ 4.59
CRTAP-202ENST00000449224 EIF4G1Q04637 1599 aaKnown RBP43.67■■■■■ 4.58
CRTAP-202ENST00000449224 PEG3Q9GZU2 1588 aa43.47■■■■■ 4.55
CRTAP-202ENST00000449224 ATAD2BQ9ULI0 1458 aa43.37■■■■■ 4.53
CRTAP-202ENST00000449224 SMARCA2P51531 1590 aa43.34■■■■■ 4.53
CRTAP-202ENST00000449224 TOP2AP11388 1531 aaKnown RBP43.25■■■■■ 4.51
CRTAP-202ENST00000449224 CC2D2AQ9P2K1 1620 aa43.12■■■■■ 4.49
CRTAP-202ENST00000449224 BAZ1BQ9UIG0 1483 aaKnown RBP43.11■■■■■ 4.49
CRTAP-202ENST00000449224 NCAPD3P42695 1498 aa43.08■■■■■ 4.49
CRTAP-202ENST00000449224 HMGXB3Q12766 1538 aa42.98■■■■■ 4.47
CRTAP-202ENST00000449224 CCDC88BA6NC98 1476 aa42.79■■■■■ 4.44
CRTAP-202ENST00000449224 DNAJC5BQ9UF47 199 aa42.41■■■■■ 4.38
CRTAP-202ENST00000449224 CHIC1Q5VXU3 224 aa42.14■■■■■ 4.34
CRTAP-202ENST00000449224 CFTRP13569 1480 aa42■■■■■ 4.31
CRTAP-202ENST00000449224 CADPSQ9ULU8 1353 aa41.94■■■■■ 4.3
CRTAP-202ENST00000449224 ABCC8Q09428 1581 aa41.74■■■■■ 4.27
CRTAP-202ENST00000449224 PRDM2Q13029 1718 aa41.74■■■■■ 4.27
CRTAP-202ENST00000449224 NESP48681 1621 aa41.7■■■■■ 4.27
CRTAP-202ENST00000449224 LAMC3Q9Y6N6 1575 aa41.69■■■■■ 4.26
CRTAP-202ENST00000449224 TRIM41Q8WV44 630 aa41.67■■■■■ 4.26
CRTAP-202ENST00000449224 WRNQ14191 1432 aaPredicted RBP eCLIP41.54■■■■■ 4.24
CRTAP-202ENST00000449224 FANCD2Q9BXW9 1451 aa41.48■■■■■ 4.23
CRTAP-202ENST00000449224 SYNJ1O43426 1573 aa41.38■■■■■ 4.22
CRTAP-202ENST00000449224 PDS5BQ9NTI5 1447 aa41.38■■■■■ 4.21
CRTAP-202ENST00000449224 CEP164Q9UPV0 1460 aa41.26■■■■■ 4.2
CRTAP-202ENST00000449224 TOP2BQ02880 1626 aa41.26■■■■■ 4.2
CRTAP-202ENST00000449224 CUX1P39880 1505 aa41.25■■■■■ 4.19
CRTAP-202ENST00000449224 BIVM-ERCC5R4GMW8 1640 aa41.22■■■■■ 4.19
CRTAP-202ENST00000449224 KIF21AQ7Z4S6 1674 aa41.2■■■■■ 4.19
CRTAP-202ENST00000449224 DNMBPQ6XZF7 1577 aa41.03■■■■■ 4.16
CRTAP-202ENST00000449224 URB2Q14146 1524 aaKnown RBP40.98■■■■■ 4.15
CRTAP-202ENST00000449224 TOPBP1Q92547 1522 aa40.98■■■■■ 4.15
CRTAP-202ENST00000449224 ERCC6Q03468 1493 aa40.92■■■■■ 4.14
CRTAP-202ENST00000449224 FAM9AQ8IZU1 332 aaPredicted RBP40.88■■■■■ 4.14
CRTAP-202ENST00000449224 FGD5Q6ZNL6 1462 aa40.88■■■■■ 4.13
CRTAP-202ENST00000449224 SOGA1O94964 1423 aa40.87■■■■■ 4.13
CRTAP-202ENST00000449224 MRC2Q9UBG0 1479 aa40.87■■■■■ 4.13
CRTAP-202ENST00000449224 POLA1P09884 1462 aaPredicted RBP40.75■■■■■ 4.11
CRTAP-202ENST00000449224 RUSC2Q8N2Y8 1516 aa40.74■■■■■ 4.11
CRTAP-202ENST00000449224 EEA1Q15075 1411 aa40.72■■■■■ 4.11
CRTAP-202ENST00000449224 WDR62O43379 1518 aa40.68■■■■■ 4.1
CRTAP-202ENST00000449224 THOC2Q8NI27 1593 aaKnown RBP40.65■■■■■ 4.1
CRTAP-202ENST00000449224 RAD54L2Q9Y4B4 1467 aa40.6■■■■■ 4.09
CRTAP-202ENST00000449224 KIF27Q86VH2 1401 aa40.54■■■■■ 4.08
CRTAP-202ENST00000449224 CUX2O14529 1486 aa40.53■■■■■ 4.08
CRTAP-202ENST00000449224 CSRNP3Q8WYN3 585 aa40.53■■■■■ 4.08
CRTAP-202ENST00000449224 LOC105371045A0A1W2PR82 267 aa40.51■■■■■ 4.07
CRTAP-202ENST00000449224 ABCA10Q8WWZ4 1543 aa40.5■■■■■ 4.07
CRTAP-202ENST00000449224 WDR97A6NE52 1622 aa40.42■■■■■ 4.06
CRTAP-202ENST00000449224 TARBP1Q13395 1621 aaKnown RBP40.4■■■■■ 4.06
CRTAP-202ENST00000449224 EHMT2Q96KQ7 1210 aa40.31■■■■■ 4.04
CRTAP-202ENST00000449224 IFT140Q96RY7 1462 aa40.3■■■■■ 4.04
CRTAP-202ENST00000449224 TDRD9Q8NDG6 1382 aaKnown RBP40.25■■■■■ 4.03
CRTAP-202ENST00000449224 ABCA5Q8WWZ7 1642 aa40.22■■■■■ 4.03
CRTAP-202ENST00000449224 IGF1RP08069 1367 aa40.21■■■■■ 4.03
CRTAP-202ENST00000449224 KIF21BO75037 1637 aa40.21■■■■■ 4.03
CRTAP-202ENST00000449224 GAPVD1Q14C86 1478 aa40.16■■■■■ 4.02
CRTAP-202ENST00000449224 PRXQ9BXM0 1461 aa40.15■■■■■ 4.02
CRTAP-202ENST00000449224 GOLGA3Q08378 1498 aa40.14■■■■■ 4.02
CRTAP-202ENST00000449224 ZNF608Q9ULD9 1512 aaPredicted RBP40.09■■■■■ 4.01
CRTAP-202ENST00000449224 RAPGEF2Q9Y4G8 1499 aa40.07■■■■■ 4
CRTAP-202ENST00000449224 AQRO60306 1485 aaKnown RBP eCLIP40.06■■■■■ 4
CRTAP-202ENST00000449224 ERICH3Q5RHP9 1530 aa40.03■■■■■ 4
CRTAP-202ENST00000449224 CARMIL1Q5VZK9 1371 aa40.01■■■■■ 4
CRTAP-202ENST00000449224 UBTFP17480 764 aaKnown RBP39.98■■■■□ 3.99
CRTAP-202ENST00000449224 PBRM1Q86U86 1689 aa39.96■■■■□ 3.99
CRTAP-202ENST00000449224 EIF4G3O43432 1585 aaKnown RBP39.96■■■■□ 3.99
CRTAP-202ENST00000449224 CUL7Q14999 1698 aa39.95■■■■□ 3.99
CRTAP-202ENST00000449224 GRIN2BQ13224 1484 aa39.92■■■■□ 3.98
CRTAP-202ENST00000449224 TNIKQ9UKE5 1360 aa39.91■■■■□ 3.98
CRTAP-202ENST00000449224 ADAMTS12P58397 1594 aa39.72■■■■□ 3.95
CRTAP-202ENST00000449224 FHAD1B1AJZ9 1412 aa39.72■■■■□ 3.95
CRTAP-202ENST00000449224 SNAPC4Q5SXM2 1469 aa39.7■■■■□ 3.95
CRTAP-202ENST00000449224 CEP162Q5TB80 1403 aa39.67■■■■□ 3.94
CRTAP-202ENST00000449224 MAGI1Q96QZ7 1491 aaPredicted RBP39.63■■■■□ 3.93
CRTAP-202ENST00000449224 SYNJ2O15056 1496 aa39.48■■■■□ 3.91
CRTAP-202ENST00000449224 CLIP1P30622 1438 aa39.47■■■■□ 3.91
CRTAP-202ENST00000449224 RANGAP1P46060 587 aaPredicted RBP39.45■■■■□ 3.91
CRTAP-202ENST00000449224 CTTNBP2Q8WZ74 1663 aa39.44■■■■□ 3.9
CRTAP-202ENST00000449224 GRIN2AQ12879 1464 aa39.43■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms